BAC Information

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BAC

Clone NameB6Ng01-094H03
Chromosome14 (Build37)
Map Location 121,055,767 - 121,056,557
singlet/doubletsinglet
Overlap genenone
Upstream geneHs6st3, LOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831, Mbnl2, Rap2a
Downstream geneLOC668835, LOC668837, Ranbp5, Farp1, LOC100043837, Stk24, Slc15a1, LOC100043577, Dock9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094H03.bB6Ng01-094H03.g
ACCDH905667DH905668
length1,250791
definitionDH905667|Mus musculus domesticus DNA, BAC clone: B6Ng01-094H03, 5' end.DH905668|Mus musculus domesticus DNA, BAC clone: B6Ng01-094H03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggtaagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttttgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatgttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatgatcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcctgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctaggg
cttttagatgtgttgtcaagctgctagtatgtgctgtctcccgtttcttc
tggaggcactcagagctatgagtttccctcttagaaatgctttcatgtgt
cccatagtttgggtacgttgtgctcatttcataaactctaaaagtcttaa
ttcttctttattcctccctgaccaagtatcattggagaagaggttattca
gtttcaacggaatgttggcttcatattgtgtattgagaaatagacttagg
catgggtctgaacggaacctggacaattcatttggatatcatgaaggccg
tttttgtacaaatatatgtcacatttggaaggatcgctagaaggtgctgg

gaattccaaagttctagaaacggctgctcacagggccatcctaataggaa
ggggtcagtttcctgatggggagggagtgtggggcaggatgaaataagta
ttccactaagcagacatttgcaatcttagaagaggggtgtaataaaggga
ttattagtaaggatggacatggaagattacctgctgagaactcccgtggg
tacccacatttcgtcttttgaccaagatctggctgcctttttcctggaca
gtctttttagagatgtctacaattcgatgaactatcgttaagtgaactat
cattaagggggtattcgtagttgctgagacagtctcttcatcaggagcaa
agtctgtttaggctccagtgtaaagacaacacctcccttgggcagtgctc
atgcagttttctgcccatcctagaatatctggatccccaagctcagactt
cctgtcctttctatagtctcagagtgtaaaagtgctgtcttgtccccttt
acacctctatagaaacccgggtctatgcagcaccttcagaacctcaggac
cttcagaagagcagtcagtgctcttacccactgagccatctcatgagtcc
ttggcctgatttcttaccttgatgagttggtggtccttaaatcccaaaac
gaggtcttaaaactcttagtctctcagcatttttctatgaaaatgcatgg
ggagggtttgggtggttccttcagagaggcagaggcagaggcagagaggc
agaggcagaagagagaggggagagaggggagaggggatagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_121055767_121056557
seq2: B6Ng01-094H03.g_67_857

seq1  GAATTCCAAAGTTCTAGAAACGGCTGCTCACAGGGCCATCCTAATAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGTTCTAGAAACGGCTGCTCACAGGGCCATCCTAATAGGAA  50

seq1  GGGGTCAGTTTCCTGATGGGGAGGGAGTGTGGGGCAGGATGAAATAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCAGTTTCCTGATGGGGAGGGAGTGTGGGGCAGGATGAAATAAGTA  100

seq1  TTCCACTAAGCAGACATTTGCAATCTTAGAAGAGGGGTGTAATAAAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTAAGCAGACATTTGCAATCTTAGAAGAGGGGTGTAATAAAGGGA  150

seq1  TTATTAGTAAGGATGGACATGGAAGATTACCTGCTGAGAACTCCCGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTAAGGATGGACATGGAAGATTACCTGCTGAGAACTCCCGTGGG  200

seq1  TACCCACATTTCGTCTTTTGACCAAGATCTGGCTGCCTTTTTCCTGGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACATTTCGTCTTTTGACCAAGATCTGGCTGCCTTTTTCCTGGACA  250

seq1  GTCTTTTTAGAGATGTCTACAATTCGATGAACTATCGTTAAGTGAACTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTTAGAGATGTCTACAATTCGATGAACTATCGTTAAGTGAACTAT  300

seq1  CATTAAGGGGGTATTCGTAGTTGCTGAGACAGTCTCTTCATCAGGAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGGGGGTATTCGTAGTTGCTGAGACAGTCTCTTCATCAGGAGCAA  350

seq1  AGTCTGTTTAGGCTCCAGTGTAAAGACAACACCTCCCTTGGGCAGTGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTTTAGGCTCCAGTGTAAAGACAACACCTCCCTTGGGCAGTGCTC  400

seq1  ATGCAGTTTTCTGCCCATCCTAGAATATCTGGATCCCCAAGCTCAGACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTTTTCTGCCCATCCTAGAATATCTGGATCCCCAAGCTCAGACTT  450

seq1  CCTGTCCTTTCTATAGTCTCAGAGTGTAAAAGTGCTGTCTTGTCCCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCTTTCTATAGTCTCAGAGTGTAAAAGTGCTGTCTTGTCCCCTTT  500

seq1  ACACCTCTATAGAAACCCGGGTCTATGCAGCACCTTCAGAACCTCAGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTCTATAGAAACCCGGGTCTATGCAGCACCTTCAGAACCTCAGGAC  550

seq1  CTTCAGAAGAGCAGTCAGTGCTCTTACCCACTGAGCCATCTCATGAGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAAGAGCAGTCAGTGCTCTTACCCACTGAGCCATCTCATGAGTCC  600

seq1  TTGGCCTGATTTCTTACCTTGATGAGTTGGTGGTCCTTAAATCCCAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTGATTTCTTACCTTGATGAGTTGGTGGTCCTTAAATCCCAAAAC  650

seq1  GAGGTCTTAAAACTCTTAGTCTCTCAGCATTTTTCTATGAAAATGCATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTTAAAACTCTTAGTCTCTCAGCATTTTTCTATGAAAATGCATGG  700

seq1  GGAGGGTTTGGGTGGTTCCTTCAGAGAGGCAGAGGCAGAGGCAGAGAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTTTGGGTGGTTCCTTCAGAGAGGCAGAGGCAGAGGCAGAGAGGC  750

seq1  AGAGGCAGAAGAGAGAGGGGAGAGAGGGGAGAGGGGATAGG  791
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGAAGAGAGAGGGGAGAGAGGGGAGAGGGGATAGG  791