BAC Information

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BAC

Clone NameB6Ng01-095C14
Chromosome14 (Build37)
Map Location 102,177,764 - 102,263,888
singlet/doubletdoublet
Overlap geneLmo7
Upstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3
Downstream geneLOC100043795, LOC545567, LOC669278
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095C14.bB6Ng01-095C14.g
ACCDH906177DH906178
length1,1101,124
definitionDH906177|Mus musculus domesticus DNA, BAC clone: B6Ng01-095C14, 5' end.DH906178|Mus musculus domesticus DNA, BAC clone: B6Ng01-095C14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,177,764 - 102,178,971)(102,262,551 - 102,263,888)
sequence
gaattcagtatgtagatgaagctggccttgaactcacaaacatcgccagc
ctcttcctccaagatgctgggatcaaaggcctgggtcaccacgcccaact
cagatactctttgtctttttgagaatccaaggcttctgtgttgcctgtag
tctttccaacttccagagggcctatgaagtctagaagcttctaattccat
gacttttgcttcaacttcagctacgttcttctgtgctctagttggctgta
gtcatatcctagagagtctttcccatcattaaatgattgcgttgtcccct
agcttgactcaacagcttcgtcttcacagtactcagctcctctctactgt
cttccttccgctccgtgccgtggtttgcccaagccaggagtcttcatgag
accattctcagatggatttttttgtcctcttacgtcactttgggaaatct
ccaagtgtttttgatattatttgtgtctttgtaggttattaattcaaaca
tttttttaatttattatttttgacactttattatgtgtatgtgatgtttt
ctgcactttcatcctgcatctcccccaccccccaacccttccctccaaca
atgcccctgacccttagtgaggggttgagcctcatgcacctctccttcat
gtatgctgaaatggtgatgggccagtcttgctcaggtctcctgcaggaaa
ccacagctgcagtgtgttcgggagggcagtggtcacatcgtttgtgtcca
gaaaccactgctttgtagcactcaccttcaacctctatcttcagttttgt
tttggggaacaaggctagcttagaagtcattgtccccagcttcccgagtg
cttggattacaggtaggtgcaaccatgcttggcttagactaggtcttgaa
tgatctcagaagcccgtgtgttaaagatgtgctcaccagagtcctgtgtt
tggagaggtcatggagtatgtttagagagtcatttggcatactgactctc
tttacgtcttgctcgtgactgtgaggagagtattgacatactatagctct
ctgttctgctgcacaccctaacaactggctcatggttatgaaagacatct
acatggagca
gaattctggcttttaatatgttccatgtgacacaaacctcatataatcaa
agtagcacatatcaaaccattcctataacatgttctgaacactctgtatt
tactcaataaattattcttccttgcctacaaccaagactttgcttgaaaa
tttggtatctagaccaagaagatgcctcggtaggtaagtgtgctttccat
gcaagactgatgacctgagtccagtgcctggactccatctaagaagcaga
atgctttgacatacatctgtaatgtctacacccctgctgtgcaacaggaa
acctagacagaagctagcctaaagcacacatcagagctgcagaacagagg
cccaagaactgacctctgaccccaaagaatatataagtatgaacctcccc
taaaagatctctagtcttcaggttttatgtagtaggttacttctgtcctc
cgtacctgctctttgtaagcttccctttagtgcttacaggaatgagcaaa
aactatactttccatgatttcatttgtgctaggggtaggtaaaacaacgt
aataatttgagaacaatgctggcttttcagcctcagaaatactatcatga
atctcataattctttgtgacacaggaaatatctggtgcagtgcacgatat
aaaagattactcttgcctctatcccttgggtaaaagttcttcacttctgg
atcatcagaaatgtgtccagataggatcaaaagttccctggggccaaagt
tatctgtggatttttgatttatagaattaaagaatttagctaatatctct
aatcaaaatcaacttattggggtaggggcagggcttccttgggactaaaa
tttactgaagcgtcaattaatgactgaaacttggaacaggatattacatg
catgagcgagacaaaaacagccaggatatacaccagagacttatgaaaac
atactgtcagatgagatgagcccagggctgagatgcacagtgtagatgct
ttgtattcttgcagagggactgggctcagtttccatgccacactgggccg
cctcctacatctatactcatctgagtcttaatgactcttctgctctgcag
ccctgcatgccacagctcaattac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_102177764_102178971
seq2: B6Ng01-095C14.b_52_1161

seq1  GAATTCAGTATGTAGATGAAGCTGGCCTTGAACTCACAAACATCGCCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATGTAGATGAAGCTGGCCTTGAACTCACAAACATCGCCAGC  50

seq1  CTCTTCCTCCAAGATGCTGGGATCAAAGGCCTGGGTCACCACGCCCAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTCCAAGATGCTGGGATCAAAGGCCTGGGTCACCACGCCCAACT  100

seq1  CAGATACTCTTTGTCTTTTTGAGAATCCAAGGCTTCTGTGTTGCCTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACTCTTTGTCTTTTTGAGAATCCAAGGCTTCTGTGTTGCCTGTAG  150

seq1  TCTTTCCAACTTCCAGAGGGCCTATGAAGTCTAGAAGCTTCTAATTCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCAACTTCCAGAGGGCCTATGAAGTCTAGAAGCTTCTAATTCCAT  200

seq1  GACTTTTGCTTCAACTTCAGCTACGTTCTTCTGTGCTCTAGTTGGCTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTGCTTCAACTTCAGCTACGTTCTTCTGTGCTCTAGTTGGCTGTA  250

seq1  GTCATATCCTAGAGAGTCTTTCCCATCATTAAATGATTGCGTTGTCCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATCCTAGAGAGTCTTTCCCATCATTAAATGATTGCGTTGTCCCCT  300

seq1  AGCTTGACTCAACAGCTTCGTCTTCACAGTACTCAGCTCCTCTCTACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGACTCAACAGCTTCGTCTTCACAGTACTCAGCTCCTCTCTACTGT  350

seq1  CTTCCTTCCGCTCCGTGCCGTGGTTTGCCCAAGCCAGGAGTCTTCATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCGCTCCGTGCCGTGGTTTGCCCAAGCCAGGAGTCTTCATGAG  400

seq1  ACCATTCTCAGATGGATTTTTTTGTCCTCTTACGTCACTTTGGGAAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTCTCAGATGGATTTTTTTGTCCTCTTACGTCACTTTGGGAAATCT  450

seq1  CCAAGTGTTTTTGATATTATTTGTGTCTTTGTAGGTTATTAATTCAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGTTTTTGATATTATTTGTGTCTTTGTAGGTTATTAATTCAAACA  500

seq1  TTTTTTTAATTTATTATTTTTGACACTTTATTATGTGTATGTGATGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAATTTATTATTTTTGACACTTTATTATGTGTATGTGATGTTTT  550

seq1  CTGCACTTTCATCCTGCATCTCCCCCACCCCCCAACCCTTCCCTCCAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTTTCATCCTGCATCTCCCCCACCCCCCAACCCTTCCCTCCAACA  600

seq1  ATGCCCCTGACCCTTAGTGAGGGGTTGAGCCTCATGCACCTCTCCTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCTGACCCTTAGTGAGGGGTTGAGCCTCATGCACCTCTCCTTCAT  650

seq1  GTATGCTGAAATGGTGATGGGCCAGTCTTGCTCAGGTCTCCTGCAGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCTGAAATGGTGATGGGCCAGTCTTGCTCAGGTCTCCTGCAGGAAA  700

seq1  CCACAGCTGCAGTGTGTTCGGGAGGGCAGTGGTCACATCGTTTGTGTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCTGCAGTGTGTTCGGGAGGGCAGTGGTCACATCGTTTGTGTCCA  750

seq1  GAAACCACTGCTTTGTAGCACTCACCTTCAACCTCTATCTTCAGTTTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCACTGCTTTGTAGCACTCACCTTCAACCTCTATCTTCAGTTTTGT  800

seq1  TTTGGGGAACAAGGCTAGCTTAGAAGTCATTGTCCCCAGCTTCCCGAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGAACAAGGCTAGCTTAGAAGTCATTGTCCCCAGCTTCCCGAGTG  850

seq1  CTTGGATTACAGGTAGGTGCAACCATGCTTGGCTTAGACTAGGTCTTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATTACAGGTAGGTGCAACCATGCTTGGCTTAGACTAGGTCTTGAA  900

seq1  TGATCTCAGAAGCCCGTGTGTTAAAGATGTGCTCACCAGAGTCCTGGTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGATCTCAGAAGCCCGTGTGTTAAAGATGTGCTCACCAGAGTCCT-GTGT  949

seq1  TTGGAGAGGTCATTGGAGGTATGTTTTAGAGAGTCATTTTGGCATACTGA  1000
      |||||||||||| |||| ||||| |||||||||||| |||||||||||||
seq2  TTGGAGAGGTCA-TGGA-GTATG-TTTAGAGAGTCA-TTTGGCATACTGA  995

seq1  CTCCTTCTTTTACGTTCTTTGCTTCGTGACTGTGAGGAGAGTAATTTGAC  1050
      |||  || |||||||   |||| ||||||||||||||||||||  |||||
seq2  CTC--TC-TTTACGT--CTTGC-TCGTGACTGTGAGGAGAGTA--TTGAC  1037

seq1  ATTACTATAGGCTCCTTCCTTGTTCTGCCTTGGCACACCCCAAACAACTG  1100
      | ||||||| ||||  ||  ||||||||    ||||| ||| ||||||| 
seq2  A-TACTATA-GCTC--TC--TGTTCTGC---TGCACA-CCCTAACAACT-  1076

seq1  GGGCTCATGGGTAATGGACAAGACCATCTACAAATGGAAGCCAAAGTGAG  1150
       ||||||| ||| |||   |||| |||||||  |||| |||         
seq2  -GGCTCAT-GGTTATG--AAAGA-CATCTAC--ATGG-AGCA--------  1110

seq1  CCTTCCCTCATTATACGTTAATCATCTATCGCTAGGATTTCACTATGGTG  1200
                                                        
seq2  --------------------------------------------------  1110

seq1  ATGGAGCA  1208
              
seq2  --------  1110

seq1: chr14_102262551_102263888
seq2: B6Ng01-095C14.g_68_1191 (reverse)

seq1  GTAATTGAGAAATGGAAGATCAGAGGTAAACTTCAATAAGGTTTCCAGTG  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTGAGTGCCTATCTCTTCTGACCTGTAATTCAGCTTTAGTGGGTAATATA  100
                                                        
seq2  --------------------------------------------------  0

seq1  TTTAGAAGTTGCTGTTGAAATCTAGGCACTAAACTGGATCTTACATCTAC  150
                                                        
seq2  --------------------------------------------------  0

seq1  CACCCTTGAGATTTTATTCTCATTTATATGTGTGTATGTGAGCCTGTGTG  200
                                       |||  |||| ||||| |
seq2  ---------------------------------GTAATTGAG-CTGTG-G  15

seq1  CATGCAGGTGCCTGCAGAAGCCAGAAGAAGTCATTAAGACCTCAGAATGA  250
      |||||||  | |||||||   |||||| ||||||||||| ||||| ||||
seq2  CATGCAG--GGCTGCAGA--GCAGAAG-AGTCATTAAGA-CTCAG-ATGA  58

seq1  AGTTATAGATGGTAGTGAGCGGCCCAGTGTGGGCATGGGAAACTGAGCCC  300
         ||||||| ||||   |||||||||||| ||||| |||||||||| ||
seq2  --GTATAGAT-GTAGGAGGCGGCCCAGTGT-GGCAT-GGAAACTGAG-CC  102

seq1  CAGTCCCTCTGCAAGAATACAAAGCATTCTTAACCACTGTGCCATCCCTT  350
      |||||||||||||||||||||||||| |||    ||||||| ||||   |
seq2  CAGTCCCTCTGCAAGAATACAAAGCA-TCT---ACACTGTG-CATC---T  144

seq1  CAGCCCTGGGCTCATCCTTCCATCTGACAGTATGTTTTCCATTAAGTCTT  400
      ||||||||||||||||    |||||||||||||||||||   |||||| |
seq2  CAGCCCTGGGCTCATC---TCATCTGACAGTATGTTTTC--ATAAGTC-T  188

seq1  CTGGTGTATATTCCTGGCTGTTTTTGTCTCGCTCATGCATGTAATATCCT  450
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTATA-TCCTGGCTGTTTTTGTCTCGCTCATGCATGTAATATCCT  237

seq1  GTTCCAAGTTTCAGTCATTAATTGACGCTTCAGTAAATTTTAGTCCCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAAGTTTCAGTCATTAATTGACGCTTCAGTAAATTTTAGTCCCAAG  287

seq1  GAAGCCCTGCCCCTACCCCAATAAGTTGATTTTTGATTAGAGATATTAGC  550
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAAGCCCTGCCCCTACCCCAATAAGTTGA-TTTTGATTAGAGATATTAGC  336

seq1  TAAATTCTTTAATTCTATAAATCAAAAATCCACAGATAACTTTGGCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCTTTAATTCTATAAATCAAAAATCCACAGATAACTTTGGCCCCA  386

seq1  GGGAACTTTTGATCCTATCTGGACACATTTCTGATGATCCAGAAGTGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACTTTTGATCCTATCTGGACACATTTCTGATGATCCAGAAGTGAAG  436

seq1  AACTTTTACCCAAGGGATAGAGGCAAGAGTAATCTTTTATATCGTGCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTACCCAAGGGATAGAGGCAAGAGTAATCTTTTATATCGTGCACT  486

seq1  GCACCAGATATTTCCTGTGTCACAAAGAATTATGAGATTCATGATAGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAGATATTTCCTGTGTCACAAAGAATTATGAGATTCATGATAGTAT  536

seq1  TTCTGAGGCTGAAAAGCCAGCATTGTTCTCAAATTATTACGTTGTTTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGGCTGAAAAGCCAGCATTGTTCTCAAATTATTACGTTGTTTTAC  586

seq1  CTACCCCTAGCACAAATGAAATCATGGAAAGTATAGTTTTTGCTCATTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCCTAGCACAAATGAAATCATGGAAAGTATAGTTTTTGCTCATTCC  636

seq1  TGTAAGCACTAAAGGGAAGCTTACAAAGAGCAGGTACGGAGGACAGAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCACTAAAGGGAAGCTTACAAAGAGCAGGTACGGAGGACAGAAGT  686

seq1  AACCTACTACATAAAACCTGAAGACTAGAGATCTTTTAGGGGAGGTTCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACTACATAAAACCTGAAGACTAGAGATCTTTTAGGGGAGGTTCAT  736

seq1  ACTTATATATTCTTTGGGGTCAGAGGTCAGTTCTTGGGCCTCTGTTCTGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATATATTCTTTGGGGTCAGAGGTCAGTTCTTGGGCCTCTGTTCTGC  786

seq1  AGCTCTGATGTGTGCTTTAGGCTAGCTTCTGTCTAGGTTTCCTGTTGCAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGATGTGTGCTTTAGGCTAGCTTCTGTCTAGGTTTCCTGTTGCAC  836

seq1  AGCAGGGGTGTAGACATTACAGATGTATGTCAAAGCATTCTGCTTCTTAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGGTGTAGACATTACAGATGTATGTCAAAGCATTCTGCTTCTTAG  886

seq1  ATGGAGTCCAGGCACTGGACTCAGGTCATCAGTCTTGCATGGAAAGCACA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGTCCAGGCACTGGACTCAGGTCATCAGTCTTGCATGGAAAGCACA  936

seq1  CTTACCTACCGAGGCATCTTCTTGGTCTAGATACCAAATTTTCAAGCAAA  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTACCGAGGCATCTTCTTGGTCTAGATACCAAATTTTCAAGCAAA  986

seq1  GTCTTGGTTGTAGGCAAGGAAGAATAATTTATTGAGTAAATACAGAGTGT  1250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGGTTGTAGGCAAGGAAGAATAATTTATTGAGTAAATACAGAGTGT  1036

seq1  TCAGAACATGTTATAGGAATGGTTTGATATGTGCTACTTTGATTATATGA  1300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACATGTTATAGGAATGGTTTGATATGTGCTACTTTGATTATATGA  1086

seq1  GGTTTGTGTCACATGGAACATATTAAAAGCCAGAATTC  1338
      ||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTGTCACATGGAACATATTAAAAGCCAGAATTC  1124