BAC Information

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BAC

Clone NameB6Ng01-094B08
Chromosome14 (Build37)
Map Location 122,290,676 - 122,422,543
singlet/doubletdoublet
Overlap genePhgdhl1, Gpr18, Ebi2
Upstream geneRanbp5, Farp1, LOC100043837, Stk24, Slc15a1, LOC100043577, Dock9, LOC668843
Downstream geneTimm8a2, Tm9sf2, LOC621710, Clybl, 1700108J01Rik, EG328479, EG432907, Zic5, Zic2, ENSMUSG00000075465, LOC668847, Pcca, BC006662, 4930594M22Rik, Tmtc4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094B08.bB6Ng01-094B08.g
ACCDH905395DH905396
length9951,150
definitionDH905395|Mus musculus domesticus DNA, BAC clone: B6Ng01-094B08, 5' end.DH905396|Mus musculus domesticus DNA, BAC clone: B6Ng01-094B08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,421,551 - 122,422,543)(122,290,676 - 122,291,831)
sequence
gaattctcttaggtagcctcacttgccaatatggaagaactgataaggcc
tgaaagtggcctgtggcttctgagctggtccaggcagctggttctctgta
tgtcaggtctcaccaagagatggctgggactgtgcccaagtctcacagac
tcacaagtgcctatggctttgaaatgaaataatttggttattatgaaagt
tgatggataaagaatgaagaaggtgggaaatacaccttgcttagcatgtc
tgatgctatgtgtttgattccgaacactgaaaaagaaagaggggaaggag
ggtgctttccctaggaactgagccgaatgttggcaaatgactccccaaac
caccaaagctgtcatcagaacaggagtgtaacagctagaagggctcgata
gggcggggtggaaaactagaaggattacacccaacccccatggctgcatt
ttgataatgaaatcccagctgcatctcagtgtcgatctgtggtgtagact
gaatgctcaccctgcagtccgtcgctcaagaggctgaagtaaaagaattg
ctgggatttcgaggccagcttgggttacatagcaaggtcctgtctttaga
ggaaaacaggacgactcgggggtggggaagcagctcagttgggggagagc
ttgcacagtgcacacagctctgggaccaaataaacacaatgtgatggtgc
acagctgtgacccaatcaatcactagggaggtggaggcagaagttcaagg
tcatccttggctatatagtgaatttgaggccagcctgggctacttgaggg
ccaaccaaacaagccaaaataaaatacccacacaaacctgtaccaataac
taaagacatggggattttaaagatgcaaagagtatacacttctacatact
atatataattcaccaccagttgtacaggctgagttgtgagagcttctaat
acaggaaaatctttccaaagagttggtggtgatggggggggaagg
gaattcctggcataatccgtagattccagtatggaaatgagcaatgagcg
cctctgtgagtttgaggccagccaggactacacagtgaggccctgcctca
aaaagaaacaagagatggaatatacagtgtaccctctgcactttgtttcc
taattatgtgtcatatgtgtatggtgtttccgtcgtgattcaatagcaag
ccttccctgatttgcctctgagttgatttttatatggaaaataaaaatca
ttagctcttctaacattcattgctctggttgtgtatttattgtggaatca
agggccatggttgcacttaccaggttggttctctgtagctgctctttggg
tcttgtatcatctgtcttggcatcttttttttgttttgtttccctgctgg
agtgaacttttcatgtgacatcataggctgcgaactttatttgcttagta
tttatctgtgtgcctgcttgtcagtacatgcaccatgtgtgcatagtgcc
tgtggaggacagaagagaatattcctggaactagagttacaagtacctgc
gagccaccccatggtgggggtgctagggaaggaacccttgagcttttgat
cctcctgcctccacctgagccctgggattccaggcatcatgttgccaccc
tgaccgatgcgtgatgcatttcagtggaatgggacccagtgcttcacgca
tgctagtcaaacatttggtcagctaagctttgtacaccagatgtttggct
ggggcaggggctggcaaatggctgttgagaatttgataagtcattccagt
cagtgggctcatctcttcttgtgaattttctctctgagtgaagttgtctg
tctgtccagcatcccatcttcttccctgtcatccttaccgtcatcttctc
tgaaatttgacatcaccccaagctcacgtctcctttgaaacttccagccc
tgtgtgtgctgctccgttgtagaatgtactgtaggattttatttgctggg
taagcttctttcaagtaagctgtatgtgagaaagaatgtgaagagtaaaa
cttgggagggatatcatggcccaggtggcccaccaatgtgccagtggcca
tttctgccacatagagtagctttaacggatggccctgggttagttcatat

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_122421551_122422543
seq2: B6Ng01-094B08.b_46_1040 (reverse)

seq1  CCTT-CCCACCCATCACCACC-ACTCTTTGGAAAGATTTTCCTGTATTAG  48
      |||| ||| |||||||||||| ||||||||||||||||||||||||||||
seq2  CCTTCCCCCCCCATCACCACCAACTCTTTGGAAAGATTTTCCTGTATTAG  50

seq1  AAGCTCTCACAACTCAGGCTGTAC-ACTGGTGGTGAATTTATATATAGTA  97
      ||||||||||||||||| |||||| |||||||||||| ||||||||||||
seq2  AAGCTCTCACAACTCAGCCTGTACAACTGGTGGTGAA-TTATATATAGTA  99

seq1  TTGTAGAAGTGTATACTCTTTGCATCTTTAAAAT-CCCATGTCTTTAGTT  146
       ||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  -TGTAGAAGTGTATACTCTTTGCATCTTTAAAATCCCCATGTCTTTAGTT  148

seq1  ATTGGTACAGGTTTGTGTGGGTATTTTATTTTGGCTTGTTTGGTTGGCCC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTACAGGTTTGTGTGGGTATTTTATTTTGGCTTGTTTGGTTGGCCC  198

seq1  TCAAGTAGCCCAGGCTGGCCTCAAATTCACTATATAGCCAAGGATGACCT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTAGCCCAGGCTGGCCTCAAATTCACTATATAGCCAAGGATGACCT  248

seq1  TGAACTTCTGCCTCCACCTCCCTAGTGATTGATTGGGTCACAGCTGTGCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTCTGCCTCCACCTCCCTAGTGATTGATTGGGTCACAGCTGTGCA  298

seq1  CCATCACATTGTGTTTATTTGGTCCCAGAGCTGTGTGCACTGTGCAAGCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACATTGTGTTTATTTGGTCCCAGAGCTGTGTGCACTGTGCAAGCT  348

seq1  CTCCCCCAACTGAGCTGCTTCCCCACCCCCGAGTCGTCCTGTTTTCCTCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCAACTGAGCTGCTTCCCCACCCCCGAGTCGTCCTGTTTTCCTCT  398

seq1  AAAGACAGGACCTTGCTATGTAACCCAAGCTGGCCTCGAAATCCCAGCAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGGACCTTGCTATGTAACCCAAGCTGGCCTCGAAATCCCAGCAA  448

seq1  TTCTTTTACTTCAGCCTCTTGAGCGACGGACTGCAGGGTGAGCATTCAGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTACTTCAGCCTCTTGAGCGACGGACTGCAGGGTGAGCATTCAGT  498

seq1  CTACACCACAGATCGACACTGAGATGCAGCTGGGATTTCATTATCAAAAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACCACAGATCGACACTGAGATGCAGCTGGGATTTCATTATCAAAAT  548

seq1  GCAGCCATGGGGGTTGGGTGTAATCCTTCTAGTTTTCCACCCCGCCCTAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCATGGGGGTTGGGTGTAATCCTTCTAGTTTTCCACCCCGCCCTAT  598

seq1  CGAGCCCTTCTAGCTGTTACACTCCTGTTCTGATGACAGCTTTGGTGGTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCCTTCTAGCTGTTACACTCCTGTTCTGATGACAGCTTTGGTGGTT  648

seq1  TGGGGAGTCATTTGCCAACATTCGGCTCAGTTCCTAGGGAAAGCACCCTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGTCATTTGCCAACATTCGGCTCAGTTCCTAGGGAAAGCACCCTC  698

seq1  CTTCCCCTCTTTCTTTTTCAGTGTTCGGAATCAAACACATAGCATCAGAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCTCTTTCTTTTTCAGTGTTCGGAATCAAACACATAGCATCAGAC  748

seq1  ATGCTAAGCAAGGTGTATTTCCCACCTTCTTCATTCTTTATCCATCAACT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAGCAAGGTGTATTTCCCACCTTCTTCATTCTTTATCCATCAACT  798

seq1  TTCATAATAACCAAATTATTTCATTTCAAAGCCATAGGCACTTGTGAGTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAATAACCAAATTATTTCATTTCAAAGCCATAGGCACTTGTGAGTC  848

seq1  TGTGAGACTTGGGCACAGTCCCAGCCATCTCTTGGTGAGACCTGACATAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGACTTGGGCACAGTCCCAGCCATCTCTTGGTGAGACCTGACATAC  898

seq1  AGAGAACCAGCTGCCTGGACCAGCTCAGAAGCCACAGGCCACTTTCAGGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACCAGCTGCCTGGACCAGCTCAGAAGCCACAGGCCACTTTCAGGC  948

seq1  CTTATCAGTTCTTCCATATTGGCAAGTGAGGCTACCTAAGAGAATTC  993
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCAGTTCTTCCATATTGGCAAGTGAGGCTACCTAAGAGAATTC  995

seq1: chr14_122290676_122291831
seq2: B6Ng01-094B08.g_70_1219

seq1  GAATTCCTGGCATAATCCGTAGATTCCAGTATGGAAATGAGCAATGAGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGCATAATCCGTAGATTCCAGTATGGAAATGAGCAATGAGCG  50

seq1  CCTCTGTGAGTTTGAGGCCAGCCAGGACTACACAGTGAGGCCCTGCCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTGAGTTTGAGGCCAGCCAGGACTACACAGTGAGGCCCTGCCTCA  100

seq1  AAAAGAAACAAGAGATGGAATATACAGTGTACCCTCTGCACTTTGTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAACAAGAGATGGAATATACAGTGTACCCTCTGCACTTTGTTTCC  150

seq1  TAATTATGTGTCATATGTGTATGGTGTTTCCGTCGTGATTCAATAGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATGTGTCATATGTGTATGGTGTTTCCGTCGTGATTCAATAGCAAG  200

seq1  CCTTCCCTGATTTGCCTCTGAGTTGATTTTTATATGGAAAATAAAAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCTGATTTGCCTCTGAGTTGATTTTTATATGGAAAATAAAAATCA  250

seq1  TTAGCTCTTCTAACATTCATTGCTCTGGTTGTGTATTTATTGTGGAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCTTCTAACATTCATTGCTCTGGTTGTGTATTTATTGTGGAATCA  300

seq1  AGGGCCATGGTTGCACTTACCAGGTTGGTTCTCTGTAGCTGCTCTTTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCATGGTTGCACTTACCAGGTTGGTTCTCTGTAGCTGCTCTTTGGG  350

seq1  TCTTGTATCATCTGTCTTGGCATCTTTTTTTTGTTTTGTTTCCCTGCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTATCATCTGTCTTGGCATCTTTTTTTTGTTTTGTTTCCCTGCTGG  400

seq1  AGTGAACTTTTCATGTGACATCATAGGCTGCGAACTTTATTTGCTTAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACTTTTCATGTGACATCATAGGCTGCGAACTTTATTTGCTTAGTA  450

seq1  TTTATCTGTGTGCCTGCTTGTCAGTACATGCACCATGTGTGCATAGTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTGTGTGCCTGCTTGTCAGTACATGCACCATGTGTGCATAGTGCC  500

seq1  TGTGGAGGACAGAAGAGAATATTCCTGGAACTAGAGTTACAAGTACCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGGACAGAAGAGAATATTCCTGGAACTAGAGTTACAAGTACCTGC  550

seq1  GAGCCACCCCATGGTGGGGGTGCTAGGGAAGGAACCCTTGAGCTTTTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACCCCATGGTGGGGGTGCTAGGGAAGGAACCCTTGAGCTTTTGAT  600

seq1  CCTCCTGCCTCCACCTGAGCCCTGGGATTCCAGGCATCATGTTGCCACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGCCTCCACCTGAGCCCTGGGATTCCAGGCATCATGTTGCCACCC  650

seq1  TGACCGATGCGTGATGCATTTCAGTGGAATGGGACCCAGTGCTTCACGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCGATGCGTGATGCATTTCAGTGGAATGGGACCCAGTGCTTCACGCA  700

seq1  TGCTAGTCAAACATTTGGTCAGCTAAGCTTTGTACACCAGATGTTTGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTCAAACATTTGGTCAGCTAAGCTTTGTACACCAGATGTTTGGCT  750

seq1  GGGGCAGGGGCTGGCAAATGGCTGTTGAGAATTTGATAAGTCATTCCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGGGGCTGGCAAATGGCTGTTGAGAATTTGATAAGTCATTCCAGT  800

seq1  CAGGTGGGCTCATCTCTTCTTGTGAATTTTCTCTCTGAGTGAAGTTGTCT  850
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-GTGGGCTCATCTCTTCTTGTGAATTTTCTCTCTGAGTGAAGTTGTCT  849

seq1  GTCTGTCCAGCATCCCATCTTCTTCCCTGTCATCCTTACCGTCATCTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCCAGCATCCCATCTTCTTCCCTGTCATCCTTACCGTCATCTTCT  899

seq1  CTGAAATTTGACATCACCCCAAGCTCACGTCTCCTTTGAGACTTCCAGCC  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGAAATTTGACATCACCCCAAGCTCACGTCTCCTTTGAAACTTCCAGCC  949

seq1  CTGTGTGTGCTGCTCCCGTTGTAGAATGTTACTGTAGGATTTTATTTGCT  1000
      |||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  CTGTGTGTGCTGCT-CCGTTGTAGAATG-TACTGTAGGATTTTATTTGCT  997

seq1  GGGTAAGCCTTCTTTCCAGGTAGGCTGTATGTGAGAAAGAATGTG-AGAG  1049
      ||||||| ||||||| || ||| |||||||||||||||||||||| ||||
seq2  GGGTAAG-CTTCTTT-CAAGTAAGCTGTATGTGAGAAAGAATGTGAAGAG  1045

seq1  T-AGACTTGGGAGGGATATCATGGCCCAAGTGGCCCAGCAATGTGCTCAG  1098
      | | |||||||||||||||||||||||| |||||||| |||||||| |||
seq2  TAAAACTTGGGAGGGATATCATGGCCCAGGTGGCCCACCAATGTGC-CAG  1094

seq1  TGG-CATTTCTGCCAC-TAGAGGTAGCTTTAAACAGTATGGGGCCCT-GG  1145
      ||| |||||||||||| |||| ||||||||||   | ||  |||||| ||
seq2  TGGCCATTTCTGCCACATAGA-GTAGCTTTAA--CGGAT--GGCCCTGGG  1139

seq1  TTAGTTCATAT  1156
      |||||||||||
seq2  TTAGTTCATAT  1150