BAC Information

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BAC

Clone NameB6Ng01-092F10
Chromosome14 (Build37)
Map Location 43,818,770 - 43,929,568
singlet/doubletdoublet
Overlap geneLOC100041106, EG638262, EG640992, EG666471
Upstream geneLOC666233, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454
Downstream geneLOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik, LOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092F10.bB6Ng01-092F10.g
ACCDH904126DH904127
length9541,132
definitionDH904126|Mus musculus domesticus DNA, BAC clone: B6Ng01-092F10, 5' end.DH904127|Mus musculus domesticus DNA, BAC clone: B6Ng01-092F10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,818,770 - 43,819,725)(43,928,410 - 43,929,568)
sequence
gaattccaaaacattgaatcattcttacatcctatacatgatgcatattg
ggtcatggtgagtgatcatttgcatgtgttattagaaaccgtttccaaga
cgttattgagtattttttgcatcaatatttgttatggtttttatatgctc
aacccactgagtggcaacataagaaggagtggccaagtttgagtatatgg
ggcactgtgtgtgtggtcaaaaccctcaccctagctgcctggacattaat
gttctattagcagccttcacatgaacatgtaggactctcagcttctcctt
accatgcctttctggatgcgtccatgtggccaccttgttggtacttgact
gatcctcttaacctgtaaggcgtccacattgaattctaggagaagctgca
gtgcagccagatttggaggagtcccaaaaccctcctgagacaactagtca
tggagtttgttcagcagccatccatctgcagcacttagggtgttcttcag
agtcacatctcttctctaaagctttgaagaaccacctgtctgagggccag
aagctcttgtgggtatctgctgatgcagagttagaaacagctctactaag
tactcagcctgatgcatggagtcctaaggggagacacagcaaatacagag
gtctgaaggaaaggacaaagtacccaaaatctgagtatccaaggctgtat
cctcagattagaaagagaacagaaaaaatggagagagaacccagtaagtg
acaatggggagaagggaggccaggtgttcctggtggtcatgaactctgca
cagagttcacagtaaatttcaatgtggattatgaaagtagaaaatgttca
ctttcgtttactacattcaccttgtttgggcagataatccatgcagaagc
tgagaaagggttaagaaagaaagttgatctcagagaaacaggaggactgg
gggt
gaattctccaggtgcctcagcaccgccacctcgtggatggtggagagcag
catgccctcctcactggtctgcactcccaagtgcttcagagtcaggaagg
ggctgccattcttcaggttgcaggccttgaacaccttcctgtaggcaggc
gccttctccagtctctgccatgcactcatactgctgatcagtgtgactca
ggctgtccttctccatgctggctgcaagctgctggtgtagcacagtggaa
tctgggtgagcacttgctgccttacacgcctcagggactcctggagttgt
actggccaccaggctagatggacagccttccttgccctctggagcaaacc
aggctcagctgcagtgaaactccacctagccaagttgctgcaccttgctg
gtgctgcaagagagcaccaatccctcctcttccccctcctcagcaattac
aaagtctgccccaatctctgcacttaggaggaggagacaggaggacaagg
agaaagtgtgatcagactgcccaggagacttccactgggttccaccagat
cccctcctcctcctctctactcgccttggcttcctaatctggccaggttt
cttggagaaaaatcaagttacttttccccccagcagggctcatgcagtct
tagggaggaaaaggtcgctggggcccctcagggatgagtgcagcacagga
agagagggtgcttgcccagcagcccagagtgtgccctgagcacaggggag
gggaggcgcctggtagtcaatgtcatggctcaatatttatacctatatca
ttgttctccgctgccctccctcactccgggcctcaagctggcatagaccc
tggtgtcctgatgtcccgctgtggaggtcctctagctcccccagctggcc
ccataacctacccagtcttcactttagcccagattaaacccacacagccc
ctacaccccattactttcacccaccccgatcctcccgggacctcgccact
cagccacccacccgaattctgcgtcagaggtctgcttgccctgcactgtt
tgccccttggaacagtactactactgctgcagcaccctgtgagcagggcg
gcactgctgcagggcatagggtggaagggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_43818770_43819725
seq2: B6Ng01-092F10.b_48_1001

seq1  GAATTCCAAAACATTGAATCATTCTTACATCCTATACATGATGCATATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAACATTGAATCATTCTTACATCCTATACATGATGCATATTG  50

seq1  GGTCATGGTGAGTGATCATTTGCATGTGTTATTAGAAACCGTTTCCAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGGTGAGTGATCATTTGCATGTGTTATTAGAAACCGTTTCCAAGA  100

seq1  CGTTATTGAGTATTTTTTGCATCAATATTTGTTATGGTTTTTATATGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTATTGAGTATTTTTTGCATCAATATTTGTTATGGTTTTTATATGCTC  150

seq1  AACCCACTGAGTGGCAACATAAGAAGGAGTGGCCAAGTTTGAGTATATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACTGAGTGGCAACATAAGAAGGAGTGGCCAAGTTTGAGTATATGG  200

seq1  GGCACTGTGTGTGTGGTCAAAACCCTCACCCTAGCTGCCTGGACATTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGTGTGTGTGGTCAAAACCCTCACCCTAGCTGCCTGGACATTAAT  250

seq1  GTTCTATTAGCAGCCTTCACATGAACATGTAGGACTCTCAGCTTCTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATTAGCAGCCTTCACATGAACATGTAGGACTCTCAGCTTCTCCTT  300

seq1  ACCATGCCTTTCTGGATGCGTCCATGTGGCCACCTTGTTGGTACTTGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGCCTTTCTGGATGCGTCCATGTGGCCACCTTGTTGGTACTTGACT  350

seq1  GATCCTCTTAACCTGTAAGGCGTCCACATTGAATTCTAGGAGAAGCTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTCTTAACCTGTAAGGCGTCCACATTGAATTCTAGGAGAAGCTGCA  400

seq1  GTGCAGCCAGATTTGGAGGAGTCCCAAAACCCTCCTGAGACAACTAGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGCCAGATTTGGAGGAGTCCCAAAACCCTCCTGAGACAACTAGTCA  450

seq1  TGGAGTTTGTTCAGCAGCCATCCATCTGCAGCACTTAGGGTGTTCTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTTGTTCAGCAGCCATCCATCTGCAGCACTTAGGGTGTTCTTCAG  500

seq1  AGTCACATCTCTTCTCTAAAGCTTTGAAGAACCACCTGTCTGAGGGCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACATCTCTTCTCTAAAGCTTTGAAGAACCACCTGTCTGAGGGCCAG  550

seq1  AAGCTCTTGTGGGTATCTGCTGATGCAGAGTTAGAAACAGCTCTACTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTTGTGGGTATCTGCTGATGCAGAGTTAGAAACAGCTCTACTAAG  600

seq1  TACTCAGCCTGATGCATGGAGTCCTAAGGGGAGACACAGCAAATACAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGCCTGATGCATGGAGTCCTAAGGGGAGACACAGCAAATACAGAG  650

seq1  GTCTGAAGGAAAGGACAAAGTACCCAAAATCTGAGTATCCAAGGCTGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAGGAAAGGACAAAGTACCCAAAATCTGAGTATCCAAGGCTGTAT  700

seq1  CCTCAGATTAGAAAGAGAACAGAAAAAATGGAGAGAGAACCCAGTAAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGATTAGAAAGAGAACAGAAAAAATGGAGAGAGAACCCAGTAAGTG  750

seq1  ACAATGGGGAGAAGGGAGGCCAGGTGTTCCTGGTGGTCATGAACTCTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGGGAGAAGGGAGGCCAGGTGTTCCTGGTGGTCATGAACTCTGCA  800

seq1  CAGAGTTCACAGTAAATTTCAATGTGGATTATGAAAGTAGAAAATGTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTCACAGTAAATTTCAATGTGGATTATGAAAGTAGAAAATGTTCA  850

seq1  CTTTCGTTTACTACATTCACCTTGTTTGGGCAGATAATCCATGCAGGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||  | 
seq2  CTTTCGTTTACTACATTCACCTTGTTTGGGCAGATAATCCATGCAG--AA  898

seq1  GCTGAGAAAGGGTTAAGAAAGAAAGTTGATCTCAGAGAAACAGGAGGACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAAAGGGTTAAGAAAGAAAGTTGATCTCAGAGAAACAGGAGGACT  948

seq1  GGGGGT  956
      ||||||
seq2  GGGGGT  954

seq1: chr14_43928410_43929568
seq2: B6Ng01-092F10.g_69_1200 (reverse)

seq1  CATCCC-TCCACCCTCTGCCCTCTGCAGCAGTGCCCGCCCCCTGCTCACA  49
      |||||| |||||||| ||||  ||||||||||||   | |||||||||||
seq2  CATCCCTTCCACCCTATGCC--CTGCAGCAGTGC---CGCCCTGCTCACA  45

seq1  GAGTGCTGCAGCAGTAGTTAGTTAACCTGCTCCAAGGGGCAAACACGTGC  99
      | ||||||||||||||| ||||    ||| ||||||||||||||| ||||
seq2  GGGTGCTGCAGCAGTAG-TAGT---ACTGTTCCAAGGGGCAAACA-GTGC  90

seq1  AGGGGCAGGCAGACACTCCTGGACCGCAGGAATCGCGTGGGTGGGCTGAG  149
      | ||||| |||||| || |||   ||||| | ||| |||||| |||||||
seq2  A-GGGCAAGCAGAC-CT-CTG--ACGCAGAATTCGGGTGGGT-GGCTGAG  134

seq1  TGGCGAGGGTCCCCGGGGAGGATCGGGGTGGGTGAGAGTAATGGGGTGTA  199
      |||||| ||||||  |||||||||||||||||||| ||||||||||||||
seq2  TGGCGA-GGTCCC--GGGAGGATCGGGGTGGGTGAAAGTAATGGGGTGTA  181

seq1  GGGGGCTGTGTGGGTTTAATCTTGGGCTAAAGTTGAGACTGGGTAGGTTA  249
       |||||||||||||||||||| |||||||||||  |||||||||||||||
seq2  -GGGGCTGTGTGGGTTTAATC-TGGGCTAAAGTGAAGACTGGGTAGGTTA  229

seq1  TGGGGGCCAGCTGGGGGGAGCTAGAGGAACCTCCCACAGCGGGGACATCA  299
      | |||||||||| |||||||||||||| |||| ||||||| |||||||||
seq2  T-GGGGCCAGCT-GGGGGAGCTAGAGG-ACCT-CCACAGC-GGGACATCA  274

seq1  GGACACCAGGGTCCTATGCCAGCTTGAGGCCCGGAGTGAGGGAGGGCAGC  349
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGACACCAGGGT-CTATGCCAGCTTGAGGCCCGGAGTGAGGGAGGGCAGC  323

seq1  GGAGAACAATGATATAGGTATAAATATTGAGCCATGACATTGACCTACCA  399
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGAGAACAATGATATAGGTATAAATATTGAGCCATGACATTGA-CTACCA  372

seq1  GGCGCCTCCCCTCCCCTGTGCTCAGGGCACACTCTGGGCTGCTGGGCAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCCTCCCCTCCCCTGTGCTCAGGGCACACTCTGGGCTGCTGGGCAAG  422

seq1  CACCCTCTCTTCCTGTGCTGCACTCATCCCTGAGGGGCCCCAGCGACCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCTCTTCCTGTGCTGCACTCATCCCTGAGGGGCCCCAGCGACCTT  472

seq1  TTCCTCCCTAAGACTGCATGAGCCCTGCTGGGGGGAAAAGTAACTTGATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCCTAAGACTGCATGAGCCCTGCTGGGGGGAAAAGTAACTTGATT  522

seq1  TTTCTCCAAGAAACCTGGCCAGATTAGGAAGCCAAGGCGAGTAGAGAGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCAAGAAACCTGGCCAGATTAGGAAGCCAAGGCGAGTAGAGAGGA  572

seq1  GGAGGAGGGGATCTGGTGGAACCCAGTGGAAGTCTCCTGGGCAGTCTGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGGGATCTGGTGGAACCCAGTGGAAGTCTCCTGGGCAGTCTGAT  622

seq1  CACACTTTCTCCTTGTCCTCCTGTCTCCTCCTCCTAAGTGCAGAGATTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTTCTCCTTGTCCTCCTGTCTCCTCCTCCTAAGTGCAGAGATTGG  672

seq1  GGCAGACTTTGTAATTGCTGAGGAGGGGGAAGAGGAGGGATTGGTGCTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACTTTGTAATTGCTGAGGAGGGGGAAGAGGAGGGATTGGTGCTCT  722

seq1  CTTGCAGCACCAGCAAGGTGCAGCAACTTGGCTAGGTGGAGTTTCACTGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGCACCAGCAAGGTGCAGCAACTTGGCTAGGTGGAGTTTCACTGC  772

seq1  AGCTGAGCCTGGTTTGCTCCAGAGGGCAAGGAAGGCTGTCCATCTAGCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGCCTGGTTTGCTCCAGAGGGCAAGGAAGGCTGTCCATCTAGCCT  822

seq1  GGTGGCCAGTACAACTCCAGGAGTCCCTGAGGCGTGTAAGGCAGCAAGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCCAGTACAACTCCAGGAGTCCCTGAGGCGTGTAAGGCAGCAAGTG  872

seq1  CTCACCCAGATTCCACTGTGCTACACCAGCAGCTTGCAGCCAGCATGGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCAGATTCCACTGTGCTACACCAGCAGCTTGCAGCCAGCATGGAG  922

seq1  AAGGACAGCCTGAGTCACACTGATCAGCAGTATGAGTGCATGGCAGAGAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAGCCTGAGTCACACTGATCAGCAGTATGAGTGCATGGCAGAGAC  972

seq1  TGGAGAAGGCGCCTGCCTACAGGAAGGTGTTCAAGGCCTGCAACCTGAAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAGGCGCCTGCCTACAGGAAGGTGTTCAAGGCCTGCAACCTGAAG  1022

seq1  AATGGCAGCCCCTTCCTGACTCTGAAGCACTTGGGAGTGCAGACCAGTGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAGCCCCTTCCTGACTCTGAAGCACTTGGGAGTGCAGACCAGTGA  1072

seq1  GGAGGGCATGCTGCTCTCCACCATCCACGAGGTGGCGGTGCTGAGGCACC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCATGCTGCTCTCCACCATCCACGAGGTGGCGGTGCTGAGGCACC  1122

seq1  TGGAGAATTC  1159
      ||||||||||
seq2  TGGAGAATTC  1132