BAC Information

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BAC

Clone NameB6Ng01-091M13
Chromosome14 (Build37)
Map Location 56,206,979 - 56,207,505
singlet/doubletsinglet
Overlap genePsme2
Upstream gene4931414P19Rik, Psmb5, 5830406J20Rik, Cdh24, Acin1, LOC667711, 1700123O20Rik, LOC100042676, Cebpe, Slc7a8, LOC667893, Homez, Ppp1r3e, Bcl2l2, Pabpn1, Slc22a17, Efs, Il25, Cmtm5, Myh6, Myh7, Ngdn, Zfhx2, Thtpa, Ap1g2, Jph4, LOC667938, Dhrs2, LOC100042720, LOC628176, LOC100042729, EG667952, Dhrs4, BC036313, Cpne6, Nrl, Pck2, Wdr23, 1110028A07Rik, Psme1, 1500005A01Rik
Downstream geneRnf31, Isgf3g, Rec8L1, Ipo4, Tm9sf1, Tssk4, 1810034K20Rik, Nedd8, Gmpr2, Tinf2, Tgm1, Rabggta, Dhrs1, 2610027L16Rik, Cideb, Ltb4r2, Ltb4r1, Adcy4, Ripk3, Nfatc4, BC030046, Cbln3, 9130227C08Rik, 2310014G06Rik, Cma1, Cma2, LOC100042759, EG545056, Mcpt1, Mcpt9, Mcpt2, Mcpt4, Mcpt8, Ctsg, Gzme, Gzmd, Gzmg, LOC672095, Gzmn, LOC100042770, LOC668072, LOC668074, Gzmf, Gzmc, LOC219102, Gzmb, LOC668082, Atp12a, Rnf17, Cenpj, Parp4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091M13.bB6Ng01-091M13.g
ACCDH903718DH903719
length9151,180
definitionDH903718|Mus musculus domesticus DNA, BAC clone: B6Ng01-091M13, 5' end.DH903719|Mus musculus domesticus DNA, BAC clone: B6Ng01-091M13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtagaccaggctggcctcgaactcagaaatctgcctgcc
tctgcctcccgagtgctgggattaaagccgtgctccaccacgcccggcac
ttttttttaaaggtttatttatttattatatgtaagtacactgtagctat
cttcagacaagagggcatcagatcccattacagatggttgtgagccacca
tgtggttgctgggatttgaactcaagaccttcggaagagcagtcagtgct
tttaactgctgagccatctctccagccccgaagactcacttttgattccc
agcacccacatagacgctcacagctttctgtgacctcagtccccagggaa
tccaacacccttttctggcccatgtgggcaccaggcatgcacatgggaca
taggcatgcatatagctaaatacccataaaggggaattataaaaaacata
cacgtataaaaaaataataacaagaaattttaagaaaagaagtagtatat
taggcctcagtgattttgttgagtgagtcctccttttaacataggtaatc
acatggatccagcacctgatccccaagattgaggatggaaatgattttgg
ggtggcaattcaggtaagaattggtgactgaagacagagtgggaggagac
tcaagagggagggatggaaacaaggccatcacccggaggtcagaggaaga
agaaacaggaaagggggggggatgaactgttgtctttgcttctcacgtct
ctgcaggagaaggtgctggagagagttgaatgctgtcaagaccaaagtag
aagcttttcagacaaccatttccaagtgagagcagctgcaggaacccagg
gaccctacagggattctttgaagctaggcggttctttagagtgatgggag
acggcggggtgggtg
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcatcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
ttcacctcacaccagttagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttgatg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatcctgaagatgttccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtcgctcaacagaggaatggatacagaaaaatgtggtacagggaatggat
acagaaaaatgtggtacatttacacaatggagtactactcagctattaaa
aagaatgaatttatgaaaatcctaggcaaatggatggacctggagggcat
catcctgagtgaggtaacccaatcacaaaagaactcgaacaatatgttct
cactgataagtggatattagcccagaaatttagaatacccaagatataag
atataatttgctgaacacatgaaactcaagaagaatgaagaccaaagtgt
ggacactttgccccttcttagaactgggaacaaaacacccatggaaggag
ttacagagacaaagtttggagctgagacgaaaggatagaccatctagaga
ctgccatatccaaggatccatcccataatcagcttccaaacgctgacacc
attgcatacattagcaagattttgctgaaaggacccagatatagtttgtc
tcttgtgagactatgcccgggccctggcaaacacagaagtggatgctcac
agttcagctattggatggatcacaggcctcaatggagatctagagaaagt
atcgaagagctgaggattctgcatcctatagatggacacatatggactac
cagtacagctgctatggatcagagatgcctgtcgctatcatggaaagagt
ccattgtcgtgcaactttaatgcctcagttccggggaacacaagtcaaga
aatggagatgtgggttggttaggggagagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_56206979_56207505
seq2: B6Ng01-091M13.b_433_959 (reverse)

seq1  CACCCACCCCGCCCGTCTCCCATCACTCTGAAAGAACCGCCTAGCTTC-A  49
      ||||||||||| ||||||||||||||||| |||||||||||||||||| |
seq2  CACCCACCCCG-CCGTCTCCCATCACTCT-AAAGAACCGCCTAGCTTCAA  48

seq1  AGAATCCCTGTAGGGTCCCTGGGTTCCTGCAGCTGCTCTCACTTGGAAAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCCCTGTAGGGTCCCTGGGTTCCTGCAGCTGCTCTCACTTGGAAAT  98

seq1  GGTTGTCTGGAAAGCTTCTACTTTGGTCTTGACAGCATTC-ACTCTCTCC  148
      ||||||||| |||||||||||||||||||||||||||||| |||||||||
seq2  GGTTGTCTGAAAAGCTTCTACTTTGGTCTTGACAGCATTCAACTCTCTCC  148

seq1  AGCACCTTCTCCTGCAGAGACGTGAGAAGCAAAGACAACAGTTCATCCCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTTCTCCTGCAGAGACGTGAGAAGCAAAGACAACAGTTCATCCCC  198

seq1  CCCCCTTTCCTGTTTCTTCTTCCTCTGACCTCCGGGTGATGGCCTTGTTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTTCCTGTTTCTTCTTCCTCTGACCTCCGGGTGATGGCCTTGTTT  248

seq1  CCATCCCTCCCTCTTGAGTCTCCTCCCACTCTGTCTTCAGTCACCAATTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCTCCCTCTTGAGTCTCCTCCCACTCTGTCTTCAGTCACCAATTC  298

seq1  TTACCTGAATTGCCACCCCAAAATCATTTCCATCCTCAATCTTGGGGATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGAATTGCCACCCCAAAATCATTTCCATCCTCAATCTTGGGGATC  348

seq1  AGGTGCTGGATCCATGTGATTACCTATGTTAAAAGGAGGACTCACTCAAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCTGGATCCATGTGATTACCTATGTTAAAAGGAGGACTCACTCAAC  398

seq1  AAAATCACTGAGGCCTAATATACTACTTCTTTTCTTAAAATTTCTTGTTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCACTGAGGCCTAATATACTACTTCTTTTCTTAAAATTTCTTGTTA  448

seq1  TTATTTTTTTATACGTGTATGTTTTTTATAATTCCCCTTTATGGGTATTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTTATACGTGTATGTTTTTTATAATTCCCCTTTATGGGTATTT  498

seq1  AGCTATATGCATGCCTATGTCCCATGTGC  527
      |||||||||||||||||||||||||||||
seq2  AGCTATATGCATGCCTATGTCCCATGTGC  527