BAC Information

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BAC

Clone NameB6Ng01-090A02
Chromosome14 (Build37)
Map Location 8,440,415 - 8,440,843
singlet/doubletsinglet
Overlap geneLOC100041881
Upstream geneLOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304
Downstream geneLOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090A02.bB6Ng01-090A02.g
ACCDH902424DH902425
length1,211441
definitionDH902424|Mus musculus domesticus DNA, BAC clone: B6Ng01-090A02, 5' end.DH902425|Mus musculus domesticus DNA, BAC clone: B6Ng01-090A02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacataaaaccagagaccatgaaacttatagaggagaaagtggg
gaaaagcatagaagatatgggcacagggggaaagttcctgaatagaacag
caatggcttgtgctgtaagattgagaatagacaaatgggacctcatgaaa
ctgcaaagcttctgtaaagcaaaagacaccgtcaataagacaaaaaggcc
accaataggttgggaaaggttctttacctatcccaaatcggatagaggac
taataacgaatatgtataaagaacacaagaaggtggactttagaaaatcc
aataaccccattaaaaagtggggctcagagctaaacaaagaattgtcacc
tgaggaataccgaatggcagagaagcacttgaaaaatgttcagcatcctt
aatcatcagggaaatgcaaatcaaaacaaccctgagattctacttcacac
cagtcagaatggctaagatcaaaaattctggtgacagcagatgctggcaa
ggatgtggagaaagaggaacatttctccgttgttggtgggattgcaagct
tgtacaaccactctggaaatcagtctggcagttcttcagaaaattggaca
taggactactggaggatcccagaataccactcctgggcatatatcaagaa
gatgttccaactggtaagaaggacacatgctccactatgttcatagcagc
cttatttattatagccagaagctggaaagaacccagatgcccctcaacag
aggaatggatacagaaaatgtggtacatttacacaatggagtactactca
gctattaaaaagaatgaatttatgaaattcctagccaaatggttggacct
ggaggtagcatcatactgagtgaggtaacccaatcacaaaagaattcaca
tgatatgtactcactggtaagtggatatatcccagaaacttagaatacca
agatatgagaatacaattgcaaaacacaagaaactcaagaagactagacc
aaagtgtggacactttgccccttcttatatggaacaaaacacccagtaaa
gagtaagagacaacttggagttgatagaaagatgtatcatcttagactgc
atagaggatgctcacagttcagctatggaatgatccatgcctcattgagg
actaatagttcaaggactaagatcgcaccttaggtggaacaaaattgtac
taacacagtat
caggtgagtgacactgcaccttgtttctatgcaatactgggaactaaatc
cagagcttcatgcatgctagcaaagcagtctaccagtgagctgcctcccc
agcccaaactgttctgcactgttcactgcctgccaaacaggggaatgacc
ccggggatcttcaatgggaactaaagtcagtgggcttgttctaatgataa
tattcacattgcaagtatttcataactatgcagtcattcatggaaagata
tttgtgtgtgtgtgtgcacgcgcgtgcacgtcacaagcacatattcgatg
aggtcatggtcagctgtcttcttcttcttcttcttcctcttcctcctctt
cttcctcctcctcctcctcctccaccacctcctcctcttcctcttcttct
tcttcttcttcttcttcttcttcatcctcttcttcttcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8440415_8440843
seq2: B6Ng01-090A02.g_69_515 (reverse)

seq1  ---GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  47
         ||||||||||| || ||||||||||||||||||||||||||||||||
seq2  GAAGAAGAAGAAGAGGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  50

seq1  AGAA---------------GAGGAGGAGGAGGAGGAGGAGGAAGAGGAGG  82
       |||               |||||||||||||||||||| ||||||||||
seq2  GGAAGAGGAGGAGGTGGTGGAGGAGGAGGAGGAGGAGGAAGAAGAGGAGG  100

seq1  AAGAGGAAGAAGAAGAAGAAGAAGACAGCTGACCATGACCTCATCGAATA  132
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAAGAAGAAGAAGAAGAAGACAGCTGACCATGACCTCATCGAATA  150

seq1  TGTGCTTGTGACGTGCACGCGCGTGCACACACACACACAAATATCTTTCC  182
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTGTGACGTGCACGCGCGTGCACACACACACACAAATATCTTTCC  200

seq1  ATGAATGACTGCATAGTTATGAAATACTTGCAATGTGAATATTATCATTA  232
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGACTGCATAGTTATGAAATACTTGCAATGTGAATATTATCATTA  250

seq1  GAACAAGCCCACTGACTTTAGTTCCCATTGAAGATCCCCGGGGTCATTCC  282
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGCCCACTGACTTTAGTTCCCATTGAAGATCCCCGGGGTCATTCC  300

seq1  CCTGTTTGGCAGGCAGTGAACAGTGCAGAACAGTTTGGGCTGGGGAGGCA  332
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGGCAGGCAGTGAACAGTGCAGAACAGTTTGGGCTGGGGAGGCA  350

seq1  GCTCACTGGTAGACTGCTTTGCTAGCATGCATGAAGCTCTGGATTTAGTT  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTGGTAGACTGCTTTGCTAGCATGCATGAAGCTCTGGATTTAGTT  400

seq1  CCCAGTATTGCATAGAAACAAGGTGCAGTGTCACTCACCTGGAATTC  429
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTATTGCATAGAAACAAGGTGCAGTGTCACTCACCTGGAATTC  447