BAC Information

Click to search

BAC

Clone NameB6Ng01-094G23
Chromosome14 (Build37)
Map Location 37,702,622 - 37,846,570
singlet/doubletdoublet
Overlap geneGcap14, LOC100040341, LOC670331
Upstream geneLOC665933, 4930474N05Rik
Downstream geneRgr, Lrrc21, Lrrc22, Pcdh21, 2610528A11Rik, Ghitm, LOC382871, LOC382872
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094G23.bB6Ng01-094G23.g
ACCDH905659DH905660
length1,0881,006
definitionDH905659|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G23, 5' end.DH905660|Mus musculus domesticus DNA, BAC clone: B6Ng01-094G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,845,479 - 37,846,570)(37,702,622 - 37,703,644)
sequence
gaattcccagcccaggctgctggatcttctctgagctttctttagtctgt
tctaagtactgaggtctgtagcttgcctgtttcttaatcttaagacccca
tttctctccttgaaagaagcagaattatatgtacgttgtctggagtgatt
gcagacagcgcccataaagtccccttttctctgccttcaaaagcatcacc
ggaaagtttagttggatgtgaaacttcagaaccctcccacataggacaga
ggtgccgctaggccacttatggcctggtctttgtctaacttggatgttag
gacactccctggacatttctggctttggagtctcgggtaaaaacaaaaca
aaaaccaaatcggtgacagtcatagctctggatgctgagattccatgtga
acaaacacaaactgtgaactactgagtgctgggtttgagggcactctggt
acagcccctggagaagcggctggtgcacattctcactgcgtgccctttaa
gggtaaacaatatttccgaggaacaagagctaggaaacttctggatgaaa
accaaaaagcacagcccctgagcctccgctctcctgtcaatcatggtcac
tggttgcttctttctcaagctgttccttggctccaatgctgcacacctgt
tcttctctctgcccatcaaactctcttaacaatggcctcccgttgtctct
gtgcgttgtttctttggctcagctgctctccccactgcagctgttggggc
atcggtgacagcttcgcccctctagggtaggagtcagtgtggcagcttgg
aaagcacttagaattcacagtcaggaaggacctgggcaagaatccaagtt
tttccacttagtcaatatgacagtctctggcaactccggcactccaggct
tcttttagcccctctgtaaacctttatgacaccccagtttagataatggt
ttagcaaacattctctcatccgcatatatgatgctgagtgataatctcaa
tcatttctgatgtctgacctctgttattgcgaactccgtgatagaagtta
ggtctagaaatccctaaagactcatgttttaccgagtg
gaattcatgcagcttatttataattttgataaataaagacataatttttc
aaaaaataaattttattctaaattgattaaaatttcccttaggactcctg
atactttacttaaggaaaaccagtgggaaaaaatggtagaaatcacagaa
caaaccatggagaaggtgtagaactagctctgattgactcttttttttca
ctaatattagcttttgggggtaggtgacttttcaaaaaaagataaaatac
agtcaacttaccaggtacagtaaaatatataatctaaagcagtcaagctg
tgtggcaggtcttgtaataactgaatcattaaaagtgttagtaaaccatg
catattcaacgccactgcttctatgaggtgaagcagctaacaaattataa
aagacattagtggttttaaaatggccttgaaattttttaaaagttttaga
tggtaattaaatacaggtaaagcctttgatgaggagatatttaagtgtgc
agtggtctagtaagcctgacccctaaacagtatgcatctgtccatcaagt
ctgtgcgcattttaaaagtcaataggtaagacgtaattttatcttataca
tttcatgatcttcgtaagatctacttaaagacagatgcatgccagcaggt
ctagggtcaccagtgaaaggtttccacagcattacagtgaaattaacctc
tggcggcttccaggaagccacagtggaggcttgtttgcatgcagtcaggg
aaaggttaggagagcagagcacgggagtgctcctggagcaggtgcctgca
gatgactggaggggcagaaggtattgagagggagggccatgcagcaggaa
taccatggagggaagccagagcagatgggagtgagagacacagactcact
ctgtctgcggtgcggcgtacagtccgtgcatcccctggagagcctgccca
ggagagaagagttgcacaatacccaccctgtgcagaaagatggggtaagg
agcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_37845479_37846570
seq2: B6Ng01-094G23.b_48_1135 (reverse)

seq1  CACTCG--TAAACATGAGTCTTTAGGGGGTATCTAAGACCTAAACTCTAT  48
      ||||||   ||||||||||||||| ||| | ||| ||||||||  |||||
seq2  CACTCGGTAAAACATGAGTCTTTA-GGGATTTCT-AGACCTAACTTCTAT  48

seq1  CACCGAGTTTGGCAATAACAGAGGTCAGACATCAGAAATGATGGAGGATA  98
      ||| ||| || ||||||||||||||||||||||||||||||| || ||| 
seq2  CACGGAG-TTCGCAATAACAGAGGTCAGACATCAGAAATGATTGA-GATT  96

seq1  ATCCACTCCAGCATCATATATTGCGGATGAGAGAATGTTTGCTAAACCAA  148
      || |||| |||||||||||| ||||||||||||||||||||||||||| |
seq2  AT-CACT-CAGCATCATATA-TGCGGATGAGAGAATGTTTGCTAAACC-A  142

seq1  TTATCTAAAACTGGGTGTCATAAAGGTTTTACAGAGGGGGCTAAAAGAAG  198
      |||||||||   |||||||||||||| |||||||| ||||||||||||||
seq2  TTATCTAAACTGGGGTGTCATAAAGG-TTTACAGA-GGGGCTAAAAGAAG  190

seq1  CCTGGAGTGCCGGAGTTGCCAGAGACTGTCATATTGACTAAGTGGAAAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGTGCCGGAGTTGCCAGAGACTGTCATATTGACTAAGTGGAAAAA  240

seq1  CTTGGATTCTTGCCCAGGT-CTTCCTGACTGTGAATTCTAAGTGCTTTCC  297
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTGGATTCTTGCCCAGGTCCTTCCTGACTGTGAATTCTAAGTGCTTTCC  290

seq1  AAGCTGCCACACTGACTCCTA-CCTAGAGGGGCGAAGCTGTCACCGATG-  345
      ||||||||||||||||||||| ||||||||||||||||||||||||||| 
seq2  AAGCTGCCACACTGACTCCTACCCTAGAGGGGCGAAGCTGTCACCGATGC  340

seq1  CCCAACAGCTGCAGTGGGGAGAGCAGCTGAGCCAAAGAAACAACGCACAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACAGCTGCAGTGGGGAGAGCAGCTGAGCCAAAGAAACAACGCACAG  390

seq1  AGACAAC-GGAGGCCATTGTTAAGAGAGTTTGATGGGCAGAGAGAAGAAC  444
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAACGGGAGGCCATTGTTAAGAGAGTTTGATGGGCAGAGAGAAGAAC  440

seq1  AGGTGTGCAGCATTGGAGCCAAGGAACAGCTTGAGAAAGAAGCAACCAGT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGCAGCATTGGAGCCAAGGAACAGCTTGAGAAAGAAGCAACCAGT  490

seq1  GACCATGATTGACAGGAGAGCGGAGGCTCAGGGGCTGTGCTTTTTGGTTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGATTGACAGGAGAGCGGAGGCTCAGGGGCTGTGCTTTTTGGTTT  540

seq1  TCATCCAGAAGTTTCCTAGCTCTTGTTCCTCGGAAATATTGTTTACCCTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCAGAAGTTTCCTAGCTCTTGTTCCTCGGAAATATTGTTTACCCTT  590

seq1  AAAGGGCACGCAGTGAGAATGTGCACCAGCCGCTTCTCCAGGGGCTGTAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGCACGCAGTGAGAATGTGCACCAGCCGCTTCTCCAGGGGCTGTAC  640

seq1  CAGAGTGCCCTCAAACCCAGCACTCAGTAGTTCACAGTTTGTGTTTGTTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGCCCTCAAACCCAGCACTCAGTAGTTCACAGTTTGTGTTTGTTC  690

seq1  ACATGGAATCTCAGCATCCAGAGCTATGACTGTCACCGATTTGGTTTTTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAATCTCAGCATCCAGAGCTATGACTGTCACCGATTTGGTTTTTG  740

seq1  TTTTGTTTTTACCCGAGACTCCAAAGCCAGAAATGTCCAGGGAGTGTCCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTACCCGAGACTCCAAAGCCAGAAATGTCCAGGGAGTGTCCT  790

seq1  AACATCCAAGTTAGACAAAGACCAGGCCATAAGTGGCCTAGCGGCACCTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCAAGTTAGACAAAGACCAGGCCATAAGTGGCCTAGCGGCACCTC  840

seq1  TGTCCTATGTGGGAGGGTTCTGAAGTTTCACATCCAACTAAACTTTCCGG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTATGTGGGAGGGTTCTGAAGTTTCACATCCAACTAAACTTTCCGG  890

seq1  TGATGCTTTTGAAGGCAGAGAAAAGGGGACTTTATGGGCGCTGTCTGCAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTTTTGAAGGCAGAGAAAAGGGGACTTTATGGGCGCTGTCTGCAA  940

seq1  TCACTCCAGACAACGTACATATAATTCTGCTTCTTTCAAGGAGAGAAATG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCAGACAACGTACATATAATTCTGCTTCTTTCAAGGAGAGAAATG  990

seq1  GGGTCTTAAGATTAAGAAACAGGCAAGCTACAGACCTCAGTACTTAGAAC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTAAGATTAAGAAACAGGCAAGCTACAGACCTCAGTACTTAGAAC  1040

seq1  AGACTAAAGAAAGCTCAGAGAAGATCCAGCAGCCTGGGCTGGGAATTC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAAAGAAAGCTCAGAGAAGATCCAGCAGCCTGGGCTGGGAATTC  1088

seq1: chr14_37702622_37703644
seq2: B6Ng01-094G23.g_67_1072

seq1  GAATTCATGCAGCTTATTTATAATTTTGATAAATAAAGACATAATTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCAGCTTATTTATAATTTTGATAAATAAAGACATAATTTTTC  50

seq1  AAAAAATAAATTTTATTCTAAATTGATTAAAATTTCCCTTAGGACTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAAATTTTATTCTAAATTGATTAAAATTTCCCTTAGGACTCCTG  100

seq1  ATACTTTACTTAAGGAAAACCAGTGGGAAAAAATGGTAGAAATCACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTACTTAAGGAAAACCAGTGGGAAAAAATGGTAGAAATCACAGAA  150

seq1  CAAACCATGGAGAAGGTGTAGAACTAGCTCTGATTGACTCTTTTTTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCATGGAGAAGGTGTAGAACTAGCTCTGATTGACTCTTTTTTTTCA  200

seq1  CTAATATTAGCTTTTGGGGGTAGGTGACTTTTCAAAAAAAGATAAAATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATTAGCTTTTGGGGGTAGGTGACTTTTCAAAAAAAGATAAAATAC  250

seq1  AGTCAACTTACCAGGTACAGTAAAATATATAATCTAAAGCAGTCAAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAACTTACCAGGTACAGTAAAATATATAATCTAAAGCAGTCAAGCTG  300

seq1  TGTGGCAGGTCTTGTAATAACTGAATCATTAAAAGTGTTAGTAAACCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCAGGTCTTGTAATAACTGAATCATTAAAAGTGTTAGTAAACCATG  350

seq1  CATATTCAACGCCACTGCTTCTATGAGGTGAAGCAGCTAACAAATTATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCAACGCCACTGCTTCTATGAGGTGAAGCAGCTAACAAATTATAA  400

seq1  AAGACATTAGTGGTTTTAAAATGGCCTTGAAATTTTTTAAAAGTTTTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTAGTGGTTTTAAAATGGCCTTGAAATTTTTTAAAAGTTTTAGA  450

seq1  TGGTAATTAAATACAGGTAAAGCCTTTGATGAGGAGATATTTAAGTGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATTAAATACAGGTAAAGCCTTTGATGAGGAGATATTTAAGTGTGC  500

seq1  AGTGGTCTAGTAAGCCTGACCCCTAAACAGTATGCATCTGTCCATCAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCTAGTAAGCCTGACCCCTAAACAGTATGCATCTGTCCATCAAGT  550

seq1  CTGTGCGCATTTTAAAAGTCAATAGGTAAGACGTAATTTTATCTTATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCGCATTTTAAAAGTCAATAGGTAAGACGTAATTTTATCTTATACA  600

seq1  TTTCATGATCTTCGTAAGATCTACTTAAAGACAGATGCATGCCAGCAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGATCTTCGTAAGATCTACTTAAAGACAGATGCATGCCAGCAGGT  650

seq1  CTAGGGTCACCAGTGAAAGGTTTCCACAGCATTACAGTGAAATTAACCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTCACCAGTGAAAGGTTTCCACAGCATTACAGTGAAATTAACCTC  700

seq1  TGGCGGCTTCCAGGAAGCCACAGTGGAGGCTTGTTTGCATGCAGTCAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGGCTTCCAGGAAGCCACAGTGGAGGCTTGTTTGCATGCAGTCAGGG  750

seq1  AAAGGTTAGGAGAGCAGAGCACGGGAGTGCTCCTGGAGCAGGTGCCTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTAGGAGAGCAGAGCACGGGAGTGCTCCTGGAGCAGGTGCCTGCA  800

seq1  GATGACTGGGAGGGGCAGAAGGTATTGGAGAGGGAGGGGCCATGCAGCAG  850
      ||||||| |||||||||||||||||| |||||||| ||||||||||||||
seq2  GATGACT-GGAGGGGCAGAAGGTATT-GAGAGGGA-GGGCCATGCAGCAG  847

seq1  GGAAATACCATGGAGGGGAAGCCAGAGCAGGATGGGAGTGAGAGACACAG  900
      |  ||||||||||| |||||||||||||| ||||||||||||||||||||
seq2  G--AATACCATGGA-GGGAAGCCAGAGCA-GATGGGAGTGAGAGACACAG  893

seq1  ACTCACTCTGTCTGCGGTGCGGCGGTACAGTCCGTGGCATCCCCTGGAAG  950
      ||||||||||||||||||||||| ||||||||||| ||||||||||||  
seq2  ACTCACTCTGTCTGCGGTGCGGC-GTACAGTCCGT-GCATCCCCTGGA--  939

seq1  GAGCCCTGCCAAGGAGAGAAGGAGGGTGCACAATACCCACCCTGTGCAGA  1000
      ||| |||||| ||||||||||   | ||||||||||||||||||||||||
seq2  GAG-CCTGCCCAGGAGAGAAG--AGTTGCACAATACCCACCCTGTGCAGA  986

seq1  AAGAGATGGGGTAGGGAGGCATA  1023
      |  |||||||||| ||| |||||
seq2  A--AGATGGGGTAAGGA-GCATA  1006