BAC Information

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BAC

Clone NameB6Ng01-097C15
Chromosome14 (Build37)
Map Location 113,215,293 - 113,370,556
singlet/doubletdoublet
Overlap geneLOC100043509
Upstream geneLOC100043501, EG223186
Downstream geneTpm3-rs7, LOC100043510, LOC382947
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097C15.bB6Ng01-097C15.g
ACCDH907609DH907610
length1,2001,165
definitionDH907609|Mus musculus domesticus DNA, BAC clone: B6Ng01-097C15, 5' end.DH907610|Mus musculus domesticus DNA, BAC clone: B6Ng01-097C15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,369,344 - 113,370,556)(113,215,293 - 113,216,468)
sequence
gaattccagggccaagaagtgggagtgggtgaataggggagcagggcagg
gagagggtatagggtactttcaggataccatttgaaatgtaaatgaagaa
aatatctaataaaagagaaagaaagaagaaactaggtttctgaaacaaat
gaagattgtaattctgaaggctcatccaccaacaaaaatctttatctctt
aatgttctccatcctaaagattccacagtcttcccaaacattaccacttc
tggggaccaaagtttttaacagatgaaccaattgggggagagttgcttat
attcatcctggaagaaatagttaaagaatgtggttggattttttttgaat
aaattaatccttcacttatatttcttagtaaggtccatttgctgtgatac
aaatacagacagacttggggaacaaaaatagaacacagttattaaaacaa
agtagggactaactagtagagaggaggaggacaggagaggaaaaggaggc
ataaaatatggtagggatgaaagtaatgaaaatgcattatataaaggtgt
gagtaatatcatgaacttagtaaataaatgcagctgctttcattcttgta
ccttaatataaaaattccaataaattgtgcagtttgtaggcatcataatc
atgttcttggccataaaagagcatgagaattccacaatttaggaggaagt
gcactgtctgataaggattcactttttgggtttgtatatcgcacctaccc
aacacattctctggtaaataaaggcatacaagatcccccccctccccagt
tatattttcctttaagagactaattacaaggaggaatgctccaaattcaa
agacttcacctgagtgtctccttctttgggcttgagttcaacaaacaaat
ttagagaacagggcagctgattccttcagagaacattagaaaatgtaagg
ctgcataattgcactgtgtttctaagaacagttcagcaagagtgccactt
caatcagattgtccgcggaaatatataggtttttttttcagataatagaa
aaaaatcaagtgcactcaatttctgaatatctcatttcaattttgagtga
attttgcctgggtttcaaacatattaccaagaaaagatggttacatgaaa
actggctaatggtcctaaggcttatacgttatcaagtgaaccactacctt

gaattccttcaataaatgaatggcattttgttactcctcattccataaat
catttaatattgtttgtgttcaggattttcacacagagaaaatatatatt
aatttttcttgtatacatatttattcttttctgttcatacataaaatatt
tttacaataaaatgtttgaaaaatcttaaataaaaatgaaagccattgag
ctgcccaatgatattacattttctattatagattatatatattagaatat
aaaaaatggtgggaatattggcaggtaaaatgggttgtttactccaagta
actgaatgacatgacttatacaaaccaacttaattgtttctttataatta
ttggaaaaattgttttacataaaaatgtattgattctaaaaatattaatg
tatgaagaatagttccatttcacataaggaacaatgttttgaacaaagtt
agcattgtggtgagtttttatccatttactttgaagaaatagagaatttt
tagtgaaggattctctaaaattgcagaaatcaattgcatgaagaaagaca
tgtggcaacacatgttattgaagttcagttttcagtaatcgggtatttaa
aaaatattaacaatcattgatatcttagagaaaagtaaaagttggaaatt
aagcagagattaaaaaagcaaattatcttccttaattgtaagtattttat
taatgtctttcatatttttctgatattatgttattatattttgattttgc
agtaaatataattgtaagatttgtcaactggaaattagatcaatgcaatg
atctattatacaattactaactctttgaaaaaatatttgttctttttgaa
tatttgaggcaatttactgagaattacatgtgaatttccatttttctaaa
tgtaataaaaagggcagtacatagtatattaacttagaaaacttatctga
taagtttatattttatactagtcaaaaagggtagaaaaaatatttcagtc
cattattaatttggagtatatggaaacttgttttttaaattattctttga
agttttaggaacttaaggaagtacctcggaaaatatataggcactagaaa
ttaacggaaaaatctaaatagcattcttttacaaggcactgctaaatacg
agttgactgaactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113369344_113370556
seq2: B6Ng01-097C15.b_47_1246 (reverse)

seq1  AAGGTAAGTGGTTCA-TTGATAAATGTATTAAGCATTTAGGATCATTAG-  48
      ||||| ||||||||| ||||| || ||| |||||  |||||| |||||| 
seq2  AAGGT-AGTGGTTCACTTGAT-AACGTA-TAAGC-CTTAGGACCATTAGC  46

seq1  CAGTTCTCCATGTAAACCATCTTTCTTGGGTAAATATGTTTGGAAAACCA  98
      ||||| | ||||| ||||||||||  | ||| ||||||||||  ||||| 
seq2  CAGTT-TTCATGT-AACCATCTTTTCTTGGT-AATATGTTTG--AAACCC  91

seq1  AGGCAAAATTCACTTCAAAATTGAAATGAGATATTTCAGAAATGTGAAGT  148
      ||||||||||||| ||||||||||||||||||| ||||||||| || |||
seq2  AGGCAAAATTCAC-TCAAAATTGAAATGAGATA-TTCAGAAAT-TG-AGT  137

seq1  GCACTTGA-TTGTTTCTATTATCTGAAAAAAAAAACCTATATATTTCTGC  197
      |||||||| || ||||||||||||| ||||||||||||||||||||| ||
seq2  GCACTTGATTTTTTTCTATTATCTG-AAAAAAAAACCTATATATTTCCGC  186

seq1  GGACAATTCTGATTTGAAGTGGCACTCTTGCTGAACTGTTCTTAGAAACA  247
      |||||| ||||| |||||||||||||||||||||||||||||||||||||
seq2  GGACAA-TCTGA-TTGAAGTGGCACTCTTGCTGAACTGTTCTTAGAAACA  234

seq1  CAGTGCAATTATGCAGCCTTACATTTTCTAATGTTCTCTGAAGGATTCAG  297
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAGTGCAATTATGCAGCCTTACATTTTCTAATGTTCTCTGAAGGAATCAG  284

seq1  CTGCCCTGTTCTCTAAATTTGTTTGTTGAAACTCAAGCCCAAAGAAGGAG  347
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTGCCCTGTTCTCTAAATTTGTTTGTTG-AACTCAAGCCCAAAGAAGGAG  333

seq1  ACACTCAGGTGAAGTCTTTGAATTTGGAGCATTCCTCCTTGTAATTAGTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGGTGAAGTCTTTGAATTTGGAGCATTCCTCCTTGTAATTAGTC  383

seq1  TCTT-AAGGAAAATATAACTGGGGAGGGGGGGGATCTTGTATGCCTTTAT  446
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAGGAAAATATAACTGGGGAGGGGGGGGATCTTGTATGCCTTTAT  433

seq1  TTACCAGAGAATGTGTTGGGTAGGTGCGATATACAAACCCAAAAAGTGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGAGAATGTGTTGGGTAGGTGCGATATACAAACCCAAAAAGTGAA  483

seq1  TCCTTATCAGACAGTGCACTTCCTCCTAAATTGTGGAATTCTCATGCTCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATCAGACAGTGCACTTCCTCCTAAATTGTGGAATTCTCATGCTCT  533

seq1  TTTATGGCCAAGAACATGATTATGATGCCTACAAACTGCACAATTTATTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGCCAAGAACATGATTATGATGCCTACAAACTGCACAATTTATTG  583

seq1  GAATTTTTATATTAAGGTACAAGAATGAAAGCAGCTGCATTTATTTACTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTTATATTAAGGTACAAGAATGAAAGCAGCTGCATTTATTTACTA  633

seq1  AGTTCATGATATTACTCACACCTTTATATAATGCATTTTCATTACTTTCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATGATATTACTCACACCTTTATATAATGCATTTTCATTACTTTCA  683

seq1  TCCCTACCATATTTTATGCCTCCTTTTCCTCTCCTGTCCTCCTCCTCTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACCATATTTTATGCCTCCTTTTCCTCTCCTGTCCTCCTCCTCTCT  733

seq1  ACTAGTTAGTCCCTACTTTGTTTTAATAACTGTGTTCTATTTTTGTTCCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTAGTCCCTACTTTGTTTTAATAACTGTGTTCTATTTTTGTTCCC  783

seq1  CAAGTCTGTCTGTATTTGTATCACAGCAAATGGACCTTACTAAGAAATAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTGTCTGTATTTGTATCACAGCAAATGGACCTTACTAAGAAATAT  833

seq1  AAGTGAAGGATTAATTTATTCAAAAAAAATCCAACCACATTCTTTAACTA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAGGATTAATTTATTCAAAAAAAATCCAACCACATTCTTTAACTA  883

seq1  TTTCTTCCAGGATGAATATAAGCAACTCTCCCCCAATTGGTTCATCTGTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCAGGATGAATATAAGCAACTCTCCCCCAATTGGTTCATCTGTT  933

seq1  AAAAACTTTGGTCCCCAGAAGTGGTAATGTTTGGGAAGACTGTGGAATCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTTTGGTCCCCAGAAGTGGTAATGTTTGGGAAGACTGTGGAATCT  983

seq1  TTAGGATGGAGAACATTAAGAGATAAAGATTTTTGTTGGTGGATGAGCCT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATGGAGAACATTAAGAGATAAAGATTTTTGTTGGTGGATGAGCCT  1033

seq1  TCAGAATTACAATCTTCATTTGTTTCAGAAACCTAGTTTCTTCTTTCTTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATTACAATCTTCATTTGTTTCAGAAACCTAGTTTCTTCTTTCTTT  1083

seq1  CTCTTTTATTAGATATTTTCTTCATTTACATTTCAAATGGTATCCTGAAA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTATTAGATATTTTCTTCATTTACATTTCAAATGGTATCCTGAAA  1133

seq1  GTACCCTATACCCTCTCCCTGCCCTGCTCCCCTATTCACCCACTCCCACT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCTATACCCTCTCCCTGCCCTGCTCCCCTATTCACCCACTCCCACT  1183

seq1  TCTTGGCCCTGGAATTC  1213
      |||||||||||||||||
seq2  TCTTGGCCCTGGAATTC  1200

seq1: chr14_113215293_113216468
seq2: B6Ng01-097C15.g_71_1235

seq1  GAATTCCTTCAATAAATGAATGGCATTTTGTTACTCCTCATTCCATAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCAATAAATGAATGGCATTTTGTTACTCCTCATTCCATAAAT  50

seq1  CATTTAATATTGTTTGTGTTCAGGATTTTCACACAGAGAAAATATATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATATTGTTTGTGTTCAGGATTTTCACACAGAGAAAATATATATT  100

seq1  AATTTTTCTTGTATACATATTTATTCTTTTCTGTTCATACATAAAATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCTTGTATACATATTTATTCTTTTCTGTTCATACATAAAATATT  150

seq1  TTTACAATAAAATGTTTGAAAAATCTTAAATAAAAATGAAAGCCATTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATAAAATGTTTGAAAAATCTTAAATAAAAATGAAAGCCATTGAG  200

seq1  CTGCCCAATGATATTACATTTTCTATTATAGATTATATATATTAGAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCAATGATATTACATTTTCTATTATAGATTATATATATTAGAATAT  250

seq1  AAAAAATGGTGGGAATATTGGCAGGTAAAATGGGTTGTTTACTCCAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGGTGGGAATATTGGCAGGTAAAATGGGTTGTTTACTCCAAGTA  300

seq1  ACTGAATGACATGACTTATACAAACCAACTTAATTGTTTCTTTATAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATGACATGACTTATACAAACCAACTTAATTGTTTCTTTATAATTA  350

seq1  TTGGAAAAATTGTTTTACATAAAAATGTATTGATTCTAAAAATATTAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAAAATTGTTTTACATAAAAATGTATTGATTCTAAAAATATTAATG  400

seq1  TATGAAGAATAGTTCCATTTCACATAAGGAACAATGTTTTGAACAAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGAATAGTTCCATTTCACATAAGGAACAATGTTTTGAACAAAGTT  450

seq1  AGCATTGTGGTGAGTTTTTATCCATTTACTTTGAAGAAATAGAGAATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGTGGTGAGTTTTTATCCATTTACTTTGAAGAAATAGAGAATTTT  500

seq1  TAGTGAAGGATTCTCTAAAATTGCAGAAATCAATTGCATGAAGAAAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAGGATTCTCTAAAATTGCAGAAATCAATTGCATGAAGAAAGACA  550

seq1  TGTGGCAACACATGTTATTGAAGTTCAGTTTTCAGTAATCGGGTATTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCAACACATGTTATTGAAGTTCAGTTTTCAGTAATCGGGTATTTAA  600

seq1  AAAATATTAACAATCATTGATATCTTAGAGAAAAGTAAAAGTTGGAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTAACAATCATTGATATCTTAGAGAAAAGTAAAAGTTGGAAATT  650

seq1  AAGCAGAGATTAAAAAAGCAAATTATCTTCCTTAATTGTAAGTATTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGATTAAAAAAGCAAATTATCTTCCTTAATTGTAAGTATTTTAT  700

seq1  TAATGTCTTTCATATTTTTCTGATATTATGTTATTATATTTTGATTTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCTTTCATATTTTTCTGATATTATGTTATTATATTTTGATTTTGC  750

seq1  AGTAAATATAATTGTAAGATTTGTCAACTGGAAATTAGATCAATGCAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATATAATTGTAAGATTTGTCAACTGGAAATTAGATCAATGCAATG  800

seq1  ATCTATTATACAATTACTAACTCTTTGAAAAAAATATTTGTTCTTTTTGA  850
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATCTATTATACAATTACTAACTCTTTG-AAAAAATATTTGTTCTTTTTGA  849

seq1  ATATTTGAGGCAATTTACTGAGAATTACATGTGAATTTCCATTTTTCTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGAGGCAATTTACTGAGAATTACATGTGAATTTCCATTTTTCTAA  899

seq1  ATGTAATAAAAAGGGCAGTTACATAGTATATTAACTTAGAAAAACTTATC  950
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  ATGTAATAAAAAGGGCAG-TACATAGTATATTAACTTAG-AAAACTTATC  947

seq1  TGATAAGTTTATATTTTATACTAGTCAAAAAGGGTAG-AAAAATATTTCA  999
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGATAAGTTTATATTTTATACTAGTCAAAAAGGGTAGAAAAAATATTTCA  997

seq1  GTTCCATTATTAATTT-GAGTATATGGAAACCTTGTTTTCTAAATTAATT  1048
      | |||||||||||||| ||||||||||||| |||||||| |||||| |||
seq2  G-TCCATTATTAATTTGGAGTATATGGAAA-CTTGTTTTTTAAATT-ATT  1044

seq1  CTTTGAAGTTTTTAGAACTTACAGAAGTACCTCAGAAAATATTAATAAGC  1098
      ||||||||||||  |||||||  |||||||||| ||||||||  ||| ||
seq2  CTTTGAAGTTTTAGGAACTTAAGGAAGTACCTCGGAAAATAT--ATAGGC  1092

seq1  ACTAGACATAAACAGAAAAAATTCTAAAATAGCATTCTTTTTACAAGCAA  1148
      |||||| || ||| ||||||  ||| ||||||||||| |||||||||   
seq2  ACTAGAAATTAACGGAAAAA--TCT-AAATAGCATTC-TTTTACAAG-GC  1137

seq1  ACTGCTAAATACGAGTTGACTGACCTCT  1176
      ||||||||||||||||||||||| ||||
seq2  ACTGCTAAATACGAGTTGACTGAACTCT  1165