BAC Information

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BAC

Clone NameB6Ng01-088M09
Chromosome14 (Build37)
Map Location 15,126,651 - 15,127,396
singlet/doubletsinglet
Overlap genenone
Upstream geneSynpr, A430083B19Rik, EG382844, LOC100042045, Gm281, Thoc7, Atxn7, Psmd6, Olfr720, LOC667125, LOC100042543
Downstream geneOlfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088M09.bB6Ng01-088M09.g
ACCDH901538DH901539
length1,270983
definitionDH901538|Mus musculus domesticus DNA, BAC clone: B6Ng01-088M09, 5' end.DH901539|Mus musculus domesticus DNA, BAC clone: B6Ng01-088M09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgggcactgctagcttctgcagactctggatacctgtgttggc
gaccttagctgccccattgttccccctaaccaaggaaggggaggtgtttg
tgtggaccccagatcaccagaaagcctttaaagaaattaaaaaggcccta
ctgatggccagccttggccttgcttgacctaaccaagcctttcactcttt
atgtggaagagagagcaggggtcaccagaggagtccttactcagactttg
ggaccttgaaaaaggccagtggcttaccaatccaagaagttagacccttt
tgccagggatggttttcttacctgaaagctaatgctgccatagctctgtt
tgtcaaggatgctgataatctcactctgggacagcaaatgactatagtgg
caccccacactcttgaaagcattatccaacagtccccctgactgacggat
gaccaactctcatacgacacattatcagagctttgattgactgaatgagt
gatcttcgctccccctgctgtcctcaattctgctaccctactgcctgagt
cttcacctattcatcactgtgctgacattcggcagaagaaactggttctc
gaaatgatctgaaggaacagatcagccttgacctgggagttcgagctggt
acatggatggcagtagcttcatggttgaaggtaagcagaaggtgggggca
gcagtgcagtggtggacagaaagcaagtgatctaggccagcagcctccct
gaagggactttggcccagaaagctgaacttgtggctttgatacaagcttt
atgaatggcaagaaggaagtctatcaacatttacactgatagcaggtatg
cttttgccactgtacggagcaatataccgacaaagagggctgttgacatc
tgcagagaaagacctaagatgctgtggctaaatggaatcagatggcagat
ctaactgccaagcaagcggcccaaggagcaatgatcctggcagtcaggag
cctaaagattattatgacatcagagagaccagctttagatacactccttg
aagactattcagttatggacaattaggactagtaaaggaaactcttgtat
ggagtagtggacggaggagactagtcctccatgggagaaagatgcagaat
gtttaccacttcttactgaaccatctggggccatgaattaagctgtaggt
cctcacctcatatgttttaggatctctgacttagccgagaaaatgtcaaa
accgtccaaggcgtcggtgt
gaattctctacttttcttggtcagggggtacaagggggcagccagtgttg
caaacccaggtatccaaagtcttcagaacctagcagtgcccaagaattct
ctcacctgtcttgaagtagccggtatttgagtcacagtcctttttctttg
caatagacacattggtccttccctaaagtcttctggaccggtcttattcc
tccaggtctaggttccctgttgcccaggtaccctgtctgtctattctctg
gcctgttccttcttttatgctcccctactactgcagccaaaattctgttt
aaattcctctcctgtcttctatctctcttattctccctctcttcttcttc
atgcttttccctctcttctcttctataagcttccatcaatctttccagaa
aaacagatgggggctcggtagggccctgcatcacctctcttatcttagcc
aaattggtggggcgtctcaccactccctttagaccagagcctgggggtaa
actgctaacctctccctaccttgagccgtgttgtagttccaatctggcca
gtccagagggaacccagcattccaattgtacagatatgcagagattgtgg
gtccatgggcaggtcgcccacagctcgcaaaggaaaagcagaagtggtgc
caggagctccatctgctgggggactctgggcttgttggctctgggtcctg
gcagccagtcctccggctgtgcctccagtgatcccagggccaggcgcagg
gacctgcagaggagcgggaaccagccggagtagaagttagggcagagggg
gagggacttaggggagctgtgggttgaagaggagctcccttttgggagga
ccttttggtttcacttttgttcagaagagtcagactcggagctgactttg
ctggggatccatggtttccctgcagacagtaacatgacaaccacgaaaaa
caaaacagaccattaaaaataacgcaccacgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_15126651_15127396
seq2: B6Ng01-088M09.g_326_1051

seq1  CCTTCTTTTATGCTCCCCTACTACTGCAGCCAAAATTCTGTTTAAATTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTTTATGCTCCCCTACTACTGCAGCCAAAATTCTGTTTAAATTCC  50

seq1  TCTCCTGTCTTCTATCTCTCTTATTCTCCCTCTCTTCTTCTTCATGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGTCTTCTATCTCTCTTATTCTCCCTCTCTTCTTCTTCATGCTTT  100

seq1  TCCCTCTCTTCTCTTCTATAAGCTTCCATCAATCTTTCCAGAAAAACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCTTCTCTTCTATAAGCTTCCATCAATCTTTCCAGAAAAACAGA  150

seq1  TGGGGGCTCGGTAGGGCCCTGCATCACCTCTCTTATCTTAGCCAAATTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCTCGGTAGGGCCCTGCATCACCTCTCTTATCTTAGCCAAATTGG  200

seq1  TGGGGCGTCTCACCACTCCCTTTAGACCAGAGCCTGGGGGTAAACTGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCGTCTCACCACTCCCTTTAGACCAGAGCCTGGGGGTAAACTGCTA  250

seq1  ACCTCTCCCTACCTTGAGCCGTGTTGTAGTTCCAATCTGGCCAGTCCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCCCTACCTTGAGCCGTGTTGTAGTTCCAATCTGGCCAGTCCAGA  300

seq1  GGGAACCCAGCATTCCAATTGTACAGATATGCAGAGATTGTGGGTCCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACCCAGCATTCCAATTGTACAGATATGCAGAGATTGTGGGTCCATG  350

seq1  GGCAGGTCGCCCACAGCTCGCAAAGGAAAAGCAGAAGTGGTGCCAGGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTCGCCCACAGCTCGCAAAGGAAAAGCAGAAGTGGTGCCAGGAGC  400

seq1  TCCATCTGCTGGGGGACTCTGGGCTTGTTGGCTCTGGGTCCTGGCAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCTGCTGGGGGACTCTGGGCTTGTTGGCTCTGGGTCCTGGCAGCCA  450

seq1  GTCCTCCGGCTGTGCCTCCAGTGATCCCAGGGCCAGGCGCAGGGACCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCGGCTGTGCCTCCAGTGATCCCAGGGCCAGGCGCAGGGACCTGC  500

seq1  AGAGGAGCGGGAACCAGCCGGAGTAGAAGTTAGGGCAGAGGGGGAGGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGCGGGAACCAGCCGGAGTAGAAGTTAGGGCAGAGGGGGAGGGAC  550

seq1  TTAGGGGAGCTGTGGGTTGAAGAGGAGGCTCCCTTTTGGGAGGAACCTTT  600
      |||||||||||||||||||||||||| |||||||||||||||| ||||||
seq2  TTAGGGGAGCTGTGGGTTGAAGAGGA-GCTCCCTTTTGGGAGG-ACCTTT  598

seq1  TGGTTTCACTTTTGTTTCAAGAAGAGTCAGGACTCGGGAGCCTGACCTTT  650
      ||||||||||||||||   |||||||||| ||||| |||| |||| ||||
seq2  TGGTTTCACTTTTGTT--CAGAAGAGTCA-GACTC-GGAG-CTGA-CTTT  642

seq1  GCTGGGGAATCCATGGTTTCCCTGCCAGACAGTAAACAATGACAAACCAC  700
      ||||||| |||||||||||||||| ||||||||||   ||||| ||||||
seq2  GCTGGGG-ATCCATGGTTTCCCTG-CAGACAGTAA--CATGAC-AACCAC  687

seq1  AGAAAACACAAAACAGACACATTAAAAAAATAAACGCACACACGAA  746
       ||||| ||||||||||| |||||||||    ||||||| ||||||
seq2  -GAAAA-ACAAAACAGAC-CATTAAAAA---TAACGCAC-CACGAA  726