BAC Information

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BAC

Clone NameB6Ng01-095P19
Chromosome14 (Build37)
Map Location 111,850,106 - 111,992,142
singlet/doubletdoublet
Overlap genenone
Upstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
Downstream geneSlitrk5, LOC100043501, EG223186
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095P19.bB6Ng01-095P19.g
ACCDH906775DH906776
length1,0481,104
definitionDH906775|Mus musculus domesticus DNA, BAC clone: B6Ng01-095P19, 5' end.DH906776|Mus musculus domesticus DNA, BAC clone: B6Ng01-095P19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,850,106 - 111,851,050)(111,991,018 - 111,992,142)
sequence
gaattcaggtgtgtcctgaagtacagcatcatctggctggctggagtata
gatattccattagtatacacctttaaatcctagcaatgaaaataaggtta
gtttgcagagggaagcagccatgttttaagtgacatctaatagagggtca
gacaaactgatgggccagaacaggtttgggtagaatgaggcagagatgcc
caattctcataagaacagtgcagaaatgagaggctatataagaccactgc
agggaaagaaaagggggtgcagtatgtatatatgacacttttttatggac
aagacagaacttttaaagatataagttgcagagagaatgagctaaacaca
atgaagccagaatgagccaaataatgagaaagaacctgaagattaggtga
tattgcccaagttattatgaggccaagcagagcaaaatcaggcagaaggt
gaaaaaggccagtttgagtcattcagctgggagagaagttggggccagaa
cagctgagttgattcagtaagccagagctcaaagagaagtaaaaattgtg
agtttactcagcagtaatcctacaagaagacaattgcaactgttgaggaa
gagttacattatagggttgcccttgctggacagcttttaatgtgtctttc
atgcatttttgtgttgtatttttgatatccatttattttcaggttttcat
ttttttatattctctgttgacaaaatcttaatttattaatttactctatt
tcaatctctgattctgtgtcatcaggaaaacataattctttcatttttaa
tgtttgttaatagtttgcgattagtttttggtttttgaaatttttctacg
tatttaaatgaatgtagtattttataaaacatttcatcacattaaatatt
attgatttaatgacaataaatttagaataaagtcatattaatgattaatt
ttttactaatggtaaattatgcacataattttcccacagtgtctatctta
aataacctgttgttgatttagaatgtgatattattaaagtgaattaaa
gaattcacattttcattttttaaattgtataattgttgccaaaattaaag
gacagtgtcttgacaaatgccaaacaccaaggattcaaagtccttctaaa
actgtctttgggaacaaaaaaaaaaaaaaaaatgggagttattttaaata
ggttagataccaaaataaatccagaagattgacaaaaaacgaatcatgct
gttttcacatccgagatcaaaagaagcttccaaataatttataagacttc
tgatttaatgccatatggttggcatctttgcaataaacagcttgaacttc
cttttaaaatttttctcagaccatcagaaaataaacataaaaaacccaaa
cctaaaattaacaactgattgctacaaacagttaaatattgaacagctac
tctactttatcatttggttaaggctcattctctcatgccctatatcactt
tgtacgtccagttacatcatctctagaactttttgatgaccatcaggtta
gtagtcaagtttagtaagttcacatttcaaatttggcactcatcccatta
ctggtactgaggcgggatgcttgaggtacttttgtcttactttgcttatc
tgtaaattaagagctatgatagaagcaatttagaaatgcatataaactat
gaaaaaacacttaatattttactaaaacagcttactgataggttactatt
aaaaataaaactctcttggcttgtactcagggcttcagtgatggaaatgg
agaggagtagcctgaggaaaagaaggtccagtgaccaaagagggatctaa
ctcaaggggaggtcacaaggcctgacactattactgagcctatggatctc
tcacaaatggaaccttacttgactgccttctgaaagctcacaagcagcag
aaagagtcagatgcagatatttgcactcaccaatggacagaagctgctga
cacctgtgttaagttagggtaaagatgagagctgaggagggaggtggtcc
tgtaaagaatcacatctcactaactggaccactggaccatcaccaggccc
atacagcagctgatatgagtcctctaactataagcgagactgccagatct
gggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_111850106_111851050
seq2: B6Ng01-095P19.b_156_1091

seq1  AAGCAGCCATGTTTTAAGTGACATCTAATAGAGGGTCAGACAAACTGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCCATGTTTTAAGTGACATCTAATAGAGGGTCAGACAAACTGATG  50

seq1  GGCCAGAACAGGTTTGGGTAGAATGAGGCAGAGATGCCCAATTCTCATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGAACAGGTTTGGGTAGAATGAGGCAGAGATGCCCAATTCTCATAA  100

seq1  GAACAGTGCAGAAATGAGAGGCTATATAAGACCACTGCAGGGAAAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTGCAGAAATGAGAGGCTATATAAGACCACTGCAGGGAAAGAAAA  150

seq1  GGGGGTGCAGTATGTATATATGACACTTTTTTATGGACAAGACAGAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGCAGTATGTATATATGACACTTTTTTATGGACAAGACAGAACTT  200

seq1  TTAAAGATATAAGTTGCAGAGAGAATGAGCTAAACACAATGAAGCCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGATATAAGTTGCAGAGAGAATGAGCTAAACACAATGAAGCCAGAA  250

seq1  TGAGCCAAATAATGAGAAAGAACCTGAAGATTAGGTGATATTGCCCAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAAATAATGAGAAAGAACCTGAAGATTAGGTGATATTGCCCAAGT  300

seq1  TATTATGAGGCCAAGCAGAGCAAAATCAGGCAGAAGGTGAAAAAGGCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGAGGCCAAGCAGAGCAAAATCAGGCAGAAGGTGAAAAAGGCCAG  350

seq1  TTTGAGTCATTCAGCTGGGAGAGAAGTTGGGGCCAGAACAGCTGAGTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTCATTCAGCTGGGAGAGAAGTTGGGGCCAGAACAGCTGAGTTGA  400

seq1  TTCAGTAAGCCAGAGCTCAAAGAGAAGTAAAAATTGTGAGTTTACTCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTAAGCCAGAGCTCAAAGAGAAGTAAAAATTGTGAGTTTACTCAGC  450

seq1  AGTAATCCTACAAGAAGACAATTGCAACTGTTGAGGAAGAGTTACATTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATCCTACAAGAAGACAATTGCAACTGTTGAGGAAGAGTTACATTAT  500

seq1  AGGGTTGCCCTTGCTGGACAGCTTTTAATGTGTCTTTCATGCATTTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGCCCTTGCTGGACAGCTTTTAATGTGTCTTTCATGCATTTTTGT  550

seq1  GTTGTATTTTTGATATCCATTTATTTTCAGGTTTTCATTTTTTTATATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATTTTTGATATCCATTTATTTTCAGGTTTTCATTTTTTTATATTC  600

seq1  TCTGTTGACAAAATCTTAATTTATTAATTTACTCTATTTCAATCTCTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGACAAAATCTTAATTTATTAATTTACTCTATTTCAATCTCTGAT  650

seq1  TCTGTGTCATCAGGAAAACATAATTCTTTCATTTTTAATGTTTGTTAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTCATCAGGAAAACATAATTCTTTCATTTTTAATGTTTGTTAATA  700

seq1  GTTTGCGATTAGTTTTTGGTTTTTGAAATTTTTCTACGTATTTAAATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCGATTAGTTTTTGGTTTTTGAAATTTTTCTACGTATTTAAATGAA  750

seq1  TGTAGTATTTTATAAAACATTTCATCACATTAAAATATTATTGAATTAAT  800
      ||||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  TGTAGTATTTTATAAAACATTTCATCACATT-AAATATTATTGATTTAAT  799

seq1  GACAATAAAATTTAAGAAATAAAAAGTCAATATTAATGAATTAATTTTTT  850
      |||||||||  || |||   | |||||| ||||||||| |||||||||||
seq2  GACAATAAA--TTTAGA---ATAAAGTC-ATATTAATG-ATTAATTTTTT  842

seq1  ACTAATGGTAAATTATTGCACATAATTTTCCCACAGTGTCTATCTTAAAT  900
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACTAATGGTAAATTA-TGCACATAATTTTCCCACAGTGTCTATCTTAAAT  891

seq1  TAACTGTTGTTGA-TTAGAATGTGATATTATTAGAGTGAAATTAAA  945
       | |||||||||| ||||||||||||||||||| |||| |||||||
seq2  AACCTGTTGTTGATTTAGAATGTGATATTATTAAAGTG-AATTAAA  936

seq1: chr14_111991018_111992142
seq2: B6Ng01-095P19.g_67_1170 (reverse)

seq1  ACCCAGATCTGGCAGTCCTCTGCTCTATATGTTTTGGGGGACTCATATCA  50
      |||||||||||||||| ||| ||| ||||    || | ||||||||||||
seq2  ACCCAGATCTGGCAGT-CTC-GCT-TATA---GTTAGAGGACTCATATCA  44

seq1  GCTGCTGTATGGTGCCTGGTTGATGGTCCAGTGGTCCAGGTTAGTTGAGA  100
      |||||||||||| |||||| |||||||||||||||||| ||||| |||||
seq2  GCTGCTGTATGG-GCCTGG-TGATGGTCCAGTGGTCCA-GTTAG-TGAGA  90

seq1  CTGCTGATCCTTCTACAGGACCACCTCCCTCCTCAGCTTCTTCCATCTTT  150
       || |||| ||| |||||||||||||||||||||||| |||  |||||||
seq2  -TG-TGATTCTT-TACAGGACCACCTCCCTCCTCAGC-TCT--CATCTTT  134

seq1  ACCCTAACTTAACCACAGGTGTCAGCAGCTTCTGTCCATTGGTTGGGTGC  200
      |||||||||||| ||||||||||||||||||||||||||||| || ||||
seq2  ACCCTAACTTAA-CACAGGTGTCAGCAGCTTCTGTCCATTGG-TGAGTGC  182

seq1  AAATATCTGCATCTGACTCTTTCTGCTGCTTGTTGAGCTTTTCAGAAGGC  250
      |||||||||||||||||||||||||||||||| ||||| |||||||||||
seq2  AAATATCTGCATCTGACTCTTTCTGCTGCTTG-TGAGC-TTTCAGAAGGC  230

seq1  AGTCAAGTAAGGTTCCATTTGTGAGAGATCCATAGGCTCAGTAATAGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGTAAGGTTCCATTTGTGAGAGATCCATAGGCTCAGTAATAGTGT  280

seq1  CAGGCCTTGTGACCTCCCCTTGAGTTAGATCCCTCTTTGGTCACTGGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTTGTGACCTCCCCTTGAGTTAGATCCCTCTTTGGTCACTGGACC  330

seq1  TTCTTTTCCTCAGGCTACTCCTCTCCATTTCCATCACTGAAGCCCTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCCTCAGGCTACTCCTCTCCATTTCCATCACTGAAGCCCTGAGT  380

seq1  ACAAGCCAAGAGAGTTTTATTTTTAATAGTAACCTATCAGTAAGCTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCAAGAGAGTTTTATTTTTAATAGTAACCTATCAGTAAGCTGTTT  430

seq1  TAGTAAAATATTAAGTGTTTTTTCATAGTTTATATGCATTTCTAAATTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAAATATTAAGTGTTTTTTCATAGTTTATATGCATTTCTAAATTGC  480

seq1  TTCTATCATAGCTCTTAATTTACAGATAAGCAAAGTAAGACAAAAGTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCATAGCTCTTAATTTACAGATAAGCAAAGTAAGACAAAAGTACC  530

seq1  TCAAGCATCCCGCCTCAGTACCAGTAATGGGATGAGTGCCAAATTTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCATCCCGCCTCAGTACCAGTAATGGGATGAGTGCCAAATTTGAAA  580

seq1  TGTGAACTTACTAAACTTGACTACTAACCTGATGGTCATCAAAAAGTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACTTACTAAACTTGACTACTAACCTGATGGTCATCAAAAAGTTCT  630

seq1  AGAGATGATGTAACTGGACGTACAAAGTGATATAGGGCATGAGAGAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGATGTAACTGGACGTACAAAGTGATATAGGGCATGAGAGAATGA  680

seq1  GCCTTAACCAAATGATAAAGTAGAGTAGCTGTTCAATATTTAACTGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAACCAAATGATAAAGTAGAGTAGCTGTTCAATATTTAACTGTTTG  730

seq1  TAGCAATCAGTTGTTAATTTTAGGTTTGGGTTTTTTATGTTTATTTTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATCAGTTGTTAATTTTAGGTTTGGGTTTTTTATGTTTATTTTCTG  780

seq1  ATGGTCTGAGAAAAATTTTAAAAGGAAGTTCAAGCTGTTTATTGCAAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTGAGAAAAATTTTAAAAGGAAGTTCAAGCTGTTTATTGCAAAGA  830

seq1  TGCCAACCATATGGCATTAAATCAGAAGTCTTATAAATTATTTGGAAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACCATATGGCATTAAATCAGAAGTCTTATAAATTATTTGGAAGCT  880

seq1  TCTTTTGATCTCGGATGTGAAAACAGCATGATTCGTTTTTTGTCAATCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGATCTCGGATGTGAAAACAGCATGATTCGTTTTTTGTCAATCTT  930

seq1  CTGGATTTATTTTGGTATCTAACCTATTTAAAATAACTCCCATTTTTTTT  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTGGATTTATTTTGGTATCTAACCTATTTAAAATAACTCCCA-TTTTTTT  979

seq1  TTTTTTTTTTGTTCCCAAAGACAGTTTTAGAAGGACTTTGAATCCTTGGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTGTTCCCAAAGACAGTTTTAGAAGGACTTTGAATCCTTGGT  1029

seq1  GTTTGGCATTTGTCAAGACACTGTCCTTTAATTTTGGCAACAATTATACA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCATTTGTCAAGACACTGTCCTTTAATTTTGGCAACAATTATACA  1079

seq1  ATTTAAAAAATGAAAATGTGAATTC  1125
      |||||||||||||||||||||||||
seq2  ATTTAAAAAATGAAAATGTGAATTC  1104