BAC Information

Click to search

BAC

Clone NameB6Ng01-095K09
Chromosome14 (Build37)
Map Location 75,813,231 - 75,908,872
singlet/doubletdoublet
Overlap geneGm912
Upstream geneHtr2a, LOC668508, Esd, Lrch1, ENSMUSG00000075519, LOC100043169, 5031414D18Rik, 4921509B22Rik, LOC100043176, Lcp1, Cpb2, Zc3h13
Downstream geneSpert, 4930564B18Rik, Cog3, Slc25a30, LOC100043189, Tpt1, LOC100038852, Gtf2f2, LOC668504, Kctd4, 1200011I18Rik, Nufip1, LOC100043752, 2900040C04Rik, Tsc22d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095K09.bB6Ng01-095K09.g
ACCDH906530DH906531
length1,1521,112
definitionDH906530|Mus musculus domesticus DNA, BAC clone: B6Ng01-095K09, 5' end.DH906531|Mus musculus domesticus DNA, BAC clone: B6Ng01-095K09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,907,690 - 75,908,872)(75,813,231 - 75,814,328)
sequence
gaattccagaaaaagttcatttggaaatgctaagagattgtgatcaattc
cagagagccaccaagtgctgagggctttgaataccaaagctcagagtctt
aacactaggaagagactgaagattaaaaaaaaaagcatcaaaggacagaa
tttacaggagatacagctatgaaggccaggagaagtctcaaggaagcaag
agatggcagagccattgaaacaactgaagattaaagggtgtgaggattct
gaggagcgaaggctaagagaggtgctcaggagagctaccatggtttaaga
agccatgggtccctatgcctaaatcttggaaactgtattgctagtccctg
ggtgttggtactctaaggccagaacaataaacctctgccttgagcgcccg
gaactataaggcttagaagacttggagccacagcttctaactctaaggct
taatgctatacgcctctggatatgcgtcttctgcttgagagtctctggaa
ctcagggctgtcagcactagggcagcttcccctttgactcgctctgaatt
ctttctttctgaacaaacaaagctacagcgactgtttatgatagcttgaa
cctgctgtcttcacctgtctccttcatagacaaaatcaaaattcagccca
cctctgacctggtgggtttctcccaggcgatggctgtagtgatcctggca
tatgtagggctctgggaggaggggggcactggaacctggggtatttattt
agtcgcttgtgtccttattcctgggcgtgtcttcactctgttgctttgta
gggtcggagttcaggaaactgaacagtcctagctggacgacgccggactt
taaagctcagccagcgcacttcagtgatggacggttcactaggatataac
attagacctgactaagcctatctcctcgtttgtctccagatatcccaccc
tggatgaactcatgctgcagcacacattcttaaaggcttcttaaagaccc
aacagcaaacgaggaaaaacaggctctctcaactctgggtctgatcggat
tctgatttctactagtatcactcttgctggataatgtaaactggaggtgg
atgcaccatcagaagccttggtggtctacccctgctggatgtgctcaaag
gc
gaattcagcatagcgacacactattggcttattcaaacattaacagaaag
ggcatcaggactttgttcttgtgggctgggggcttatctttgctcacata
gcaaccagttgatgtatgactttacccagcgtcaaggggcaatagacaga
ggggaggttctggccagatggtgttgactcagataatatagccctgctgg
tccttgcataccttttcatctctacagtcaagatgttcttaggaatgcct
taacaacagctctgccctggcatgcctgggggctgttctgctttgttctc
agtcccaagccggggccgtgggctcctaaactcacaagttacaatatttt
atcttccttcaatgcaaggagggacccatgggaagggcgctccttgatgc
ttctggaaggagctgaccatactgagactaggactttagacctctagact
tgagagttattttacttttatatttctctgacccttccagtgcatggttt
ctttacggcaatcccaggaaactggagcatccagctggctgcctgtctga
gtgtttccggagcagggagcctcctcagctaaggctgaattgttcttgct
ttgggatcaggttgtaatgattggacaaaacagacgaaggaggctgatgg
acttttctagaatcctcttctcaggagaagcaagggcaaaggcccaaccc
ctaccttgccacccgcagcagcccaaggagttctgctattcctctgggac
cttgactctggtgagtctggactcttccataaagaatggaacttcagaac
gagccggtttttgatcagaggtaggatttattttaaaatagaaatgaaag
ttcccctggagttgtgctaagcaatacttctgtgctgagaagtttcaagt
ttcctagctgttgctaaattttgctctcagttacattctctaagagctga
taaaaatgtttttatttctcacatccacgcagcattctgcttgtatatta
gccaaaactaagatacccaagatataagatacatttctaaacacatgaaa
ctcaagaaatatgaagactgaaatgtgacctatgccctcttaaaagtgga
acaaaacccttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_75907690_75908872
seq2: B6Ng01-095K09.b_49_1200 (reverse)

seq1  GCCTCTGAGCTACATCCAGGCCAGAGTGTAGA-CACCATGTCTTCTGATG  49
      |||| ||||| ||||||||  ||| | ||||| ||||| | |||||||||
seq2  GCCTTTGAGC-ACATCCAG--CAG-GGGTAGACCACCAAGGCTTCTGATG  46

seq1  GTTGCAT-CACCTCCAGTTTCACA-TATCCAGGCAAGAGTGAAATACTAA  97
      | ||||| |||||||||||| ||| |||||| |||||||||  |||||| 
seq2  G-TGCATCCACCTCCAGTTT-ACATTATCCA-GCAAGAGTG--ATACTA-  90

seq1  GGTAAGAAATCAGAATTCTGATCAGAAACCCCAGGAAGGTTGGAGAAGGA  147
       || ||||||||||| || |||||||   |||||  ||  | ||||  ||
seq2  -GT-AGAAATCAGAA-TCCGATCAGA---CCCAG--AG--TTGAGA--GA  128

seq1  GCCCTTGTTTTTCCCTCCGTTTTGCTGTTGGGGTCTTTAAGAAGCCTTTA  197
      |||  ||||||| ||||   ||||||||| ||||||||||||||||||||
seq2  GCC--TGTTTTT-CCTC--GTTTGCTGTT-GGGTCTTTAAGAAGCCTTTA  172

seq1  AGGAATGTGTGCTTGCAAGCATGAGTTCATCCAGGGTGGGATATCTGGAG  247
      | |||||||||| ||| |||||||||||||||||||||||||||||||||
seq2  A-GAATGTGTGC-TGC-AGCATGAGTTCATCCAGGGTGGGATATCTGGAG  219

seq1  ACAAACGAGGAGATAGGCTTAGTCAGGTCTAATGTTATATCCTAGTGAAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACGAGGAGATAGGCTTAGTCAGGTCTAATGTTATATCCTAGTGAAC  269

seq1  CGTCCATCACCTGAAGTGCGCTGGCTGAGCTTTAAAGTCCGGCGTCGTCC  347
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCATCA-CTGAAGTGCGCTGGCTGAGCTTTAAAGTCCGGCGTCGTCC  318

seq1  AGCTAGGACTGCTTCAGTTTCCCTGAACTCCGACCCTACAAAGCAACAGA  397
      ||||||||||| |||||||| |||||||||||||||||||||||||||||
seq2  AGCTAGGACTG-TTCAGTTT-CCTGAACTCCGACCCTACAAAGCAACAGA  366

seq1  GTGAAGACACGCCCAGGAATAAGGACACAAGCGACTAAATAAATACCCCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGACACGCCCAGGAATAAGGACACAAGCGACTAAATAAATACCCCA  416

seq1  GGTTCCAGTGCCCCCCTCCTCCCAGAGCCCTACATATGCCAGGATCACTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCAGTGCCCCCCTCCTCCCAGAGCCCTACATATGCCAGGATCACTA  466

seq1  CAGCCATCGCCTGGGAGAAACCCACCAGGTCAGAGGTGGGCTGAATTTTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATCGCCTGGGAGAAACCCACCAGGTCAGAGGTGGGCTGAATTTTG  516

seq1  ATTTTGTCTATGAAGGAGACAGGTGAAGACAGCAGGTTCAAGCTATCATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTCTATGAAGGAGACAGGTGAAGACAGCAGGTTCAAGCTATCATA  566

seq1  AACAGTCGCTGTAGCTTTGTTTGTTCAGAAAGAAAGAATTCAGAGCGAGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCGCTGTAGCTTTGTTTGTTCAGAAAGAAAGAATTCAGAGCGAGT  616

seq1  CAAAGGGGAAGCTGCCCTAGTGCTGACAGCCCTGAGTTCCAGAGACTCTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGGAAGCTGCCCTAGTGCTGACAGCCCTGAGTTCCAGAGACTCTC  666

seq1  AAGCAGAAGACGCATATCCAGAGGCGTATAGCATTAAGCCTTAGAGTTAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAAGACGCATATCCAGAGGCGTATAGCATTAAGCCTTAGAGTTAG  716

seq1  AAGCTGTGGCTCCAAGTCTTCTAAGCCTTATAGTTCCGGGCGCTCAAGGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTGGCTCCAAGTCTTCTAAGCCTTATAGTTCCGGGCGCTCAAGGC  766

seq1  AGAGGTTTATTGTTCTGGCCTTAGAGTACCAACACCCAGGGACTAGCAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTTATTGTTCTGGCCTTAGAGTACCAACACCCAGGGACTAGCAAT  816

seq1  ACAGTTTCCAAGATTTAGGCATAGGGACCCATGGCTTCTTAAACCATGGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTTCCAAGATTTAGGCATAGGGACCCATGGCTTCTTAAACCATGGT  866

seq1  AGCTCTCCTGAGCACCTCTCTTAGCCTTCGCTCCTCAGAATCCTCACACC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCCTGAGCACCTCTCTTAGCCTTCGCTCCTCAGAATCCTCACACC  916

seq1  CTTTAATCTTCAGTTGTTTCAATGGCTCTGCCATCTCTTGCTTCCTTGAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCTTCAGTTGTTTCAATGGCTCTGCCATCTCTTGCTTCCTTGAG  966

seq1  ACTTCTCCTGGCCTTCATAGCTGTATCTCCTGTAAATTCTGTCCTTTGAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCCTGGCCTTCATAGCTGTATCTCCTGTAAATTCTGTCCTTTGAT  1016

seq1  GCTTTTTTTTTTAATCTTCAGTCTCTTCCTAGTGTTAAGACTCTGAGCTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTTTTTTAATCTTCAGTCTCTTCCTAGTGTTAAGACTCTGAGCTT  1066

seq1  TGGTATTCAAAGCCCTCAGCACTTGGTGGCTCTCTGGAATTGATCACAAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTCAAAGCCCTCAGCACTTGGTGGCTCTCTGGAATTGATCACAAT  1116

seq1  CTCTTAGCATTTCCAAATGAACTTTTTCTGGAATTC  1183
      ||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGCATTTCCAAATGAACTTTTTCTGGAATTC  1152

seq1: chr14_75813231_75814328
seq2: B6Ng01-095K09.g_91_1179

seq1  TTGGCTTATTCAAACATTAACAGAAAGGGCATCAGGACTTTGTTCTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTATTCAAACATTAACAGAAAGGGCATCAGGACTTTGTTCTTGTG  50

seq1  GGCTGGGGGCTTATCTTTGCTCACATAGCAACCAGTTGATGTATGACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGGGCTTATCTTTGCTCACATAGCAACCAGTTGATGTATGACTTT  100

seq1  ACCCAGCGTCAAGGGGCAATAGACAGAGGGGAGGTTCTGGCCAGATGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCGTCAAGGGGCAATAGACAGAGGGGAGGTTCTGGCCAGATGGTG  150

seq1  TTGACTCAGATAATATAGCCCTGCTGGTCCTTGCATACCTTTTCATCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCAGATAATATAGCCCTGCTGGTCCTTGCATACCTTTTCATCTCT  200

seq1  ACAGTCAAGATGTTCTTAGGAATGCCTTAACAACAGCTCTGCCCTGGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAAGATGTTCTTAGGAATGCCTTAACAACAGCTCTGCCCTGGCAT  250

seq1  GCCTGGGGGCTGTTCTGCTTTGTTCTCAGTCCCAAGCCGGGGCCGTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGGGCTGTTCTGCTTTGTTCTCAGTCCCAAGCCGGGGCCGTGGGC  300

seq1  TCCTAAACTCACAAGTTACAATATTTTATCTTCCTTCAATGCAAGGAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAACTCACAAGTTACAATATTTTATCTTCCTTCAATGCAAGGAGGG  350

seq1  ACCCATGGGAAGGGCGCTCCTTGATGCTTCTGGAAGGAGCTGACCATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGGGAAGGGCGCTCCTTGATGCTTCTGGAAGGAGCTGACCATACT  400

seq1  GAGACTAGGACTTTAGACCTCTAGACTTGAGAGTTATTTTACTTTTATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTAGGACTTTAGACCTCTAGACTTGAGAGTTATTTTACTTTTATAT  450

seq1  TTCTCTGACCCTTCCAGTGCATGGTTTCTTTACGGCAATCCCAGGAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGACCCTTCCAGTGCATGGTTTCTTTACGGCAATCCCAGGAAACT  500

seq1  GGAGCATCCAGCTGGCTGCCTGTCTGAGTGTTTCCGGAGCAGGGAGCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATCCAGCTGGCTGCCTGTCTGAGTGTTTCCGGAGCAGGGAGCCTC  550

seq1  CTCAGCTAAGGCTGAATTGTTCTTGCTTTGGGATCAGGTTGTAATGATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTAAGGCTGAATTGTTCTTGCTTTGGGATCAGGTTGTAATGATTG  600

seq1  GACAAAACAGACGAAGGAGGCTGATGGACTTTTCTAGAATCCTCTTCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAACAGACGAAGGAGGCTGATGGACTTTTCTAGAATCCTCTTCTCA  650

seq1  GGAGAAGCAAGGGCAAAGGCCCAACCCCTACCTTGCCACCCGCAGCAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGCAAGGGCAAAGGCCCAACCCCTACCTTGCCACCCGCAGCAGCC  700

seq1  CAAGGAGTTCTGCTATTCCTCTGGGACCTTGACTCTGGTGAGTCTGGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGTTCTGCTATTCCTCTGGGACCTTGACTCTGGTGAGTCTGGACT  750

seq1  CTTCCATAAAGAATGGAACTTCAGAACGAGCCGG-TGTTGATCAGAGGTA  799
      |||||||||||||||||||||||||||||||||| | |||||||||||||
seq2  CTTCCATAAAGAATGGAACTTCAGAACGAGCCGGTTTTTGATCAGAGGTA  800

seq1  GGATTTA-TTTAAAATAGAAATGAAGGTTCCCCTGGGAGTGTGGCTAAGC  848
      ||||||| ||||||||||||||||| |||||||| |||||   |||||||
seq2  GGATTTATTTTAAAATAGAAATGAAAGTTCCCCT-GGAGTTGTGCTAAGC  849

seq1  AATACTTCTGTGCTGAG-AGTTTCAAGTATCCTAGCTGTTGCTAAATTGT  897
      ||||||||||||||||| |||||||||| ||||||||||||||||||| |
seq2  AATACTTCTGTGCTGAGAAGTTTCAAGTTTCCTAGCTGTTGCTAAATT-T  898

seq1  GGCTCTCAGTTACA-TCTCTTAGAGCTGATAAAGATGTTTTTATTTCTCC  946
       ||||||||||||| ||||| |||||||||||| |||||||||||||| |
seq2  TGCTCTCAGTTACATTCTCTAAGAGCTGATAAAAATGTTTTTATTTCT-C  947

seq1  ACATCCACGCCAGCA-TCTGC-TGTATATTAGCCCAAAACCTAGGATACC  994
      ||||||||| ||||| ||||| ||||||||||||  ||| ||| ||||||
seq2  ACATCCACG-CAGCATTCTGCTTGTATATTAGCC--AAAACTAAGATACC  994

seq1  CAAGATATAAGATACAATTTCCTAAACACATGAAACTCAAGAAAAATGAA  1044
      ||||||||||||||||  || ||||||||||||||||||||||| |||||
seq2  CAAGATATAAGATACA--TTTCTAAACACATGAAACTCAAGAAATATGAA  1042

seq1  GACTGAAATGTGGACACTATGCCCCTCCTTAGAAGTGGGAACAAAACACC  1094
      ||||||||||| ||| ||||||||   |||| |||| ||||||||  |||
seq2  GACTGAAATGT-GAC-CTATGCCC--TCTTAAAAGT-GGAACAAA--ACC  1085

seq1  CTTG  1098
      ||||
seq2  CTTG  1089