BAC Information

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BAC

Clone NameB6Ng01-095J12
Chromosome14 (Build37)
Map Location 26,643,560 - 26,896,199
singlet/doubletdoublet
Overlap geneAnxa11, Plac9, D14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192
Upstream geneLOC100039411, Zmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik
Downstream geneLOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527, LOC100039538, 4933413J09Rik, Slmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095J12.bB6Ng01-095J12.g
ACCDH906493DH906494
length729288
definitionDH906493|Mus musculus domesticus DNA, BAC clone: B6Ng01-095J12, 5' end.DH906494|Mus musculus domesticus DNA, BAC clone: B6Ng01-095J12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,643,560 - 26,644,288)(26,895,912 - 26,896,199)
sequence
gaattccaccagagcaaggattccaggaagctcctgaagcaagctgagag
cttgcagggagggagagcaaaggtgggagagagaaggggaagtgttttca
tgacaagaatttcaatccagggcaccctcaagcagacaagagaaacgtgc
cagggagagatgcccaaatcacaaaggagagacatctctttccataggat
gtcagacgctgcctgatgtatctatgtgactttcgtagcagtagcgggat
ctaggagccagagcaggtggctctgaggtgacacccaagtaagaggagag
gggcagagcatctgcacctgatgggcacccagggtgtatagcaggctcca
agagacgacctgatcccagctgagaggcagggagggaagaagccgttgga
gaggcagaccctaaaatctagagtggaaagtagtgggtggtagaaaccag
cagatgcaaatgagccacaccttaggagagtcaaattagcaacgtggttt
ggttaggagaggcagagtccatttatgtcctgtatgcctctcctcagtct
tggcacctgatggacaaactgatgtgggctgcagtcagggtgactgtttt
tattggagagtacgggggagagacatccaggggcatctggaagagtccag
gggagagattgaaagactgaagatgggcatcggactgcacctgatcaggg
tgggatggagggagaatagaggaagagtg
agctaactgtccactatcaaaaaccaatgtccttagctgaacagtagtgg
tgcacatatttaaatcccagcacttgggaggcagaggcagtcaaatctgt
gagtttgaagccaacctggtctgcaaagagagttccagaacaaccagagc
tatgtagagaaacccagtctcaaaaaaaaaaaaaaaggtggggggtgggg
tggggtgtcctcttccctgaattgataggatgtggatttgggaaggggac
ttgtgggacggaaaaccatgctaggaagtttggtaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_26643560_26644288
seq2: B6Ng01-095J12.b_49_777

seq1  GAATTCCACCAGAGCAAGGATTCCAGGAAGCTCCTGAAGCAAGCTGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCAGAGCAAGGATTCCAGGAAGCTCCTGAAGCAAGCTGAGAG  50

seq1  CTTGCAGGGAGGGAGAGCAAAGGTGGGAGAGAGAAGGGGAAGTGTTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGGGAGGGAGAGCAAAGGTGGGAGAGAGAAGGGGAAGTGTTTTCA  100

seq1  TGACAAGAATTTCAATCCAGGGCACCCTCAAGCAGACAAGAGAAACGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGAATTTCAATCCAGGGCACCCTCAAGCAGACAAGAGAAACGTGC  150

seq1  CAGGGAGAGATGCCCAAATCACAAAGGAGAGACATCTCTTTCCATAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGAGATGCCCAAATCACAAAGGAGAGACATCTCTTTCCATAGGAT  200

seq1  GTCAGACGCTGCCTGATGTATCTATGTGACTTTCGTAGCAGTAGCGGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACGCTGCCTGATGTATCTATGTGACTTTCGTAGCAGTAGCGGGAT  250

seq1  CTAGGAGCCAGAGCAGGTGGCTCTGAGGTGACACCCAAGTAAGAGGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGCCAGAGCAGGTGGCTCTGAGGTGACACCCAAGTAAGAGGAGAG  300

seq1  GGGCAGAGCATCTGCACCTGATGGGCACCCAGGGTGTATAGCAGGCTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAGCATCTGCACCTGATGGGCACCCAGGGTGTATAGCAGGCTCCA  350

seq1  AGAGACGACCTGATCCCAGCTGAGAGGCAGGGAGGGAAGAAGCCGTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACGACCTGATCCCAGCTGAGAGGCAGGGAGGGAAGAAGCCGTTGGA  400

seq1  GAGGCAGACCCTAAAATCTAGAGTGGAAAGTAGTGGGTGGTAGAAACCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGACCCTAAAATCTAGAGTGGAAAGTAGTGGGTGGTAGAAACCAG  450

seq1  CAGATGCAAATGAGCCACACCTTAGGAGAGTCAAATTAGCAACGTGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCAAATGAGCCACACCTTAGGAGAGTCAAATTAGCAACGTGGTTT  500

seq1  GGTTAGGAGAGGCAGAGTCCATTTATGTCCTGTATGCCTCTCCTCAGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGGAGAGGCAGAGTCCATTTATGTCCTGTATGCCTCTCCTCAGTCT  550

seq1  TGGCACCTGATGGACAAACTGATGTGGGCTGCAGTCAGGGTGACTGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCTGATGGACAAACTGATGTGGGCTGCAGTCAGGGTGACTGTTTT  600

seq1  TATTGGAGAGTACGGGGGAGAGACATCCAGGGGCATCTGGAAGAGTCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGAGAGTACGGGGGAGAGACATCCAGGGGCATCTGGAAGAGTCCAG  650

seq1  GGGAGAGATTGAAAGACTGAAGATGGGCATCGGACTGCACCTGATCAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGATTGAAAGACTGAAGATGGGCATCGGACTGCACCTGATCAGGG  700

seq1  TGGGATGGAGGGAGAATAGAGGAAGAGTG  729
      |||||||||||||||||||||||||||||
seq2  TGGGATGGAGGGAGAATAGAGGAAGAGTG  729

seq1: chr14_26895912_26896199
seq2: B6Ng01-095J12.g_74_361 (reverse)

seq1  CCTTACCAAACTTCCTAGCATGGTTTTCCGTCCCACAAGTCCCCTTCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACCAAACTTCCTAGCATGGTTTTCCGTCCCACAAGTCCCCTTCCCA  50

seq1  AATCCACATCCTATCAATTCAGGGAAGAGGACACCCCACCCCACCCCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCACATCCTATCAATTCAGGGAAGAGGACACCCCACCCCACCCCCCA  100

seq1  CCTTTTTTTTTTTTTTTGAGACTGGGTTTCTCTACATAGCTCTGGTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTTTTTTTTTTTGAGACTGGGTTTCTCTACATAGCTCTGGTTGTT  150

seq1  CTGGAACTCTCTTTGCAGACCAGGTTGGCTTCAAACTCACAGATTTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTCTCTTTGCAGACCAGGTTGGCTTCAAACTCACAGATTTGACT  200

seq1  GCCTCTGCCTCCCAAGTGCTGGGATTTAAATATGTGCACCACTACTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGCCTCCCAAGTGCTGGGATTTAAATATGTGCACCACTACTGTTC  250

seq1  AGCTAAGGACATTGGTTTTTGATAGTGGACAGTTAGCT  288
      ||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGGACATTGGTTTTTGATAGTGGACAGTTAGCT  288