BAC Information

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BAC

Clone NameB6Ng01-093I17
Chromosome14 (Build37)
Map Location 84,446,517 - 84,447,520
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776
Downstream geneLOC100043280, LOC100043285, Pcdh17, 9630013A20Rik, LOC629794
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093I17.bB6Ng01-093I17.g
ACCDH905004DH905005
length1,260998
definitionDH905004|Mus musculus domesticus DNA, BAC clone: B6Ng01-093I17, 5' end.DH905005|Mus musculus domesticus DNA, BAC clone: B6Ng01-093I17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactatggaatactgaatggttgaaaagcacctgagtatatg
ttcagcatagtcttcagggaaatgccaatcaaaacaacttaaacttaatt
gtgagaccataattatctagaattcaactccatcagagcctgagaaggat
aaatattaactgagaaacagaaagtacagagaaaggagattccaaatcta
tagaaataacagaggttgctggctatctggacagcctcctaaagtttctc
tgcaacactggagtatccatttgcagcctcctgttgcagtatatgtatat
gcaatagaaggtataagtttaagtagaaagcactgtgaggaaagcactgt
gggagcagtcaaacagaggtaggttttttggccagtggctaggtttgctt
cattttaagcaaactccatatggaggttctttgatgcccatcatcttctt
tgaagttgtgtgtgggtcctactaggcacagacacgtcttactgtcataa
agatccttatgttaattaaacatattcaagtgctgaatttggtagagtat
tgaggctgtttttgcatttatgagatttattttattatttatttatttgt
ttatacattttgctagtatttggttattaatatatcttttttctttttta
ttagatattttctttatttacatttcagatgtttcctgctttcctgattc
cccctatgaaaactccctatcccccccccccacctttctcatcaacccac
ccactcctgtttcctgtccctggcatccctctacactggggatgtacagc
cttcacaggatcaagggcctctcctcccattgatgaccgacaaggccatt
tctgctatatatatagctggcactatgaatccctccatgtgtattccttg
gttggtggtttaatcctgagagctctgtctatctatggatagtatattcc
tagtttctagatattaatatctgtttaactttgagatcatctacaggagg
gtaaataaattttaattttgtatcaaaccagtttttaacatgaccaacta
ctaacttagagttctgattatctaaacaattcataatggtaggtttccaa
aggtcgagctcaccataattttgtgaatgattactaaggtatagatctaa
taagggtggaactattaagtatgtttagcaaatagttaattgtatatcaa
atccatgactggcaaaataggctatatcgcttaggtagagagttagattg
actgtgttta
gaattcttagggccaggaaatattacttcacaccaaaaggagaaatagat
ataataatgacttgtagccaggcagtggtggcgcacacctttaatcccag
cactcgggaggcagaggcaggcagatttctgagtttaagttcagcctgtt
caacagaacgagctccaggacagccagggctgtacagagaaaccttgtct
caaaaaaccaacacacacacgaacatacatatgtatatatataatttgta
ttacacctctcaaattaataacagcctaaataaaactctaagttctgaga
ctttatgtactatatatgttcattgattttaatgaatttatgtctctggt
agaaatgctggaatgatggtcattcttcatgtgatgaatctaagaaggac
ttagaaatctcatttgtatcttttatattttctgtaatacaacatcatcc
tcaaagaaaatatgctgttaatttaccttttaaaatctatgtgtgaataa
cgtattactttgtagaacagtgttgcacaacatttttttcctcttgatgc
aagaccagcccacatagtaaatgtattaaattttacagaccatcaacagt
ttcttgtgcatagtattcagtgaaatatttatgttttcacttggattctt
tttttttaatgtttttgcaatatttatctttctgcatccaatttttttca
cttattgcgcatatttccactcagattcatttccagcaaaagacatcact
ttcaaacatgggaaaatcttaaccatttgtaggaaaaaaatcccctaact
ttagctcatcaattaagtctagatataagacggtaagatctcacttgaac
atttattctgttctcttgctttccatgtgtttagtgtgtatactacccga
gtcatatatatttttaccatgaagtctccactagtctgagcggatctgac
actgaggctcctggattcatggtattcaggaacagggaagatctgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_84446517_84447520
seq2: B6Ng01-093I17.g_67_1064

seq1  GAATTCTTAGGGCCAGGAAATATTACTTCACACCAAAAGGAGAAATAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGGCCAGGAAATATTACTTCACACCAAAAGGAGAAATAGAT  50

seq1  ATAATAATGACTTGTAGCCAGGCAGTGGTGGCGCACACCTTTAATCCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATGACTTGTAGCCAGGCAGTGGTGGCGCACACCTTTAATCCCAG  100

seq1  CACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTTAAGTTCAGCCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTTAAGTTCAGCCTGTT  150

seq1  CAACAGAACGAGCTCCAGGACAGCCAGGGCTGTACAGAGAAACCTTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAACGAGCTCCAGGACAGCCAGGGCTGTACAGAGAAACCTTGTCT  200

seq1  CAAAAAACCAACACACACACGAACATACATATGTATATATATAATTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACCAACACACACACGAACATACATATGTATATATATAATTTGTA  250

seq1  TTACACCTCTCAAATTAATAACAGCCTAAATAAAACTCTAAGTTCTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACCTCTCAAATTAATAACAGCCTAAATAAAACTCTAAGTTCTGAGA  300

seq1  CTTTATGTACTATATATGTTCATTGATTTTAATGAATTTATGTCTCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGTACTATATATGTTCATTGATTTTAATGAATTTATGTCTCTGGT  350

seq1  AGAAATGCTGGAATGATGGTCATTCTTCATGTGATGAATCTAAGAAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGCTGGAATGATGGTCATTCTTCATGTGATGAATCTAAGAAGGAC  400

seq1  TTAGAAATCTCATTTGTATCTTTTATATTTTCTGTAATACAACATCATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATCTCATTTGTATCTTTTATATTTTCTGTAATACAACATCATCC  450

seq1  TCAAAGAAAATATGCTGTTAATTTACCTTTTAAAATCTATGTGTGAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAAATATGCTGTTAATTTACCTTTTAAAATCTATGTGTGAATAA  500

seq1  CGTATTACTTTGTAGAACAGTGTTGCACAACATTTTTTTCCTCTTGATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATTACTTTGTAGAACAGTGTTGCACAACATTTTTTTCCTCTTGATGC  550

seq1  AAGACCAGCCCACATAGTAAATGTATTAAATTTTACAGACCATCAACAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAGCCCACATAGTAAATGTATTAAATTTTACAGACCATCAACAGT  600

seq1  TTCTTGTGCATAGTATTCAGTGAAATATTTATGTTTTCACTTGGATTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGCATAGTATTCAGTGAAATATTTATGTTTTCACTTGGATTCTT  650

seq1  TTTTTTTAATGTTTTTGCAATATTTATCTTTCTGCATCCAATTTTTTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAATGTTTTTGCAATATTTATCTTTCTGCATCCAATTTTTTTCA  700

seq1  CTTATTGCGCATATTTCCACTCAGATTCATTTCCAGCAAAAGACATCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGCGCATATTTCCACTCAGATTCATTTCCAGCAAAAGACATCACT  750

seq1  TTCAAACATGGGAAAATCTTAACCATTTGTAGGAAAAAAAATCCCCTAAC  800
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCAAACATGGGAAAATCTTAACCATTTGTAGG-AAAAAAATCCCCTAAC  799

seq1  TTTAGCTCATCAATTAAGTCTAGATATAAGACGGTAAGATCTCACTTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTCATCAATTAAGTCTAGATATAAGACGGTAAGATCTCACTTGAA  849

seq1  CATTTATTCTGTTCTCTTGCTTTCCATGTGTTTTAGTGTGTATACTACCC  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CATTTATTCTGTTCTCTTGCTTTCCATGTG-TTTAGTGTGTATACTACCC  898

seq1  GAGTCATATATATTTTTACCATGAAGTCCTCCACTAGTCTGAGC-GATCT  949
      ||||||||||||||||||||||||||| |||||||||||||||| |||||
seq2  GAGTCATATATATTTTTACCATGAAGT-CTCCACTAGTCTGAGCGGATCT  947

seq1  GACAGCTGAGGGCCTCTTGAATCCATGGTATCCAGGACCAGGGAAGAATC  999
      |||| ||||||  ||| || || |||||||| ||||| |||||||| |||
seq2  GACA-CTGAGG--CTCCTGGATTCATGGTATTCAGGAACAGGGAAG-ATC  993

seq1  TGGGT  1004
      |||||
seq2  TGGGT  998