BAC Information

Click to search

BAC

Clone NameB6Ng01-095E19
Chromosome14 (Build37)
Map Location 99,067,206 - 99,187,212
singlet/doubletdoublet
Overlap geneLOC619716
Upstream geneDach1, LOC635593
Downstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095E19.bB6Ng01-095E19.g
ACCDH906279DH906280
length1,0441,007
definitionDH906279|Mus musculus domesticus DNA, BAC clone: B6Ng01-095E19, 5' end.DH906280|Mus musculus domesticus DNA, BAC clone: B6Ng01-095E19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,067,206 - 99,068,024)(99,186,111 - 99,187,212)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcctattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatctttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcactataccagtaccatgcagtttttatcacaattgc
cctgtagtaaagctttaggtcaggcaaaagccaaatcttaatagtgcatt
ctgtgtggttccagttcataaaattctaaaaaatgagaaactatgaaaat
tacagctgattagtatcccccagagtcttgggggggtgtggcttaagaaa
ttgttcactgggaaagtgacacacttgggaataataggtcaatttaggca
gtggttaaatctccataggactgtatgcataaaaggttcatattttgctc
taagtttattggatttgatagtctagctttaaatactgagcatgtccaac
actgaggatgcctagttatccacagagtctatcgctcaatgatacttatc
tgtcactcatgactgatgtcatctttatccaacatgctgtactgctagtc
taccatgctatctcttcttttgctatactactgttatcactcct
gaattcctgagtgagggtgcaggtatagtggtgagcacagctgtcttaca
gatgatctaggtgcactttgggaaagtaggactattgtaattatatttat
tcctaatttgtttacgattatacctgtgggtatatgagtgccttggaaga
catttctgcccacaaatcctataaatctatcaggtttcgtgctctccttg
ttgtgcaggccatttcattgagatgttctttggtttcatcaccttgactt
gttgtttgagtatacctccttgagatgtttgccttcacatctatttggct
tcctgaactttaattgtactatagagagtcttagtgaacagatttaagac
ttctgtaaagctgcatgtttagaaaacagagtaattgtgaaaattactta
gacacagaagtcagcttagttatgtggcaggtgcttctgaagagaaaaat
gaaatagagaaaagagaaaagacagaatcttttcatcaggaaacacacac
acacacacacaccaatcaaaacaaaccagcatctctaaaactcaagtctc
catggctcagtatctgttcacttaactgattattgaaaatacagctttgt
tttccaagtgtaaagaaggctgggaccattttggcatggaaatcattact
aaagtttcataaaaaatacacagcatttgctgcaccacttttaattaatt
attattattattttacacttggaaggtgaacagttttagtgaaaagtcga
tggtagatagaacatttggcatcaatacaagatttaaagaagcaggctcc
tattcattttgccaaaaagtgtttaggactgattccagctccttccttca
gccaaacacctatattttaaggtgtttcaatattttcagtagttcagaga
aagcatgaaatgtacttgatactactcgtttactgaaaaggttttatagt
ctcagatgtctctgtatgagagagagaaataggagaggagaaagggagga
ggaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99067206_99068024
seq2: B6Ng01-095E19.b_288_1086

seq1  CTGTTCTGTTCAGGAATCTTTCCCCTGTACCCATATCTTCAAGGCTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTGTTCAGGAATCTTTCCCCTGTACCCATATCTTCAAGGCTTTTC  50

seq1  CCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTC  100

seq1  CTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGA  150

seq1  TTCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTG  200

seq1  AAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGAT  250

seq1  CAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCC  300

seq1  ATTGGTCTACTTGTCTGTCACTATACCAGTACCATGCAGTTTTTATCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTCTACTTGTCTGTCACTATACCAGTACCATGCAGTTTTTATCACA  350

seq1  ATTGCCCTGTAGTAAAGCTTTAGGTCAGGCAAAAGCCAAATCTTAATAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCCTGTAGTAAAGCTTTAGGTCAGGCAAAAGCCAAATCTTAATAGT  400

seq1  GCATTCTGTGTGGTTCCAGTTCATAAAATTCTAAAAAATGAGAAACTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTGTGTGGTTCCAGTTCATAAAATTCTAAAAAATGAGAAACTATG  450

seq1  AAAATTACAGCTGATTAGTATCCCCCAGAGTCTTGGGGGGGTGTGGCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTACAGCTGATTAGTATCCCCCAGAGTCTTGGGGGGGTGTGGCTTA  500

seq1  AGAAATTGTTCACT-GGAAAGTGACACACTT-GGAATAATAGGTCAATTT  548
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  AGAAATTGTTCACTGGGAAAGTGACACACTTGGGAATAATAGGTCAATTT  550

seq1  AGGCAGTGGTTAAATCTCCATAGGACTGTATGCATAAAAGGTTCATA-TT  597
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGGCAGTGGTTAAATCTCCATAGGACTGTATGCATAAAAGGTTCATATTT  600

seq1  TGCTCTAAGTTTATTGGATTTGATAAGTCTAGCTTTAAATACTGAGCATG  647
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGCTCTAAGTTTATTGGATTTGAT-AGTCTAGCTTTAAATACTGAGCATG  649

seq1  TCCAACACTGAGGATGCCTAGTTATCCACAGAGTCTTATCGCTCAATGAT  697
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCCAACACTGAGGATGCCTAGTTATCCACAGAGTC-TATCGCTCAATGAT  698

seq1  ACTTTATCTTGTTCAACTTCAATGACTGAGTGTTCCATCTTTTATCCCAA  747
      || ||||| |||   |||   |||||||| |||  |||| ||||| ||||
seq2  AC-TTATC-TGT--CACT--CATGACTGA-TGT--CATC-TTTAT-CCAA  737

seq1  CATGCTGTACTGCCTAGTCTAACCAATGCTATCCTCTTCTTTTTTGCTAT  797
      |||||||||||| ||||||||  | ||||||| ||||||  |||||||| 
seq2  CATGCTGTACTG-CTAGTCTA--CCATGCTAT-CTCTTC--TTTTGCTA-  780

seq1  TACTACTGTTTAATTCACTCCT  819
      ||||||||||    ||||||||
seq2  TACTACTGTT---ATCACTCCT  799

seq1: chr14_99186111_99187212
seq2: B6Ng01-095E19.g_67_1073 (reverse)

seq1  TCCTTCCTCCCTCCCTTCTCTCCCTCTCCCTCTTCCCCTCCCCCTCCCTC  50
                                                        
seq2  --------------------------------------------------  0

seq1  TCCCTCTCCCTTTGCTCCTCACCTCCTTACTCCCTTCCCTCCTCCTCCC-  99
                                         ||| |||||||||| 
seq2  -----------------------------------TCCTTCCTCCTCCCT  15

seq1  -TCTCCTTCTTCCTATCTCTCTCTCTCATTACAGGAGACCATCTGAAGAC  148
       ||||||   |||||| ||||||||||| |||| |||| |||||| ||||
seq2  TTCTCCT--CTCCTATTTCTCTCTCTCA-TACA-GAGA-CATCTG-AGAC  59

seq1  TATAAAACCTTTTCAGTTAAACGAGGTAGGTTATCAAGGTAACAATTTCA  198
      |||||||||||||||| ||||||| ||||  |||||| |||   ||||||
seq2  TATAAAACCTTTTCAG-TAAACGA-GTAG--TATCAA-GTA--CATTTCA  102

seq1  TGCTTTCTCTGAACTACTGAAAATATTGAAACA-CTTAAAATATAGGTGT  247
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGCTTTCTCTGAACTACTGAAAATATTGAAACACCTTAAAATATAGGTGT  152

seq1  TTGGCTGAAGGAAGGAGCTGGAATCAGTCCTAAACACTTTTTGGCAAAAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGAAGGAAGGAGCTGGAATCAGTCCTAAACACTTTTTGGCAAAAT  202

seq1  GAATAGGAGCCTGCTTCTTTAAATCTTGTATTGATGCCAAATGTTCTATC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGAGCCTGCTTCTTTAAATCTTGTATTGATGCCAAATGTTCTATC  252

seq1  TACCATCGACTTTTCACTAAAACTGTTCACCTTCCAAGTGTAAAATAATA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCGACTTTTCACTAAAACTGTTCACCTTCCAAGTGTAAAATAATA  302

seq1  ATAATAATTAATTAAAAGTGGTGCAGCAAATGCTGTGTATTTTTTATGAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATTAATTAAAAGTGGTGCAGCAAATGCTGTGTATTTTTTATGAA  352

seq1  ACTTTAGTAATGATTTCCATGCCAAAATGGTCCCAGCCTTCTTTACACTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAGTAATGATTTCCATGCCAAAATGGTCCCAGCCTTCTTTACACTT  402

seq1  GGAAAACAAAGCTGTATTTTCAATAATCAGTTAAGTGAACAGATACTGAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACAAAGCTGTATTTTCAATAATCAGTTAAGTGAACAGATACTGAG  452

seq1  CCATGGAGACTTGAGTTTTAGAGATGCTGGTTTGTTTTGATTGGTGTGTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAGACTTGAGTTTTAGAGATGCTGGTTTGTTTTGATTGGTGTGTG  502

seq1  TGTGTGTGTGTGTTTCCTGATGAAAAGATTCTGTCTTTTCTCTTTTCTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTTTCCTGATGAAAAGATTCTGTCTTTTCTCTTTTCTCT  552

seq1  ATTTCATTTTTCTCTTCAGAAGCACCTGCCACATAACTAAGCTGACTTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTTTTCTCTTCAGAAGCACCTGCCACATAACTAAGCTGACTTCT  602

seq1  GTGTCTAAGTAATTTTCACAATTACTCTGTTTTCTAAACATGCAGCTTTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTAAGTAATTTTCACAATTACTCTGTTTTCTAAACATGCAGCTTTA  652

seq1  CAGAAGTCTTAAATCTGTTCACTAAGACTCTCTATAGTACAATTAAAGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTCTTAAATCTGTTCACTAAGACTCTCTATAGTACAATTAAAGTT  702

seq1  CAGGAAGCCAAATAGATGTGAAGGCAAACATCTCAAGGAGGTATACTCAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGCCAAATAGATGTGAAGGCAAACATCTCAAGGAGGTATACTCAA  752

seq1  ACAACAAGTCAAGGTGATGAAACCAAAGAACATCTCAATGAAATGGCCTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAGTCAAGGTGATGAAACCAAAGAACATCTCAATGAAATGGCCTG  802

seq1  CACAACAAGGAGAGCACGAAACCTGATAGATTTATAGGATTTGTGGGCAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACAAGGAGAGCACGAAACCTGATAGATTTATAGGATTTGTGGGCAG  852

seq1  AAATGTCTTCCAAGGCACTCATATACCCACAGGTATAATCGTAAACAAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCTTCCAAGGCACTCATATACCCACAGGTATAATCGTAAACAAAT  902

seq1  TAGGAATAAATATAATTACAATAGTCCTACTTTCCCAAAGTGCACCTAGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATAAATATAATTACAATAGTCCTACTTTCCCAAAGTGCACCTAGA  952

seq1  TCATCTGTAAGACAGCTGTGCTCACCACTATACCTGCACCCTCACTCAGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGTAAGACAGCTGTGCTCACCACTATACCTGCACCCTCACTCAGG  1002

seq1  AATTC  1102
      |||||
seq2  AATTC  1007