BAC Information

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BAC

Clone NameB6Ng01-091I08
Chromosome14 (Build37)
Map Location 23,726,532 - 23,855,752
singlet/doubletdoublet
Overlap gene1700112E06Rik
Upstream geneZfp503, EG665075, EG435392, LOC665068
Downstream geneKcnma1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091I08.bB6Ng01-091I08.g
ACCDH903523DH903524
length5571,142
definitionDH903523|Mus musculus domesticus DNA, BAC clone: B6Ng01-091I08, 5' end.DH903524|Mus musculus domesticus DNA, BAC clone: B6Ng01-091I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,726,532 - 23,727,066)(23,854,596 - 23,855,752)
sequence
gaattctattctgctgttgccagtatgttctcagctgtgccaaaactgag
caggtctgtggttcctttgtaacatcaaaacggaggcatttatcatagag
atttatcgtgggacagcctgccagatggtttgggtattttaaaggtgaac
tgctcaggccttgattagctcacgcagacttctagttaagacaactctat
cagcagcccagtagagagatgccttcctccacctcccctacccaccctcc
ccctgttctcaaaaggcagaaaatattaatgtaatggcagatgtggcata
gattgtcatttcagaaagagaaccaagccataaccaatcccactgattgc
attctaattataacatgaccccctgttgctttgcatagaggcagcattca
ttttggggatcccactgtaaaacttgcagagtcaacgaccctcaaagggg
caattgtaagatttaagcttaggttttcttttttcttttctcttctctac
ttttctccctccctccctccctccctccctccctctctcgctcgctcctt
ccccctc
gaattctatagtgttgggaggcagagggatgccctccaagacttctatag
tgttgtctctgaagcttgaaaaatgtcacctgacaagggaaaggaggcaa
tggaggtagatgttgggtacaagttttcagctctccgatcagtctctgtt
taatcatatggatcattaaaagaggaaaacatttaaggttgtggctacaa
tgagagacatgtttagagagatacaaagtccctggctttgaaaatggaga
aagaaatcaaggggcacagaatatgtatagcttctagaggctagggaaag
ctaccttctagaaactgggaaagaaaggcaagaacacagattttctgttg
gtctctcaggaacttgtagctgacctttgaccaggacagtgtgataatat
atttgtatggcttgaagtcacttaggtatggagctaccctagaaaactgg
aaagagaggaggaaagagggtgtgggtgggtatctgtaaaaaaaaaaatt
attatttggaaagagctacaggcacatgtgtgcaggactcccaacatact
ataaataaccagagttgctggcttgaaggaacaaccaattcaagtgatgg
tacagaaaaccaagcaaaccagggacatcctgtctgggcagagatcatga
aaaaggtgaagctgtacttccgggaggtcagcattctccaaggcaggaag
ttaggtgattattgtcaatgggtaaaacttcaccaggaaatgggattgtc
acacaagcaggttgtcactgagttagttactaatgaaaatgggggacata
tactttttgagtcgggtccatatgttggtcatgctaaaccaagcattcca
cgctagcaaagtacgatgaatggcatgagcctgtgaacatgatactataa
aatacacccagcttcacctgggtttagcttagctcttaagcctgagtcaa
acccaaggaaacatgagagacatgttcagtgtgtttcgtcgcacaaccaa
ctcatctgaacatttagaaaaaggaaactctaaaagccagagcatagatg
gcctcagtcatgtaggcacttgccatgcagcagcagacctggtttatgtg
ccacgaaaccatctaaaggtcagctttgtgccatgctgggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23726532_23727066
seq2: B6Ng01-091I08.b_40_574

seq1  GAATTCTATTCTGCTGTTGCCAGTATGTTCTCAGCTGTGCCAAAACTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTCTGCTGTTGCCAGTATGTTCTCAGCTGTGCCAAAACTGAG  50

seq1  CAGGTCTGTGGTTCCTTTGTAACATCAAAACGGAGGCATTTATCATAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTGTGGTTCCTTTGTAACATCAAAACGGAGGCATTTATCATAGAG  100

seq1  ATTTATCGTGGGACAGCCTGCCAGATGGTTTGGGTATTTTAAAGGTGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCGTGGGACAGCCTGCCAGATGGTTTGGGTATTTTAAAGGTGAAC  150

seq1  TGCTCAGGCCTTGATTAGCTCACGCAGACTTCTAGTTAAGACAACTCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGGCCTTGATTAGCTCACGCAGACTTCTAGTTAAGACAACTCTAT  200

seq1  CAGCAGCCCAGTAGAGAGATGCCTTCCTCCACCTCCCCTACCCACCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCCCAGTAGAGAGATGCCTTCCTCCACCTCCCCTACCCACCCTCC  250

seq1  CCCTGTTCTCAAAAGGCAGAAAATATTAATGTAATGGCAGATGTGGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTCTCAAAAGGCAGAAAATATTAATGTAATGGCAGATGTGGCATA  300

seq1  GATTGTCATTTCAGAAAGAGAACCAAGCCATAACCAATCCCACTGATTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTCATTTCAGAAAGAGAACCAAGCCATAACCAATCCCACTGATTGC  350

seq1  ATTCTAATTATAACATGACCCCCTGTTGCTTTGCATAGAGGCAGCATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAATTATAACATGACCCCCTGTTGCTTTGCATAGAGGCAGCATTCA  400

seq1  TTTTGGGGATCCCACTGTAAAACTTGCAGAGTCAACGACCCTCAAAGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGGATCCCACTGTAAAACTTGCAGAGTCAACGACCCTCAAAGGGG  450

seq1  CAATTGTAAGATTTAAGCTTAGGTTTTCTTTTTTCTTTTCTCTTCTCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTAAGATTTAAGCTTAGGTTTTCTTTTTTCTTTTCTCTTCTCTAC  500

seq1  TTTTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC  535
      |||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC  535

seq1: chr14_23854596_23855752
seq2: B6Ng01-091I08.g_66_1207 (reverse)

seq1  ATCCAAGCATGTGCCACAAAGCCTGACTTTTTAGATGGTTCTGT-GCACA  49
      |||| ||||  || ||||||| |||||  |||||||||||  || |||||
seq2  ATCCCAGCA--TGGCACAAAG-CTGAC-CTTTAGATGGTTTCGTGGCACA  46

seq1  TAAACTCAGGTCCTGCTGCTTGCATGGCAAGTGCCTACATGACTGA-GCC  98
      ||||| ||||| ||||||| |||||||||||||||||||||||||| |||
seq2  TAAAC-CAGGT-CTGCTGC-TGCATGGCAAGTGCCTACATGACTGAGGCC  93

seq1  ATCTTATTGCTCTGGCTTTTTAGAGTTTCCTTTTTCTAAATGTTCAGATG  148
      ||||   ||||||||| |||||||||||||||||||||||||||||||||
seq2  ATCT--ATGCTCTGGC-TTTTAGAGTTTCCTTTTTCTAAATGTTCAGATG  140

seq1  AGTTTGGTTGTGCGACGAAACACACTGAACATTGTCTTCTCATTGTTTCC  198
      || |||||||||||||||||||||||||||| |||| ||||| |||||||
seq2  AG-TTGGTTGTGCGACGAAACACACTGAACA-TGTC-TCTCA-TGTTTCC  186

seq1  TTGGGTTTTGACTCAGGCTTAAGAGCTAAGCTAAACCCAGGTGAAGCTGG  248
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGG-TTTGACTCAGGCTTAAGAGCTAAGCTAAACCCAGGTGAAGCTGG  235

seq1  GTGTATTTTATAGTATCATGTTCACAGGCTCATGCCATTCAATCGTACTT  298
      |||||||||||||||||||||||||||||||||||||||| ||||||| |
seq2  GTGTATTTTATAGTATCATGTTCACAGGCTCATGCCATTC-ATCGTAC-T  283

seq1  TTGCTAGCGTGGAATGCTTGGTTTAGCATGACCAACATATGGACCCGACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGCGTGGAATGCTTGGTTTAGCATGACCAACATATGGACCCGACT  333

seq1  CAAAAAGTATATGTCCCCCATTTTCATTAGTAACTAACTCAGTGACAACC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGTATATGTCCCCCATTTTCATTAGTAACTAACTCAGTGACAACC  383

seq1  TGCTTGTGTGACAATCCCATTTCCTGGTGAAGTTTTACCCATTGACAATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTGTGACAATCCCATTTCCTGGTGAAGTTTTACCCATTGACAATA  433

seq1  ATCACCTAACTTCCTGCCTTGGAGAATGCTGACCTCCCGGAAGTACAGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTAACTTCCTGCCTTGGAGAATGCTGACCTCCCGGAAGTACAGCT  483

seq1  TCACCTTTTTCATGATCTCTGCCCAGACAGGATGTCCCTGGTTTGCTTGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTTTTCATGATCTCTGCCCAGACAGGATGTCCCTGGTTTGCTTGG  533

seq1  TTTTCTGTACCATCACTTGAATTGGTTGTTCCTTCAAGCCAGCAACTCTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTACCATCACTTGAATTGGTTGTTCCTTCAAGCCAGCAACTCTG  583

seq1  GTTATTTATAGTATGTTGGGAGTCCTGCACACATGTGCCTGTAGCTCTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTATAGTATGTTGGGAGTCCTGCACACATGTGCCTGTAGCTCTTT  633

seq1  CCAAATAATAATTTTTTTTTTTACAGATACCCACCCACACCCTCTTTCCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAATAATTTTTTTTTTTACAGATACCCACCCACACCCTCTTTCCT  683

seq1  CCTCTCTTTCCAGTTTTCTAGGGTAGCTCCATACCTAAGTGACTTCAAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTTCCAGTTTTCTAGGGTAGCTCCATACCTAAGTGACTTCAAGC  733

seq1  CATACAAATATATTATCACACTGTCCTGGTCAAAGGTCAGCTACAAGTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAAATATATTATCACACTGTCCTGGTCAAAGGTCAGCTACAAGTTC  783

seq1  CTGAGAGACCAACAGAAAATCTGTGTTCTTGCCTTTCTTTCCCAGTTTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGACCAACAGAAAATCTGTGTTCTTGCCTTTCTTTCCCAGTTTCT  833

seq1  AGAAGGTAGCTTTCCCTAGCCTCTAGAAGCTATACATATTCTGTGCCCCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTAGCTTTCCCTAGCCTCTAGAAGCTATACATATTCTGTGCCCCT  883

seq1  TGATTTCTTTCTCCATTTTCAAAGCCAGGGACTTTGTATCTCTCTAAACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCTTTCTCCATTTTCAAAGCCAGGGACTTTGTATCTCTCTAAACA  933

seq1  TGTCTCTCATTGTAGCCACAACCTTAAATGTTTTCCTCTTTTAATGATCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCATTGTAGCCACAACCTTAAATGTTTTCCTCTTTTAATGATCC  983

seq1  ATATGATTAAACAGAGACTGATCGGAGAGCTGAAAACTTGTACCCAACAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATTAAACAGAGACTGATCGGAGAGCTGAAAACTTGTACCCAACAT  1033

seq1  CTACCTCCATTGCCTCCTTTCCCTTGTCAGGTGACATTTTTCAAGCTTCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCCATTGCCTCCTTTCCCTTGTCAGGTGACATTTTTCAAGCTTCA  1083

seq1  GAGACAACACTATAGAAGTCTTGGAGGGCATCCCTCTGCCTCCCAACACT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAACACTATAGAAGTCTTGGAGGGCATCCCTCTGCCTCCCAACACT  1133

seq1  ATAGAATTC  1157
      |||||||||
seq2  ATAGAATTC  1142