BAC Information

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BAC

Clone NameB6Ng01-094B10
Chromosome14 (Build37)
Map Location 48,233,531 - 48,395,300
singlet/doubletdoublet
Overlap geneKtn1
Upstream geneCdkn3, Cnih, Gmfb, Cgrrf1, Samd4, Gch1, Wdhd1, Socs4, LOC670795, C130032J12Rik, Lgals3, Dlg7, LOC666895, Fbxo34, D14Ertd436e, EG625730, LOC100042787
Downstream gene4930447J18Rik, Map1lc3-ps2, Peli2, EG624367, LOC100041831, 6720456H20Rik, 4930572G02Rik, Otx2, LOC100041864
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094B10.bB6Ng01-094B10.g
ACCDH905399DH905400
length728436
definitionDH905399|Mus musculus domesticus DNA, BAC clone: B6Ng01-094B10, 5' end.DH905400|Mus musculus domesticus DNA, BAC clone: B6Ng01-094B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,394,573 - 48,395,300)(48,233,531 - 48,233,972)
sequence
gaattcactttaagttgaaaatatcctgccgttccatacacctagcctgc
tgactctcttaacttctgtgtctcccttgtaatgcagtgcctgacccaga
actgctcctcactgccttttgcccagtgctgttagagaccatgccaccat
ctaccaccagcctgagagactatcagattgtgtatggcttctgtaccttt
agaaattcaaatgccccacgtcaagctgtcataagttgcaagtcatcttg
ctgataaacgatacgtatccgaatgtgagtcacacactaaatattagtgc
tgtttatttttacatcacaaaagaaagaactcatggtgttatccttctcc
cttctaatagatcatctttagcctgcgaaggactctcactgaacaacaaa
ttacacttgcaggatgttcccagcctccccgctctgcactcagaaaaatc
ttatttattgtcaggactcagctcgggactcttctttgggcagctcttcc
agacagcacctcccccaggtggagctgaaggttgagaccctctctgagca
ctgagcacgctgcacaaatgtgactgccgtccacttatcatgaattacaa
atgttcgtttaacctgccagctcccgaatcctggagatggctgtgttgat
gtgtttcacctgcgcttttcaggcagctcctggagtacggtatgtatgga
tatttttttaatgtttgggggggggggg
tgtagcccaggagatggggtgcccttccctatataatccaatcattttaa
ttacccgcctttttcttttttctattttcttttttaacctttgccctcct
ggctgctgtacctgctgtgcctctttcttacctctcccttccgtcctccc
tctccttacatgccttagggtcatggccactctgaactctcccagatgtc
cctgtctttagctattgtttcccttttatctataataaaatttctcctcc
accatacctacaagaagtcatggtctttcctttttctttcttttttcttt
catttacaaatgtctataacacaaaatggataaaagtcatttcatgaaag
taccctggagggaagactgaggacaaggatggggctagtccaggcagtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_48394573_48395300
seq2: B6Ng01-094B10.b_45_772 (reverse)

seq1  CCCCCCCCCCCCAAACATTAAAAAAATATCCATACATACCGTACTCCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCAAACATTAAAAAAATATCCATACATACCGTACTCCAGG  50

seq1  AGCTGCCTGAAAAGCGCAGGTGAAACACATCAACACAGCCATCTCCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCTGAAAAGCGCAGGTGAAACACATCAACACAGCCATCTCCAGGA  100

seq1  TTCGGGAGCTGGCAGGTTAAACGAACATTTGTAATTCATGATAAGTGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGGAGCTGGCAGGTTAAACGAACATTTGTAATTCATGATAAGTGGAC  150

seq1  GGCAGTCACATTTGTGCAGCGTGCTCAGTGCTCAGAGAGGGTCTCAACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTCACATTTGTGCAGCGTGCTCAGTGCTCAGAGAGGGTCTCAACCT  200

seq1  TCAGCTCCACCTGGGGGAGGTGCTGTCTGGAAGAGCTGCCCAAAGAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCACCTGGGGGAGGTGCTGTCTGGAAGAGCTGCCCAAAGAAGAG  250

seq1  TCCCGAGCTGAGTCCTGACAATAAATAAGATTTTTCTGAGTGCAGAGCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAGCTGAGTCCTGACAATAAATAAGATTTTTCTGAGTGCAGAGCGG  300

seq1  GGAGGCTGGGAACATCCTGCAAGTGTAATTTGTTGTTCAGTGAGAGTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTGGGAACATCCTGCAAGTGTAATTTGTTGTTCAGTGAGAGTCCT  350

seq1  TCGCAGGCTAAAGATGATCTATTAGAAGGGAGAAGGATAACACCATGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGGCTAAAGATGATCTATTAGAAGGGAGAAGGATAACACCATGAGT  400

seq1  TCTTTCTTTTGTGATGTAAAAATAAACAGCACTAATATTTAGTGTGTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTTGTGATGTAAAAATAAACAGCACTAATATTTAGTGTGTGAC  450

seq1  TCACATTCGGATACGTATCGTTTATCAGCAAGATGACTTGCAACTTATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTCGGATACGTATCGTTTATCAGCAAGATGACTTGCAACTTATGA  500

seq1  CAGCTTGACGTGGGGCATTTGAATTTCTAAAGGTACAGAAGCCATACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGACGTGGGGCATTTGAATTTCTAAAGGTACAGAAGCCATACACA  550

seq1  ATCTGATAGTCTCTCAGGCTGGTGGTAGATGGTGGCATGGTCTCTAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATAGTCTCTCAGGCTGGTGGTAGATGGTGGCATGGTCTCTAACAG  600

seq1  CACTGGGCAAAAGGCAGTGAGGAGCAGTTCTGGGTCAGGCACTGCATTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGCAAAAGGCAGTGAGGAGCAGTTCTGGGTCAGGCACTGCATTAC  650

seq1  AAGGGAGACACAGAAGTTAAGAGAGTCAGCAGGCTAGGTGTATGGAACGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGACACAGAAGTTAAGAGAGTCAGCAGGCTAGGTGTATGGAACGG  700

seq1  CAGGATATTTTCAACTTAAAGTGAATTC  728
      ||||||||||||||||||||||||||||
seq2  CAGGATATTTTCAACTTAAAGTGAATTC  728

seq1: chr14_48233531_48233972
seq2: B6Ng01-094B10.g_68_509

seq1  GAATTCTGTAGCCCAGGAGATGGGGTGCCCTTCCCTATATAATCCAATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGCCCAGGAGATGGGGTGCCCTTCCCTATATAATCCAATCA  50

seq1  TTTTAATTACCCGCCTTTTTCTTTTTTCTATTTTCTTTTTTAACCTTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTACCCGCCTTTTTCTTTTTTCTATTTTCTTTTTTAACCTTTGC  100

seq1  CCTCCTGGCTGCTGTACCTGCTGTGCCTCTTTCTTACCTCTCCCTTCCGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGGCTGCTGTACCTGCTGTGCCTCTTTCTTACCTCTCCCTTCCGT  150

seq1  CCTCCCTCTCCTTACATGCCTTAGGGTCATGGCCACTCTGAACTCTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCTCCTTACATGCCTTAGGGTCATGGCCACTCTGAACTCTCCCA  200

seq1  GATGTCCCTGTCTTTAGCTATTGTTTCCCTTTTATCTATAATAAAATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCCCTGTCTTTAGCTATTGTTTCCCTTTTATCTATAATAAAATTTC  250

seq1  TCCTCCACCATACCTACAAGAAGTCATGGTCTTTCCTTTTTCTTTCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACCATACCTACAAGAAGTCATGGTCTTTCCTTTTTCTTTCTTTT  300

seq1  TTCTTTCATTTACAAATGTCTATAACACAAAATGGATAAAAGTCATTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCATTTACAAATGTCTATAACACAAAATGGATAAAAGTCATTTCA  350

seq1  TGAAAGTACCCTGGAGGGAAGACTGAGGACAAGGATGGGGCTAGTCCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTACCCTGGAGGGAAGACTGAGGACAAGGATGGGGCTAGTCCAGG  400

seq1  CAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATA  442
      |||||||||||||||||||||||||||||||||||||||| |
seq2  CAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGA  442