BAC Information

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BAC

Clone NameB6Ng01-089P24
Chromosome14 (Build37)
Map Location 3,661,114 - 3,662,247
singlet/doubletsinglet
Overlap geneLOC100040807
Upstream geneLOC100040452, LOC100040657, LOC100040671, LOC100040682, LOC100040697, LOC544990, D830030K20Rik, LOC236565, LOC100040740, LOC100040755, LOC100040767, LOC100040779, LOC100038846, EG666890, LOC100040544, LOC100040797, LOC100040555, LOC100040565, LOC100040578
Downstream geneLOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089P24.bB6Ng01-089P24.g
ACCDH902420DH902421
length8751,121
definitionDH902420|Mus musculus domesticus DNA, BAC clone: B6Ng01-089P24, 5' end.DH902421|Mus musculus domesticus DNA, BAC clone: B6Ng01-089P24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtattggattttg
tcaaatgctttttcagcatctaatgagataatcatgtgtttttttttttt
tctttgatttggtttatattgtgatttacgctgatggatttgcgtatatt
aaaccatccctgcatccctgggatccagcctacttggtcatgatggatga
ttgtcttgatgtgttcttggattcggtttgtgaggattttattaagtatt
tttgcatccatggtcataagagaaattggtctgaagttctctttctttct
tggatctttgtgtggtttaggtatcagagtaattgtggcttcatagaaag
aattgggtagagtgccttctgtttctattttgtggaatagtttgaggaga
gttggaatcaggtcttcttcgaaggtctgctagaactttgcactaaacct
gtcaggtcctggactttttggggctgggagactattgatgactgcttcta
tttctttagggaaatgagagtgtttacatcgttaatctgattctgattta
actttggtatctggtatctgtctaggaagttgtttatttcatacaggttt
tcagttttcctgagtatagccttttgtagtaggatctgatgatgttttgg
attttcctcaggtttctgttgttatgttataaagaactcaagtagataac
ccttcataagagctaagaacacaatctaaaaatgagggtagagaactaaa
cacaacattcacatcaacgcatcttgaatggctgagaagcactgaagaag
tgtgcaaagtcccttttttttcaggtaatgaatatcaaaatgaccctgaa
ggtggtgtccagcgttatacttttc
gaattcagtgttcatcctgtgttaggtcatggcccaagaagcaaataatc
tgctgaattgaggattcaataatcatgtgcaaacaggctgtatcatggac
tacccaagccaattgcatgccacatcctagttccttaaaactgggtcccc
ttggtgctaattaaacttactatcctgggcagaggacagcagagcaagga
gacctaatggagctagctgaccttcaagagcttcctgggcaagcctgaag
gaatagattacttctatgacaattttccaatacactgtgccacaggcaag
ggtcctataggtatctgtaatgactttcctcttatttttaaggcagggat
tctcattccttggttcctgttgttatgtgaattcccagaggacacaacta
ttatttacaggtgaaaggctttatcacacctcctccccgaggagattcct
gtgtgacaaccaggaaacaccaggagcaaacttccctggtgatcactttg
gacctctatggactcacaccaacaggacctgcaaactgtgcatcacacaa
atcctcagaccccatcaaaggtcccagagcctcagtcctgaaaaaaaaca
cacacagctaagttcacacacatagacacaaattagaatgccaataaatc
caggggaggtgccatcgctcagaatatgatgaacaatatcagagtaaagg
tgtgatagcctgcaggcattgcattcacacactgagaggcagcaagtgtg
agcaggttccttccagctgttgacagcaacaatcagattgcaagcaaccc
aaggtcaagtacaaaagaagttgataataaacacacagcaccttgtttat
ccaacaattaaaacctgtcagtgcaacttaattgaatgatgggagatgac
acactccattcatggaaagaaattgggttaacagatggcacatacagcac
agggtactggcataattcctacctgtagttcaaattctcatacatgtaaa
cgttcaggattcacacatttctcatgtcattgctgatcttcctcaatatc
atttcaatctctgacttattaaatttgaatttctgattagtatgttgaaa
tttgggtgagtttctagcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_3661114_3662247
seq2: B6Ng01-089P24.g_69_1189 (reverse)

seq1  TCTGCTAGAAATACTTCAACCCAAAATTCCAACATCACTAATCAGATA-T  49
      |||||||||||    |||  || ||||| |||||| |||||||||| | |
seq2  TCTGCTAGAAA---CTCA--CCCAAATTTCAACAT-ACTAATCAGAAATT  44

seq1  CAAATATAAATAAAGTTAGAGAATTGAAATTGGATA-TGAGGAAGATCAG  98
      ||||| |||   |||| |||| ||||||||  |||| |||||||||||||
seq2  CAAATTTAA--TAAGTCAGAG-ATTGAAAT--GATATTGAGGAAGATCAG  89

seq1  CAATGACATGGAGGAAATGTGTGGAATCCTGAACGTTTACATGTATGAGA  148
      ||||||||||   ||||||||| |||||||||||||||||||||||||||
seq2  CAATGACATG--AGAAATGTGT-GAATCCTGAACGTTTACATGTATGAGA  136

seq1  ATTTGAACTACAGGTAGGAATTATGCCCAGTACCCTGTTGCCTGTATTGT  198
      ||||||||||||||||||||||||| ||||||||||||   ||||| |||
seq2  ATTTGAACTACAGGTAGGAATTATG-CCAGTACCCTGT--GCTGTA-TGT  182

seq1  GCCATCTGTTAACCCAATTTCCTTCCATGAATGGAGTGTGTCATCTCCCA  248
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCCATCTGTTAACCCAATTTCTTTCCATGAATGGAGTGTGTCATCTCCCA  232

seq1  TCATTCAATTAAGTTGCACTGACAGGTGTTTAATTGTTGGATAAACAAGG  298
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCATTCAATTAAGTTGCACTGACAGGT-TTTAATTGTTGGATAAACAAGG  281

seq1  TGCTGTGTGTTTATTATCAACTTCTTTTGTACTTGACCTTGGGTTGCTTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGTGTTTATTATCAACTTCTTTTGTACTTGACCTTGGGTTGCTTG  331

seq1  CAATCTGATTGTTGCTGTCAACAGCTGGAAGG-ACCTGCTCACACTTGCT  397
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAATCTGATTGTTGCTGTCAACAGCTGGAAGGAACCTGCTCACACTTGCT  381

seq1  GCCTCTCAGTGTGTGAATGCAATGCCTGCAGGCTATCACACCTTTACTCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCAGTGTGTGAATGCAATGCCTGCAGGCTATCACACCTTTACTCT  431

seq1  GATATTGTTCATCATATTCTGAGCGATGGCACCT-CCCTGGATTTATTGG  496
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GATATTGTTCATCATATTCTGAGCGATGGCACCTCCCCTGGATTTATTGG  481

seq1  CATTCTAA-TTGTGTCTATGTGTGTGAACTTAGCTGTGTGTG-TTTTGTT  544
      |||||||| ||||||||||||||||||||||||||||||||| |||| ||
seq2  CATTCTAATTTGTGTCTATGTGTGTGAACTTAGCTGTGTGTGTTTTTTTT  531

seq1  CAGGACTGAGGCTCTGGGACCTTTGATGGGGTCTGAGGATTTGTGTGATG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTGAGGCTCTGGGACCTTTGATGGGGTCTGAGGATTTGTGTGATG  581

seq1  CACAGTTTGCAGGTCCTGTTGGTGTGAGTCCATAGAGGTCCAAAGTGATC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTGCAGGTCCTGTTGGTGTGAGTCCATAGAGGTCCAAAGTGATC  631

seq1  ACCAGGGAAGTTTGCTCCTGGTGTTTCCTGGTTGTCACACAGGAATCTCC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGGAAGTTTGCTCCTGGTGTTTCCTGGTTGTCACACAGGAATCTCC  681

seq1  TCGGGGAGGAGGTGTGATAAAGCCTTTCACCTGTAAATAATAGTTGTGTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGAGGAGGTGTGATAAAGCCTTTCACCTGTAAATAATAGTTGTGTC  731

seq1  CTCTGGGAATTCACATAACAACAGGAACCAAGGAATGAGAATCCCTGCCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGAATTCACATAACAACAGGAACCAAGGAATGAGAATCCCTGCCT  781

seq1  TAAAAATAAGAGGAAAGTCATTACAGATACCTATAGGACCCTTGCCTGTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAAGAGGAAAGTCATTACAGATACCTATAGGACCCTTGCCTGTG  831

seq1  GCACAGTGTATTGGAAAATTGTCATAGAAGTAATCTATTCCTTCAGGCTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTGTATTGGAAAATTGTCATAGAAGTAATCTATTCCTTCAGGCTT  881

seq1  GCCCAGGAAGCTCTTGAAGGTCAGCTAGCTCCATTAGGTCTCCTTGCTCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGAAGCTCTTGAAGGTCAGCTAGCTCCATTAGGTCTCCTTGCTCT  931

seq1  GCTGTCCTCTGCCCAGGATAGTAAGTTTAATTAGCACCAAGGGGACCCAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTCTGCCCAGGATAGTAAGTTTAATTAGCACCAAGGGGACCCAG  981

seq1  TTTTAAGGAACTAGGATGTGGCATGCAATTGGCTTGGGTAGTCCATGATA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGGAACTAGGATGTGGCATGCAATTGGCTTGGGTAGTCCATGATA  1031

seq1  CAGCCTGTTTGCACATGATTATTGAATCCTCAATTCAGCAGATTATTTGC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGTTTGCACATGATTATTGAATCCTCAATTCAGCAGATTATTTGC  1081

seq1  TTCTTGGGCCATGACCTAACACAGGATGAACACTGAATTC  1134
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGGCCATGACCTAACACAGGATGAACACTGAATTC  1121