BAC Information

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BAC

Clone NameB6Ng01-095A14
Chromosome14 (Build37)
Map Location 63,044,059 - 63,149,091
singlet/doubletdoublet
Overlap geneGucy1b2, LOC100042960, Ppia-ps14_723.1
Upstream geneKpna3, LOC100042933, EG432865, 6330409N04Rik, LOC100042941, Trim13, Kcnrg, LOC668253, Dleu7, Rnaseh2b
Downstream geneLOC545062, EG629059, E130113E03Rik, Ints6, LOC100042969, LOC668263, Wdfy2, LOC668268, EG432867, EG654465, EG654458, 2410125J01Rik, Defb42, LOC100042978, Ctsb, Fdft1, Neil2, Gata4, LOC100042988, LOC432868, Blk, LOC668293, BC065085, Tdh, Mtmr9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095A14.bB6Ng01-095A14.g
ACCDH906083DH906084
length9361,099
definitionDH906083|Mus musculus domesticus DNA, BAC clone: B6Ng01-095A14, 5' end.DH906084|Mus musculus domesticus DNA, BAC clone: B6Ng01-095A14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,148,401 - 63,149,091)(63,044,059 - 63,045,190)
sequence
gaattctttaaaaaaaaaaaggctcagaattattttctatttgattcttt
accaaacctcccttgaacttttgaccccacccccaccccagagagatagc
taagacttctctctaggtattttatattttatgccaaggtaacacaaaac
tgaaaggattttatactagtttaaggaaacagagaaggaatgtcccatcc
atccatccacccatccatccacccatccatccatccatccatccatccat
ccatccatctgtccaacagaagtttattagatacctactgtattcctgca
accattctaagttctgtatattagacagccgcgattctgcattatttttg
atgctctgaagacattctgcttacaagtctgctgaaagtttggaagactg
actacaaacagacagacaagctgtgcagcccgcgctcaggaggcttcaga
gaagaataaggactctatcaggaacaggattacaggtttattaatgctgt
attctggcaacgaatctggacacgtctgcccgtgttccaccaacgcctgt
gcttaacaaaggcagatggatctcttaattcttttgcaatgttaagaaaa
aaaatgtatgcttgctctctcttaagaagtaaagggctgaagtctaggga
tactgattcataagataataataataacaataacaataataataaagcaa
aacctggcgtaattgattggattggtatgtaaaataaaagactggacctg
tgttctgtaggagaggagctatccagagaattttgtagaataaaaagaga
gaactgctgggcgtggtggtgcacgcctttaatccttgcacttgggaggc
agaggcaggcagattctgaattagaggccagcctggtctacagagtgagt
tccaggacagccaggctatacagagaaaccctgtct
gaattcaggagccacctgctcactcctaagtgaactgaaatacgttctat
tcgggtcttttccaacccggggaagtatgcagacaggtgtgggactgtta
gtttctgttttctccgacccctccctgttgcatgaattcagctcattcaa
gctgagatggaacagctggcctatgcagtgtgcagcctggtgctctatgc
aggtgcatcctgtcacctgccaggaactgtgacttgctccctctccttct
ccctggggacctgctcctttgacttaaagctgaaaacctggggtagcaga
aacccacagtgttggctgttttggttctagcaattttgcctctgggtgct
tggcactgttgacaggacagggcatccatctgaggctaacttccttaaac
cacaacctgggctgtggtgagaagctgccatctgtgctggccttgagctg
cttctgggattcctagtgcagaatgcctgtctgagaggggacaaaggcct
cttttttaaatcaacagctgtcatacttttgtatacagtttcacctctgt
gaatttaggattctaagtgccctctgattcacaggagaccagagacagat
ggaaaatgggaagagagtgagccagaaacacatcagctttaaaatattat
ttgccagtgcaaacaaacaaacaaaaaaaatctctagtatctgaattttt
gcatccttgtctatgagaggcaaagttttaaaaagggaggtgcttatctg
tacaaattaaacaccagcagtataaaccggggacttttgagattagttac
ctaagagaccacagtgggaatggggtctagacaagagttgtgaagggtgg
ggagctggactctatggatagctccagagctgtgaatcaccttacagttt
catgtgtgtaaatagatagaggagaatgccgagaagaaacaaatgcaaat
atatcagatgtatctcagctattcagggactgagcagagacacagtcagg
atcagtggactcaatacaagctagtcacacaccctaggtactatagtgag
actatcccaaataaaaactagaagctagaataactcagtaaaagagcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_63148401_63149091
seq2: B6Ng01-095A14.b_46_736 (reverse)

seq1  TATTATTGTTATTGTTATTATTATTATCTTATGAATCAGTATCCCTAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTGTTATTGTTATTATTATTATCTTATGAATCAGTATCCCTAGAC  50

seq1  TTCAGCCCTTTACTTCTTAAGAGAGAGCAAGCATACATTTTTTTTCTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCCTTTACTTCTTAAGAGAGAGCAAGCATACATTTTTTTTCTTAA  100

seq1  CATTGCAAAAGAATTAAGAGATCCATCTGCCTTTGTTAAGCACAGGCGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCAAAAGAATTAAGAGATCCATCTGCCTTTGTTAAGCACAGGCGTT  150

seq1  GGTGGAACACGGGCAGACGTGTCCAGATTCGTTGCCAGAATACAGCATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAACACGGGCAGACGTGTCCAGATTCGTTGCCAGAATACAGCATTA  200

seq1  ATAAACCTGTAATCCTGTTCCTGATAGAGTCCTTATTCTTCTCTGAAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCTGTAATCCTGTTCCTGATAGAGTCCTTATTCTTCTCTGAAGCC  250

seq1  TCCTGAGCGCGGGCTGCACAGCTTGTCTGTCTGTTTGTAGTCAGTCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGCGCGGGCTGCACAGCTTGTCTGTCTGTTTGTAGTCAGTCTTCC  300

seq1  AAACTTTCAGCAGACTTGTAAGCAGAATGTCTTCAGAGCATCAAAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTCAGCAGACTTGTAAGCAGAATGTCTTCAGAGCATCAAAAATAA  350

seq1  TGCAGAATCGCGGCTGTCTAATATACAGAACTTAGAATGGTTGCAGGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAATCGCGGCTGTCTAATATACAGAACTTAGAATGGTTGCAGGAAT  400

seq1  ACAGTAGGTATCTAATAAACTTCTGTTGGACAGATGGATGGATGGATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGGTATCTAATAAACTTCTGTTGGACAGATGGATGGATGGATGGA  450

seq1  TGGATGGATGGATGGATGGGTGGATGGATGGGTGGATGGATGGATGGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGGATGGATGGATGGGTGGATGGATGGGTGGATGGATGGATGGGAC  500

seq1  ATTCCTTCTCTGTTTCCTTAAACTAGTATAAAATCCTTTCAGTTTTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTCTCTGTTTCCTTAAACTAGTATAAAATCCTTTCAGTTTTGTGT  550

seq1  TACCTTGGCATAAAATATAAAATACCTAGAGAGAAGTCTTAGCTATCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTGGCATAAAATATAAAATACCTAGAGAGAAGTCTTAGCTATCTCT  600

seq1  CTGGGGTGGGGGTGGGGTCAAAAGTTCAAGGGAGGTTTGGTAAAGAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTGGGGGTGGGGTCAAAAGTTCAAGGGAGGTTTGGTAAAGAATCA  650

seq1  AATAGAAAATAATTCTGAGCCTTTTTTTTTTTAAAGAATTC  691
      |||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAAATAATTCTGAGCCTTTTTTTTTTTAAAGAATTC  691

seq1: chr14_63044059_63045190
seq2: B6Ng01-095A14.g_68_1166

seq1  GAATTCAGGAGCCACCTGCTCACTCCTAAGTGAACTGAAATACGTTCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGCCACCTGCTCACTCCTAAGTGAACTGAAATACGTTCTAT  50

seq1  TCGGGTCTTTTCCAACCCGGGGAAGTATGCAGACAGGTGTGGGACTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGTCTTTTCCAACCCGGGGAAGTATGCAGACAGGTGTGGGACTGTTA  100

seq1  GTTTCTGTTTTCTCCGACCCCTCCCTGTTGCATGAATTCAGCTCATTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGTTTTCTCCGACCCCTCCCTGTTGCATGAATTCAGCTCATTCAA  150

seq1  GCTGAGATGGAACAGCTGGCCTATGCAGTGTGCAGCCTGGTGCTCTATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGATGGAACAGCTGGCCTATGCAGTGTGCAGCCTGGTGCTCTATGC  200

seq1  AGGTGCATCCTGTCACCTGCCAGGAACTGTGACTTGCTCCCTCTCCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCATCCTGTCACCTGCCAGGAACTGTGACTTGCTCCCTCTCCTTCT  250

seq1  CCCTGGGGACCTGCTCCTTTGACTTAAAGCTGAAAACCTGGGGTAGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGGACCTGCTCCTTTGACTTAAAGCTGAAAACCTGGGGTAGCAGA  300

seq1  AACCCACAGTGTTGGCTGTTTTGGTTCTAGCAATTTTGCCTCTGGGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACAGTGTTGGCTGTTTTGGTTCTAGCAATTTTGCCTCTGGGTGCT  350

seq1  TGGCACTGTTGACAGGACAGGGCATCCATCTGAGGCTAACTTCCTTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTGTTGACAGGACAGGGCATCCATCTGAGGCTAACTTCCTTAAAC  400

seq1  CACAACCTGGGCTGTGGTGAGAAGCTGCCATCTGTGCTGGCCTTGAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCTGGGCTGTGGTGAGAAGCTGCCATCTGTGCTGGCCTTGAGCTG  450

seq1  CTTCTGGGATTCCTAGTGCAGAATGCCTGTCTGAGAGGGGACAAAGGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGATTCCTAGTGCAGAATGCCTGTCTGAGAGGGGACAAAGGCCT  500

seq1  CTTTTTTAAATCAACAGCTGTCATACTTTTGTATACAGTTTCACCTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTAAATCAACAGCTGTCATACTTTTGTATACAGTTTCACCTCTGT  550

seq1  GAATTTAGGATTCTAAGTGCCCTCTGATTCACAGGAGACCAGAGACAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTAGGATTCTAAGTGCCCTCTGATTCACAGGAGACCAGAGACAGAT  600

seq1  GGAAAATGGGAAGAGAGTGAGCCAGAAACACATCAGCTTTAAAATATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATGGGAAGAGAGTGAGCCAGAAACACATCAGCTTTAAAATATTAT  650

seq1  TTGCCAGTGCAAACAAACAAACAAAAAAAATCTCTAGTATCTGAATTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGTGCAAACAAACAAACAAAAAAAATCTCTAGTATCTGAATTTTT  700

seq1  GCATCCTTGTCTATGAGAGGCAAAGTTTTAAAAAGGGAGGTGCTTATCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTTGTCTATGAGAGGCAAAGTTTTAAAAAGGGAGGTGCTTATCTG  750

seq1  TACAAATTAAACACCAGCAGTATAAACCGGGGACTTTTGAGATTAGTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATTAAACACCAGCAGTATAAACCGGGGACTTTTGAGATTAGTTAC  800

seq1  CTAAGAGACCACAGTGGGAATGGGGTCTAGACAAGAGTTGTGAAGGGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGACCACAGTGGGAATGGGGTCTAGACAAGAGTTGTGAAGGGTGG  850

seq1  GGAGCTGGACTCTATGGATAGCTCCAGAGCTGTGAATCACCTTACAGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGGACTCTATGGATAGCTCCAGAGCTGTGAATCACCTTACAGTTT  900

seq1  CATGTGTGTAAATAAGGATAGAGGAGAATGCCGAGAAAGAAAACAAATGC  950
      ||||||||||||||  |||||||||||||||||||||   ||||||||||
seq2  CATGTGTGTAAATA--GATAGAGGAGAATGCCGAGAA--GAAACAAATGC  946

seq1  AAATTAATATTCAGGATGTAATCTCAGCTATTCAGGGGACTGAGGCAGGA  1000
      ||||  ||| ||| ||||| |||||||||||||| |||||||| ||||  
seq2  AAAT--ATA-TCA-GATGT-ATCTCAGCTATTCA-GGGACTGA-GCAG--  987

seq1  GGACCACCAGTTCAGGGATCAAGTGGACTTCAAATACAAAGCTAGTTCAC  1050
       |||   ||| ||| ||||| ||||||||   ||||| ||||||| ||||
seq2  AGAC--ACAG-TCA-GGATC-AGTGGACT--CAATAC-AAGCTAG-TCAC  1028

seq1  AACCACCCTAGGTAACCTATAGTGAGACCTTATCACAAAATAAAAACTAG  1100
      |  |||||||||||  ||||||||||||  |||| | |||||||||||||
seq2  A--CACCCTAGGTA--CTATAGTGAGAC--TATC-CCAAATAAAAACTAG  1071

seq1  AGAGCTTAGGATATAACTCAGTAATAGAGCAT  1132
      | ||| |||   |||||||||||| |||||||
seq2  A-AGC-TAG--AATAACTCAGTAAAAGAGCAT  1099