BAC Information

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BAC

Clone NameB6Ng01-092P08
Chromosome14 (Build37)
Map Location 88,274,070 - 88,419,158
singlet/doubletdoublet
Overlap genenone
Upstream geneDiap3, EG665324, Tdrd3
Downstream geneLOC100043317, LOC100043780, LOC668624, LOC668625, Pcdh20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092P08.bB6Ng01-092P08.g
ACCDH904577DH904578
length9301,065
definitionDH904577|Mus musculus domesticus DNA, BAC clone: B6Ng01-092P08, 5' end.DH904578|Mus musculus domesticus DNA, BAC clone: B6Ng01-092P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,418,229 - 88,419,158)(88,274,070 - 88,275,142)
sequence
gaattctaaactttgaaagtaaaacaccatgtctttgtttccctcaaata
ctttgccctgatcttattatgaaattaagagaatctctcattctaaaagc
caaggcatcttaatgatctttatatatttgtcaagaaatgaagtgggatg
aaaatttcctattagctattcatatttagttatttttaaagctgcagtag
ttaaacacttggcagaaacaacttggtcaggttaaatttgtataaaagtt
ttgcttgctatttttagattttaatatactatgtgttatcctatgcttgc
ctcagaaaggtaatggatttataacaagtggccaatattgagatcttggt
aagttaccttattgtttctagtaattcatggataactctggcattagtat
agacacagtaatttaatcaatgataataaaagttttgtttctcctctcat
aatttttaatgtagttgattctctcactgccagctatacaagactaaaca
tcaatagaactgaaagccaagtgagtgaactttgttagttcgtaaatgca
gtgagagcatttttttcttatcatctgaaaacttttatgtgtaagtcatt
ttgtaagtatctcctgtctttaacaattaagaacactttcatattctttc
ttatatctttaactttatttcacctaaattcggaagtttatggcaaaatg
tgttccaatggccacattatcttcttttggggggggcatgatatctgtag
tgatttcagccttttgaatcctaatactgtccatttgttccccatttccc
ttttttatttaattttcttaatgaattcatgtgtcttagttctttttagt
gaaagattctttttatttaacttcattattttcaactgcttttttggttt
ttgttggttggtttgttttgtttgttttgt
gaattctctgccaataaggaaagctcattatcaaggaccctggggatggt
taataaaaaaaaaatagccagatagaacttcagcttgttttcaatttata
ttgtgctttgaaggcaaccatttcagatttgtaggaggcacatgtagttg
gccaatgtactggcaataactaaaaggtagtgttcaaaccatgcactagt
cacaatgacctcagcttctctttacttcttcctgagcctgagtgatctgg
ctgttgtcctccagaagtggaattagaagctgatgactccttggattttg
gtaatattagacagtatttttaataatagtccatatcacaataaataggt
aatacagatgagaaataaccatctttctttctttttttttctttcaactt
tctttccttctttctttaattttggaagtagaatcttcaaacttcatggg
ccagtatggaacttgattgtcctgcctcagcgtcccaagtgctgggattg
tagttatacattatcactctgagtaaagaaacaatatttgcaaaaccaca
gaggtctccaaattatttgttagttcagtacaatttaagcaaaactaatt
agatccagaaattgttaggaggagtagactattgccttaacaatacctta
aacatgtaacctagaattatgcccatacgttgctctgtgcttgcagttca
cattttcttcatgaagaatactgttggtgaaggctctttctgggacaatg
ttgcaccacgtgaggtacaaccattcaaaattatttcacatttatgctaa
aagacagcattgggaaataataactttttttggtccaagaaaatcttgtg
atcaagtcttcttgaggaaaactaggtctaagtccaagcccttattcttt
tagtgtatgactatgggaatttttttagttcattgagattctgatcctat
ttaggctaaagtgatatattttcatgaattgagttaatgaaactcctaat
gttaatatgtatttgatagtgtgggagaacttagaaacattaagctccaa
actgagtaggatcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_88418229_88419158
seq2: B6Ng01-092P08.b_48_977 (reverse)

seq1  ACAAAACAAACAAAACAAACCAACCAACAAAAACCAAAAAAGCAGTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAACAAAACAAACCAACCAACAAAAACCAAAAAAGCAGTTGAA  50

seq1  AATAATGAAGTTAAATAAAAAGAATCTTTCACTAAAAAGAACTAAGACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGAAGTTAAATAAAAAGAATCTTTCACTAAAAAGAACTAAGACAC  100

seq1  ATGAATTCATTAAGAAAATTAAATAAAAAAGGGAAATGGGGAACAAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTCATTAAGAAAATTAAATAAAAAAGGGAAATGGGGAACAAATGG  150

seq1  ACAGTATTAGGATTCAAAAGGCTGAAATCACTACAGATATCATGCCCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATTAGGATTCAAAAGGCTGAAATCACTACAGATATCATGCCCCCC  200

seq1  CCAAAAGAAGATAATGTGGCCATTGGAACACATTTTGCCATAAACTTCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGAAGATAATGTGGCCATTGGAACACATTTTGCCATAAACTTCCG  250

seq1  AATTTAGGTGAAATAAAGTTAAAGATATAAGAAAGAATATGAAAGTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGGTGAAATAAAGTTAAAGATATAAGAAAGAATATGAAAGTGTTC  300

seq1  TTAATTGTTAAAGACAGGAGATACTTACAAAATGACTTACACATAAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGTTAAAGACAGGAGATACTTACAAAATGACTTACACATAAAAGT  350

seq1  TTTCAGATGATAAGAAAAAAATGCTCTCACTGCATTTACGAACTAACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGATGATAAGAAAAAAATGCTCTCACTGCATTTACGAACTAACAAA  400

seq1  GTTCACTCACTTGGCTTTCAGTTCTATTGATGTTTAGTCTTGTATAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTCACTTGGCTTTCAGTTCTATTGATGTTTAGTCTTGTATAGCTG  450

seq1  GCAGTGAGAGAATCAACTACATTAAAAATTATGAGAGGAGAAACAAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGAGAGAATCAACTACATTAAAAATTATGAGAGGAGAAACAAAACT  500

seq1  TTTATTATCATTGATTAAATTACTGTGTCTATACTAATGCCAGAGTTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATCATTGATTAAATTACTGTGTCTATACTAATGCCAGAGTTATC  550

seq1  CATGAATTACTAGAAACAATAAGGTAACTTACCAAGATCTCAATATTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATTACTAGAAACAATAAGGTAACTTACCAAGATCTCAATATTGGC  600

seq1  CACTTGTTATAAATCCATTACCTTTCTGAGGCAAGCATAGGATAACACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTTATAAATCCATTACCTTTCTGAGGCAAGCATAGGATAACACAT  650

seq1  AGTATATTAAAATCTAAAAATAGCAAGCAAAACTTTTATACAAATTTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATTAAAATCTAAAAATAGCAAGCAAAACTTTTATACAAATTTAAC  700

seq1  CTGACCAAGTTGTTTCTGCCAAGTGTTTAACTACTGCAGCTTTAAAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCAAGTTGTTTCTGCCAAGTGTTTAACTACTGCAGCTTTAAAAATA  750

seq1  ACTAAATATGAATAGCTAATAGGAAATTTTCATCCCACTTCATTTCTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATATGAATAGCTAATAGGAAATTTTCATCCCACTTCATTTCTTGA  800

seq1  CAAATATATAAAGATCATTAAGATGCCTTGGCTTTTAGAATGAGAGATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATATAAAGATCATTAAGATGCCTTGGCTTTTAGAATGAGAGATTC  850

seq1  TCTTAATTTCATAATAAGATCAGGGCAAAGTATTTGAGGGAAACAAAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATTTCATAATAAGATCAGGGCAAAGTATTTGAGGGAAACAAAGAC  900

seq1  ATGGTGTTTTACTTTCAAAGTTTAGAATTC  930
      ||||||||||||||||||||||||||||||
seq2  ATGGTGTTTTACTTTCAAAGTTTAGAATTC  930

seq1: chr14_88274070_88275142
seq2: B6Ng01-092P08.g_70_1134

seq1  GAATTCTCTGCCAATAAGGAAAGCTCATTATCAAGGACCCTGGGGATGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCCAATAAGGAAAGCTCATTATCAAGGACCCTGGGGATGGT  50

seq1  TAATAAAAAAAAAATAGCCAGATAGAACTTCAGCTTGTTTTCAATTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAAAAAAATAGCCAGATAGAACTTCAGCTTGTTTTCAATTTATA  100

seq1  TTGTGCTTTGAAGGCAACCATTTCAGATTTGTAGGAGGCACATGTAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTTTGAAGGCAACCATTTCAGATTTGTAGGAGGCACATGTAGTTG  150

seq1  GCCAATGTACTGGCAATAACTAAAAGGTAGTGTTCAAACCATGCACTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATGTACTGGCAATAACTAAAAGGTAGTGTTCAAACCATGCACTAGT  200

seq1  CACAATGACCTCAGCTTCTCTTTACTTCTTCCTGAGCCTGAGTGATCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGACCTCAGCTTCTCTTTACTTCTTCCTGAGCCTGAGTGATCTGG  250

seq1  CTGTTGTCCTCCAGAAGTGGAATTAGAAGCTGATGACTCCTTGGATTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTCCTCCAGAAGTGGAATTAGAAGCTGATGACTCCTTGGATTTTG  300

seq1  GTAATATTAGACAGTATTTTTAATAATAGTCCATATCACAATAAATAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATTAGACAGTATTTTTAATAATAGTCCATATCACAATAAATAGGT  350

seq1  AATACAGATGAGAAATAACCATCTTTCTTTCTTTTTTTTTCTTTCAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGATGAGAAATAACCATCTTTCTTTCTTTTTTTTTCTTTCAACTT  400

seq1  TCTTTCCTTCTTTCTTTAATTTTGGAAGTAGAATCTTCAAACTTCATGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTTCTTTCTTTAATTTTGGAAGTAGAATCTTCAAACTTCATGGG  450

seq1  CCAGTATGGAACTTGATTGTCCTGCCTCAGCGTCCCAAGTGCTGGGATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATGGAACTTGATTGTCCTGCCTCAGCGTCCCAAGTGCTGGGATTG  500

seq1  TAGTTATACATTATCACTCTGAGTAAAGAAACAATATTTGCAAAACCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATACATTATCACTCTGAGTAAAGAAACAATATTTGCAAAACCACA  550

seq1  GAGGTCTCCAAATTATTTGTTAGTTCAGTACAATTTAAGCAAAACTAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTCCAAATTATTTGTTAGTTCAGTACAATTTAAGCAAAACTAATT  600

seq1  AGATCCAGAAATTGTTAGGAGGAGTAGACTATTGCCTTAACAATACCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCAGAAATTGTTAGGAGGAGTAGACTATTGCCTTAACAATACCTTA  650

seq1  AACATGTAACCTAGAATTATGCCCATACGTTGCTCTGTGCTTGCAGTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTAACCTAGAATTATGCCCATACGTTGCTCTGTGCTTGCAGTTCA  700

seq1  CATTTTCTTCATGAAGAATACTGTTGGTGAAGGCTCTTTCTGGGACAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTTCATGAAGAATACTGTTGGTGAAGGCTCTTTCTGGGACAATG  750

seq1  TTGCACCACGTGAGGTACAACCATTCAAAATTATTTCACATTTATGCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACCACGTGAGGTACAACCATTCAAAATTATTTCACATTTATGCTAA  800

seq1  AAGACAGCATT-GGAAATAATAAC-TTTTTTGGTCCAAGAAAATCTTGTG  848
      ||||||||||| |||||||||||| |||||||||||||||||||||||||
seq2  AAGACAGCATTGGGAAATAATAACTTTTTTTGGTCCAAGAAAATCTTGTG  850

seq1  ATCAAGTCTTCTTGAGGAAAACTAGGTCTAAGTCCAAGCCCTTATTCTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTCTTCTTGAGGAAAACTAGGTCTAAGTCCAAGCCCTTATTCTTT  900

seq1  TAAGTGTATGACTATGGGAAATTTTTTAAGTTCATTGAGATTCTGAATCC  948
      | |||||||||||||||| |||||||| ||||||||||||||||| ||||
seq2  T-AGTGTATGACTATGGG-AATTTTTTTAGTTCATTGAGATTCTG-ATCC  947

seq1  TATTTTAGGCTAAAGTTGATAATATTTTCCATGAAATTGAGTTAATGAAA  998
      || |||||||||||| |||| ||||||| |||| ||||||||||||||||
seq2  TA-TTTAGGCTAAAG-TGAT-ATATTTT-CATG-AATTGAGTTAATGAAA  992

seq1  CTCCTAATGTTTTATATGTATTTGATAGTGTTGTGAG-ACTTAGAAACAT  1047
      ||||||||| || ||||||||||||||||| || ||| ||||||||||||
seq2  CTCCTAATG-TTAATATGTATTTGATAGTG-TGGGAGAACTTAGAAACAT  1040

seq1  ATAGCTCCAAAACTGAGTAGTATCTA  1073
        |||||| ||||||||||| |||||
seq2  TAAGCTCC-AAACTGAGTAGGATCTA  1065