BAC Information

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BAC

Clone NameB6Ng01-091M23
Chromosome13 (Build37)14 (Build37)
Map Location 68,312,831 - 68,313,38143,009,272 - 43,010,275
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneZfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222
Downstream geneAA414992, LOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2, LOC666205
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091M23.bB6Ng01-091M23.g
ACCDH903738DH903739
length1,094996
definitionDH903738|Mus musculus domesticus DNA, BAC clone: B6Ng01-091M23, 5' end.DH903739|Mus musculus domesticus DNA, BAC clone: B6Ng01-091M23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(68,312,831 - 68,313,381)(43,009,272 - 43,010,275)
sequence
gaattcttgggcaccgctgggttctgcagactttggatacctgggtttgc
aacactggctgcccccctgtaccccctgaccaaggaaagtggagaattta
gatggacatcagaacatcagaaagcctttgaaaatattaagaaggccctg
ctgactgcgccagctttggcactgccagatctaaccaagcccttcatcct
ctatgttgatgagagggcgggggtggccagaggagttcttactcaggctc
tagggccgtggaagaggccggtggcatatttgtctaaaaagctggaccca
gtggccagcggatggcccacatgtttaaaggccgttgctgcagtagccct
actcgttaaggatgctgacaaattaactctgggacagcaaataactgtgg
tagccccccactctcttgaaagcattatccgtcagcccccagaccgatgg
atgacaaatgcccggatgactcactatcagagtctgctgctgactgaatg
ggtcgtgtttgctccccccgctattctcaaccctgccaccttcctccctg
aaacggatgattcctcacccgttcactgctgtgcagacatccttgcggag
gaaattgggatccgaagtgatctacgtgaccagccgtggccaggtgttcc
aaattggtacatagatggaagcagtttcctagtagaaggtaagaggatgg
caggggcagcggtggtagatggtaagcaagtcgtgtgggctggcagcctg
ccagaaggtacgtcagctcaaaaagctgaattaattgccctgacccaggc
ccttcggatggttgaggggcagtccatcaacatttacaccgatagcaggt
atgcttttgctacagcccacgtccacagtgccatctatagacaaagaggg
ttgctgacatcagcaggcaaggacataaaaaacaagaggagattttgagc
ctccttgaggctattcatctgcctgccaaagtggccattatacattgtcc
tggacatcaaaaaggaccacgtgctggtgaaagggaaataaaaatggctg
atgttaaagctaacagctgcactcggccctaagaattctgccct
gaattccagaaaggaaggaagagcaatggcatcagtctttaatgattggg
gaaagtgtatgagactcaatgatgagcaacccaaaacaagataacccaaa
cttggccctaatagggtattttttttaaacctcctttatatgcgtttgtg
tattataaagcttcttcaattgtaggtttccacatggcatttcaaatgtc
ttcagtcatttatcccacctctatactacttccttgacttagtgtggctt
tgctttctgtcctgtaccacaggtgtggaaaacccactgggcagatcaaa
tgcagacatggtagattgtatttatcctaagcccactttctgatattgac
ctggatggaaatgaaatcacactacttaggggtggaagaatgtggacttg
gacatgaggggatggaagatggggttccctgacaccttagagtccatttg
acaatggaaaccacaggcaatagtggagaatggaggttctgaattctatg
tgcctatgttaagtagtctggggacagggacccatgaaatcctggacata
cagacagttctgggttacagggagttcacagcagttttgagcctgctggc
ctgcaaggagaccagggcaaggggttctcagaatcttagacatgcaggca
cttctagaaatcttagaggagctgaacatggaggaggccagcaggctaag
aactagccctgaaatcagggaatggggaattctggattagctcagaggtg
actagcccaggagtaatgaggagccttctgttggagacttagatagcaag
gctctgtaggcaaaggctttttctccatgtaacctacagttggtttgatg
agagagacagtccttgggttctaaactgtttattgattgtttttcatgga
aatgaaagcataacatgtcttgaggttagactagagtaagtaccttctga
gagaatgtccaggaagggatgtatgactgaacctacattcttctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_68312831_68313381
seq2: B6Ng01-091M23.b_792_1142

seq1  CAGCCTGCCAGAAGTTATGTCAGCACAAAAATAGCTGAATTAATTGCCCT  50
      |||||||||||||| || |||||| |||||  ||||||||||||||||||
seq2  CAGCCTGCCAGAAGGTACGTCAGCTCAAAA--AGCTGAATTAATTGCCCT  48

seq1  GACCCAGGCCCTTCGGATGGCTGA-GGGCAATCCATCAACATTTACAGCG  99
      |||||||||||||||||||| ||| ||||| |||||||||||||||| ||
seq2  GACCCAGGCCCTTCGGATGGTTGAGGGGCAGTCCATCAACATTTACACCG  98

seq1  ATAGCTGAAATGCTTTTGCTACAGCCCACGTCCTCAGTGCCATCTATAGA  149
      ||||| |  |||||||||||||||||||||||| ||||||||||||||||
seq2  ATAGCAGGTATGCTTTTGCTACAGCCCACGTCCACAGTGCCATCTATAGA  148

seq1  GAAAGACGGTTGCTGACATCACCAGGCAAGGACATAAAAAATAAAGAGGA  199
       ||||| |||||||||||||| |||||||||||||||||||  |||||||
seq2  CAAAGAGGGTTGCTGACATCAGCAGGCAAGGACATAAAAAA-CAAGAGGA  197

seq1  GATTCTGAGCCTCCTTGAGGCTATTCACCTGCCTGCCAAAGTTGTCATTA  249
      |||| |||||||||||||||||||||| |||||||||||||| | |||||
seq2  GATTTTGAGCCTCCTTGAGGCTATTCATCTGCCTGCCAAAGTGGCCATTA  247

seq1  TACATTGTCCTGGACATCAAAAAGGA-CATGATGTTGTGACAAGAAGGAA  298
      |||||||||||||||||||||||||| || |   | |||| | |  | ||
seq2  TACATTGTCCTGGACATCAAAAAGGACCACGTGCTGGTGAAAGG--GAAA  295

seq1  TAACATGAGCCGGGCGTGGTGGCGCACGCCTTTAATCCCAGCACTCGGGA  348
      ||| |   || |    || |   ||       |||   | ||||||    
seq2  TAAAAATGGCTG---ATGTTAAAGC-------TAACAGCTGCACTC----  331

seq1  GGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGT  398
            |||     || |||||   |                        
seq2  ------GGCCCTAAGAATTCTGCCCT------------------------  351

seq1  GAGTGCCAGGACAGCCAGGACTATATACAGAGAAACCCTGTCTCAAAAAA  448
                                                        
seq2  --------------------------------------------------  351

seq1  ACAAAACAATACAAAAAAACAAAACAAAAAAAAAACAACAAAAGGAATAA  498
                                                        
seq2  --------------------------------------------------  351

seq1  CATGGCTGATGTTAAAGCTAAACAGGCTGCACTCAGCCCTAAGATACTGC  548
                                                        
seq2  --------------------------------------------------  351

seq1  CCT  551
         
seq2  ---  351

seq1: chr14_43009272_43010275
seq2: B6Ng01-091M23.g_65_1060

seq1  GAATTCCAGAAAGGAAGGAAGAGCAATGGCATCAGTCTTTAATGATTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAAGGAAGGAAGAGCAATGGCATCAGTCTTTAATGATTGGG  50

seq1  GAAAGTGTATGAGACTCAATGATGAGCAACCCAAAACAAGATAACCCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGTATGAGACTCAATGATGAGCAACCCAAAACAAGATAACCCAAA  100

seq1  CTTGGCCCTAATAGGGTATTTTTTTTAAACCTCCTTTATATGCGTTTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCCTAATAGGGTATTTTTTTTAAACCTCCTTTATATGCGTTTGTG  150

seq1  TATTATAAAGCTTCTTCAATTGTAGGTTTCCACATGGCATTTCAAATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAAAGCTTCTTCAATTGTAGGTTTCCACATGGCATTTCAAATGTC  200

seq1  TTCAGTCATTTATCCCACCTCTATACTACTTCCTTGACTTAGTGTGGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCATTTATCCCACCTCTATACTACTTCCTTGACTTAGTGTGGCTT  250

seq1  TGCTTTCTGTCCTGTACCACAGGTGTGGAAAACCCACTGGGCAGATCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCTGTCCTGTACCACAGGTGTGGAAAACCCACTGGGCAGATCAAA  300

seq1  TGCAGACATGGTAGATTGTATTTATCCTAAGCCCACTTTCTGATATTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACATGGTAGATTGTATTTATCCTAAGCCCACTTTCTGATATTGAC  350

seq1  CTGGATGGAAATGAAATCACACTACTTAGGGGTGGAAGAATGTGGACTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGGAAATGAAATCACACTACTTAGGGGTGGAAGAATGTGGACTTG  400

seq1  GACATGAGGGGATGGAAGATGGGGTTCCCTGACACCTTAGAGTCCATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGAGGGGATGGAAGATGGGGTTCCCTGACACCTTAGAGTCCATTTG  450

seq1  ACAATGGAAACCACAGGCAATAGTGGAGAATGGAGGTTCTGAATTCTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGAAACCACAGGCAATAGTGGAGAATGGAGGTTCTGAATTCTATG  500

seq1  TGCCTATGTTAAGTAGTCTGGGGACAGGGACCCATGAAATCCTGGACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATGTTAAGTAGTCTGGGGACAGGGACCCATGAAATCCTGGACATA  550

seq1  CAGACAGTTCTGGGTTACAGGGAGTTCACAGCAGTTTTGAGCCTGCTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGTTCTGGGTTACAGGGAGTTCACAGCAGTTTTGAGCCTGCTGGC  600

seq1  CTGCAAGGAGACCAGGGCAAGGGGTTCTCAGAATCTTAGACATGCAGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGGAGACCAGGGCAAGGGGTTCTCAGAATCTTAGACATGCAGGCA  650

seq1  CTTCTAGAAATCTTAGAGGAGCTGAACATGGAGGAGGCCAGCAGGCTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGAAATCTTAGAGGAGCTGAACATGGAGGAGGCCAGCAGGCTAAG  700

seq1  AACTAGCCCTGAAATCAGGGAATGGGGAATTCTGGATTAGCTCAGAGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGCCCTGAAATCAGGGAATGGGGAATTCTGGATTAGCTCAGAGGTG  750

seq1  ACTAGCCCAGGAGTAATGAGGAGCCTTCTGTTGGAGACTTAGATAGCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCCCAGGAGTAATGAGGAGCCTTCTGTTGGAGACTTAGATAGCAAG  800

seq1  GCTCTGTAGGCAAAGGCTTTTTCTCCATGTAACCTACAGTTGGTTTGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTAGGCAAAGGCTTTTTCTCCATGTAACCTACAGTTGGTTTGATG  850

seq1  AGAGAGACAGTCCTT-GGTTCTAAACTGTTTATTGATTGTTTTTCATGGA  899
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGAGAGACAGTCCTTGGGTTCTAAACTGTTTATTGATTGTTTTTCATGGA  900

seq1  AATGAAAGCATAACATGTCTTGAGGTTAGACTAGAAGTTAAGTACCTTCT  949
      |||||||||||||||||||||||||||||||||||   ||||||||||||
seq2  AATGAAAGCATAACATGTCTTGAGGTTAGACTAGA--GTAAGTACCTTCT  948

seq1  GAGGAAGGAATGTCCAGGAAGGGAAGGTTATTGACTGAACCCTACCATCT  999
      |||    ||||||||||||||||| |  || |||||||| |||||  |||
seq2  GAG---AGAATGTCCAGGAAGGGATG--TA-TGACTGAA-CCTACATTCT  991

seq1  TCTAT  1004
      |||||
seq2  TCTAT  996