BAC Information

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BAC

Clone NameB6Ng01-089G22
Chromosome14 (Build37)
Map Location 27,075,720 - 27,248,765
singlet/doubletdoublet
Overlap geneLOC100039293, LOC100039527, LOC100039538, 4933413J09Rik, Slmap
Upstream geneZmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280
Downstream geneLOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089G22.bB6Ng01-089G22.g
ACCDH902012DH902013
length3041,146
definitionDH902012|Mus musculus domesticus DNA, BAC clone: B6Ng01-089G22, 5' end.DH902013|Mus musculus domesticus DNA, BAC clone: B6Ng01-089G22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,248,462 - 27,248,765)(27,075,720 - 27,076,860)
sequence
ctaactacttcctttcctgattcgtaaaaacattactatgtggatgagct
tatcttaaggtgcctaccgctcagtggaaggccagcctacctggcttttg
tccccagaactgcagaaatatttgtttctcttgaatctattatacgcgat
acaggctaatgtttaattacaatgaaaaaatattttagcaatcagccatt
attttgtatttactgtgtgcttgacagtaaacacaagaattttgtgtttg
gagtttttgttgttgttgttgttgttgttgttttagttttgtgtatgatt
ttta
gaattcaatttaatgccctcttctggcctacagtagagcactcatacatt
aaataaataatttttttttaaagtgatagggctagagagagggctaagtg
gataagattatcttctggatgatcacaaggccctgagctcagatcctagc
ttctgtgtatcaagctgggtatccagtatatgccagtaaccccaactcca
aggagtacagagacaggaggattgctgggacttgctggaccttagtatag
ctgagaacatgatccccaagttgggaagagaccctgcctcaaaggaatag
ttagagaggaagagaggaagacacccagtgccttcttctggcctccacgt
atacacagaggttcctgaattcatacacgtaggcacatacacacaaatgt
atgtgtatacaagcattgtaggcacacacacacaaatgtatgtgtataca
agcattgtaggcacacacacacaaagacatcatctagaccagattggcta
ttgcatccttgaacactcagtagctgtgacctgtattagactgagctggt
tcacattctaccatgaggggaaagggtcttcaggggccttgctgcttctt
gaggatgtagacagtcagtgcctgcttgcagagggagagatgctttccac
aacggcatagtcactggtaagtttgaaaaaacaggcccaagctcagcatc
cgttctctgtttcctgagtgtggacacagtatggccagctacatgcagct
tgtcccacccgcccctttctgccatgatggtctgcacttcctggactggg
aaggcaaagttaccctgtccttaaattgctcttgtcagatattctgtctt
agcagcaagacaagcaactgggggtgaatagcatcacactatatacatgc
atggaaaagacacagggaactcatcggtttatgtataattatacgtacca
ataaaaagttttacattgccgggcgtggttgccgcacgctttaatccagc
catcgggaggcaaagcaggcggattttgatttcgaggccggcttgtcttc
agaggtaattccaaggaacagccatagactatacgaagaaaccctgttct
caaacaaccaaacaaaaagatttacatttcctaaagtaactaataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_27248462_27248765
seq2: B6Ng01-089G22.b_56_359 (reverse)

seq1  TAAAAATCATACACAAAACTAAAACAACAACAACAACAACAACAACAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATCATACACAAAACTAAAACAACAACAACAACAACAACAACAAAA  50

seq1  ACTCCAAACACAAAATTCTTGTGTTTACTGTCAAGCACACAGTAAATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAAACACAAAATTCTTGTGTTTACTGTCAAGCACACAGTAAATACA  100

seq1  AAATAATGGCTGATTGCTAAAATATTTTTTCATTGTAATTAAACATTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGGCTGATTGCTAAAATATTTTTTCATTGTAATTAAACATTAGC  150

seq1  CTGTATCGCGTATAATAGATTCAAGAGAAACAAATATTTCTGCAGTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCGCGTATAATAGATTCAAGAGAAACAAATATTTCTGCAGTTCTG  200

seq1  GGGACAAAAGCCAGGTAGGCTGGCCTTCCACTGAGCGGTAGGCACCTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAAAAGCCAGGTAGGCTGGCCTTCCACTGAGCGGTAGGCACCTTAA  250

seq1  GATAAGCTCATCCACATAGTAATGTTTTTACGAATCAGGAAAGGAAGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGCTCATCCACATAGTAATGTTTTTACGAATCAGGAAAGGAAGTAG  300

seq1  TTAG  304
      ||||
seq2  TTAG  304

seq1: chr14_27075720_27076860
seq2: B6Ng01-089G22.g_70_1215

seq1  GAATTCAATCTAATGCCCTCTTCTGGCCTACAGTAGAGCACTCATACATT  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTAATGCCCTCTTCTGGCCTACAGTAGAGCACTCATACATT  50

seq1  AAATAAATAATTTTTTTTTAAAGTGATAGGGCTAGAGAGAGGGCTAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAATTTTTTTTTAAAGTGATAGGGCTAGAGAGAGGGCTAAGTG  100

seq1  GATAAGATTATCTTCTGGATGATCACAAGGCCCTGAGCTCAGATCCTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGATTATCTTCTGGATGATCACAAGGCCCTGAGCTCAGATCCTAGC  150

seq1  TTCTGTGTATCAAGCTGGGTATCCAGTATATGCCAGTAACCCCAACTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTATCAAGCTGGGTATCCAGTATATGCCAGTAACCCCAACTCCA  200

seq1  AGGAGTACAGAGACAGGAGGATTGCTGGGACTTGCTGGACCTTAGTATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTACAGAGACAGGAGGATTGCTGGGACTTGCTGGACCTTAGTATAG  250

seq1  CTGAGAACATGATCCCCAAGTTGGGAAGAGACCCTGCCTCAAAGGAATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAACATGATCCCCAAGTTGGGAAGAGACCCTGCCTCAAAGGAATAG  300

seq1  TTAGAGAGGAAGAGAGGAAGACACCCAGTGCCTTCTTCTGGCCTCCACGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAGGAAGAGAGGAAGACACCCAGTGCCTTCTTCTGGCCTCCACGT  350

seq1  ATACACAGAGGTTCCTGAATTCATACACGTAGGCACATACACACAAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAGAGGTTCCTGAATTCATACACGTAGGCACATACACACAAATGT  400

seq1  ATGTGTATACAAGCATTGTAGGCACACACACACAAATGTATGTGTATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATACAAGCATTGTAGGCACACACACACAAATGTATGTGTATACA  450

seq1  AGCATTGTAGGCACACACACACAAAGACATCATCTAGACCAGATTGGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGTAGGCACACACACACAAAGACATCATCTAGACCAGATTGGCTA  500

seq1  TTGCATCCTTGAACACTCAGTAGCTGTGACCTGTATTAGACTGAGCTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATCCTTGAACACTCAGTAGCTGTGACCTGTATTAGACTGAGCTGGT  550

seq1  TCACATTCTACCATGAGGGGAAAGGGTCTTCAGGGGCCTTGCTGCTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTCTACCATGAGGGGAAAGGGTCTTCAGGGGCCTTGCTGCTTCTT  600

seq1  GAGGATGTAGACAGTCAGTGCCTGCTTGCAGAGGGAGAGATGCTTTCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGTAGACAGTCAGTGCCTGCTTGCAGAGGGAGAGATGCTTTCCAC  650

seq1  AACGGCATAGTCACTGGTAAG-TTGAAAAAACAGG-CCAAGCTCAGCATC  698
      ||||||||||||||||||||| ||||||||||||| ||||||||||||||
seq2  AACGGCATAGTCACTGGTAAGTTTGAAAAAACAGGCCCAAGCTCAGCATC  700

seq1  CGTTCTCTGTTTCCTGAGTGTGGACACAGTATGGCCAGCTACATGCAGCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTCTGTTTCCTGAGTGTGGACACAGTATGGCCAGCTACATGCAGCT  750

seq1  TGTCCCA-CCGCCCCTTTCCTGCCATGATGGTCTGCACTTCCTGGGACT-  796
      ||||||| |||||||||| |||||||||||||||||||||||| ||||| 
seq2  TGTCCCACCCGCCCCTTT-CTGCCATGATGGTCTGCACTTCCT-GGACTG  798

seq1  GGAAGGCAAAGTTACCCTGTCCTTAAATTGCTCTTGTCAGATATTCTGTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCAAAGTTACCCTGTCCTTAAATTGCTCTTGTCAGATATTCTGTC  848

seq1  TCAGCAGCAAGACAAGCAACT-GGGGTGAATAGCATCACACTATATACAT  895
      | ||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTAGCAGCAAGACAAGCAACTGGGGGTGAATAGCATCACACTATATACAT  898

seq1  GCATGGAAAAGACACAGGGAAACCCATC-GTTTATGTATAATTAATACGT  944
      ||||||||||||||||||| ||| |||| |||||||||||||| ||||||
seq2  GCATGGAAAAGACACAGGG-AACTCATCGGTTTATGTATAATT-ATACGT  946

seq1  ACCAATAAAAAGTTTTACATTGCCGGGCGTGG-TGGCGCACGCCTTTAAT  993
      |||||||||||||||||||||||||||||||| || |||||| |||||||
seq2  ACCAATAAAAAGTTTTACATTGCCGGGCGTGGTTGCCGCACG-CTTTAAT  995

seq1  CCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCGGC  1043
       |||||  |||||||||| | |||||||||||| ||| ||||||||||| 
seq2  -CCAGCCATCGGGAGGCA-AAGCAGGCGGATTT-TGATTTCGAGGCCGG-  1041

seq1  CTGGTCTACAGAGTGAGTTCCA--GGACAGCCAGAG-CTATACAGAGAAA  1090
      || |||| |||||  | |||||  | ||||||| || ||||||  |||||
seq2  CTTGTCTTCAGAGGTAATTCCAAGGAACAGCCATAGACTATACGAAGAAA  1091

seq1  CCCTG-TCTCAAACAAACAAACAAAAAAGTTTTACA-TTCATAAAGT---  1135
      ||||| |||||||||| ||||| |||||| |||||| ||| ||||||   
seq2  CCCTGTTCTCAAACAACCAAAC-AAAAAGATTTACATTTCCTAAAGTAAC  1140

seq1  TAATAA  1141
      ||||||
seq2  TAATAA  1146