BAC Information

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BAC

Clone NameB6Ng01-095O08
Chromosome14 (Build37)
Map Location 28,918,401 - 29,108,574
singlet/doubletdoublet
Overlap geneErc2
Upstream geneIl17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370
Downstream geneLOC100040206, Wnt5a, LOC100040218, Cacna2d3, Lrtm1, Ppia-ps15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095O08.bB6Ng01-095O08.g
ACCDH906709DH906710
length469516
definitionDH906709|Mus musculus domesticus DNA, BAC clone: B6Ng01-095O08, 5' end.DH906710|Mus musculus domesticus DNA, BAC clone: B6Ng01-095O08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,108,101 - 29,108,574)(28,918,401 - 28,918,922)
sequence
ctaacatcctgagagctggtccctgcagtggtgtgtgggggagggggagg
ccctagaagtttccaccatcaagctaccaagctgagcgcaggtctgtcga
attaagtagtgggcagcacatgctatacttagcttttaaacacttgtaaa
gtcctcttcattcatttatcttacttgtcactgacaagctcctcaaggac
tgtaacagtatgcagagcatgaagagcctgggtaaacaacacatatttta
tgtggaatctaaactgtttcaaccccgagagtcaatagagggtctcagaa
aaagccgggactcttctactcaactgcgaggggttctgggcatggtctgt
tccgagcttctctacaaagcagactgtgagatcaaatatcattaaaaaaa
ttagttggaaagaaaggaggacaggaggagggagagaaagggatggaagg
aagacgaaaaagcaagagt
cctgcagggcttagatgtgagggttccacccctgctgtcaggcaggctgc
tgggcttgaagtctggtctcctctcctcagtctctgctctgtcacatctc
agtatgacctgatgctgactgtcctttctctgtcactgctcctcagtgtg
gaagcagagataaccccatctggaagagaggaagatgaagtggggctata
ctaggaagagatttggggaagatgctagcaagtaccaagcactggataaa
tgctgctgcttctactgccttggtcctcactgcaccgcatccctcttcct
gtctgcttttctttaggcagcctcatgttcagatgtcattttgtggctag
aagtaggcaagaagcactgatgtgtgaaagcagatctctaggagtggaat
gataccaactgggcatggatatgaagcaggatgctgtgtgaaatatgctg
ttcttctcagtggggtctatcctgagatgcctagggagctagtgcgcttg
tgtgtgtgtttgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_29108101_29108574
seq2: B6Ng01-095O08.b_48_521 (reverse)

seq1  CTCTTACTTTTTCGTCTTCCTTCCATCCCTTTCTCTCCCTCCTCCTGTCC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCTTTTTCGTCTTCCTTCCATCCCTTTCTCTCCCTCCTCCTGTCC  50

seq1  TCCTTTCTTTCCAACTAATTTTTTTAATGATATTTGATCTCACAGTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTTTCCAACTAATTTTTTTAATGATATTTGATCTCACAGTCTGC  100

seq1  TTTGTAGAGAAGCTCGGAACAGACCATGCCCAGAACCCCTCGCAGTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGAGAAGCTCGGAACAGACCATGCCCAGAACCCCTCGCAGTTGAG  150

seq1  TAGAAGAGTCCCGGCTTTTTCTGAGACCCTCTATTGACTCTCGGGGTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAGTCCCGGCTTTTTCTGAGACCCTCTATTGACTCTCGGGGTTGA  200

seq1  AACAGTTTAGATTCCACATAAAATATGTGTTGTTTACCCAGGCTCTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTAGATTCCACATAAAATATGTGTTGTTTACCCAGGCTCTTCAT  250

seq1  GCTCTGCATACTGTTACAGTCCTTGAGGAGCTTGTCAGTGACAAGTAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGCATACTGTTACAGTCCTTGAGGAGCTTGTCAGTGACAAGTAAGA  300

seq1  TAAATGAATGAAGAGGACTTTACAAGTGTTTAAAAGCTAAGTATAGCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAATGAAGAGGACTTTACAAGTGTTTAAAAGCTAAGTATAGCATG  350

seq1  TGCTGCCCACTACTTAATTCGACAGACCTGCGCTCAGCTTGGTAGCTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCCACTACTTAATTCGACAGACCTGCGCTCAGCTTGGTAGCTTGA  400

seq1  TGGTGGAAACTTCTAGGGCCTCCCCCTCCCCCACACACCACTGCAGGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGAAACTTCTAGGGCCTCCCCCTCCCCCACACACCACTGCAGGGAC  450

seq1  CAGCTCTCAGGATGTTAGGAATTC  474
      ||||||||||||||||||||||||
seq2  CAGCTCTCAGGATGTTAGGAATTC  474

seq1: chr14_28918401_28918922
seq2: B6Ng01-095O08.g_70_591

seq1  GAATTCCCTGCAGGGCTTAGATGTGAGGGTTCCACCCCTGCTGTCAGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGCAGGGCTTAGATGTGAGGGTTCCACCCCTGCTGTCAGGCA  50

seq1  GGCTGCTGGGCTTGAAGTCTGGTCTCCTCTCCTCAGTCTCTGCTCTGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTGGGCTTGAAGTCTGGTCTCCTCTCCTCAGTCTCTGCTCTGTCA  100

seq1  CATCTCAGTATGACCTGATGCTGACTGTCCTTTCTCTGTCACTGCTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAGTATGACCTGATGCTGACTGTCCTTTCTCTGTCACTGCTCCTC  150

seq1  AGTGTGGAAGCAGAGATAACCCCATCTGGAAGAGAGGAAGATGAAGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGAAGCAGAGATAACCCCATCTGGAAGAGAGGAAGATGAAGTGGG  200

seq1  GCTATACTAGGAAGAGATTTGGGGAAGATGCTAGCAAGTACCAAGCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATACTAGGAAGAGATTTGGGGAAGATGCTAGCAAGTACCAAGCACTG  250

seq1  GATAAATGCTGCTGCTTCTACTGCCTTGGTCCTCACTGCACCGCATCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATGCTGCTGCTTCTACTGCCTTGGTCCTCACTGCACCGCATCCCT  300

seq1  CTTCCTGTCTGCTTTTCTTTAGGCAGCCTCATGTTCAGATGTCATTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGTCTGCTTTTCTTTAGGCAGCCTCATGTTCAGATGTCATTTTGT  350

seq1  GGCTAGAAGTAGGCAAGAAGCACTGATGTGTGAAAGCAGATCTCTAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGAAGTAGGCAAGAAGCACTGATGTGTGAAAGCAGATCTCTAGGAG  400

seq1  TGGAATGATACCAACTGGGCATGGATATGAAGCAGGATGCTGTGTGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGATACCAACTGGGCATGGATATGAAGCAGGATGCTGTGTGAAAT  450

seq1  ATGCTGTTCTTCTCAGTGGGGTCTATCCTGAGATGCCTAGGGAGCTAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTTCTTCTCAGTGGGGTCTATCCTGAGATGCCTAGGGAGCTAGTG  500

seq1  CGCTTGTGTGTGTGTTTGTGTG  522
      ||||||||||||||||||||||
seq2  CGCTTGTGTGTGTGTTTGTGTG  522