BAC Information

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BAC

Clone NameB6Ng01-097J14
Chromosome14 (Build37)
Map Location 4,299,042 - 4,300,058
singlet/doubletsinglet
Overlap geneLOC100040801, LOC666336
Upstream geneLOC100040740, LOC100040755, LOC100040767, LOC100040779, LOC100038846, EG666890, LOC100040544, LOC100040797, LOC100040555, LOC100040565, LOC100040578, LOC100040807, LOC100040859, LOC100040870, LOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076
Downstream geneLOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549, LOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676, LOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097J14.bB6Ng01-097J14.g
ACCDH907931DH907932
length1,1101,013
definitionDH907931|Mus musculus domesticus DNA, BAC clone: B6Ng01-097J14, 5' end.DH907932|Mus musculus domesticus DNA, BAC clone: B6Ng01-097J14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacataaaaccagagaccatgaaacttatagaggagaaagtggg
gaaaagcatagaagatatgggcacagggggaaagttcctgaatagaacag
gaatggcttgtgctgtaagattgagaatggacaaatgggacctcatgaaa
ctgcaaagcttctgtaaagcaaaagacaccgtcaataagacaaaaaggcc
accaataggttgggaaaggatctttacctatcccaaatcggataggggac
taataaccaatatgtataaagaacacaagaaggtggacttcagaaaatcc
aataacaccattaaaaattggggctcagagctaaacaaagaattgtcacc
tgaggaataccgaatggcagagaagcacttgaaaaatgttcagcatcctt
aatcatcagggaaatgcaaatcaaaacaaccctgagattccacttcacac
cagtcagaatggctaagatcaaaaattctggtgacagcagatgctggcaa
ggatgtggagaaaaaggaacatttctccgttgttggtgggattgcaagct
tgtacaaccactctggaaatcaatctggcagttcctcagaaaaattggac
ataggactactggaggatcccagaataccactcctgggcatatatccaga
agatgttccaactggtaagaaggacacatgctccaccatgttcatagcag
ccttatttattatagccagaaagctggaaataacccagatgcccctcaac
agaggaatggatacagaaaatgtggtacatttacacaatggagtactact
cagctattaaaaagaatgaatttatgaaattcctagccaatggttggacc
tggagtagcatcatactgagtgaggtaacccaatcacaaagaattcacat
gatatgtactcactgggtaagtggatattatcccagaaacttagaatacc
caagatatggagatacatttgcaaaacacagcaactcagaagactaagac
tgaagtggggacctttgcctttcttatatttgggaacaaaccccaggaat
gagttacgatgacaaattcggagtttagagagaatggattgatcactaga
aatcgctcat
gaattctcatgcttcattagatgtcatgtgcttttgagggggaacgttgg
ttaggactctgacatgcttaagagattttgttagcacccaaatctctagg
gactgtggatgtagtagatgtttcacaacagcaaatataccagctgtgtc
aattcatgtgacatacactccaatttcccagggttttcctgtctcacaga
ggcaaatatctttctcctataggtttaattgtacaaaacatggacaatat
tttctaacggtgtattccttgacagagggcattttttcatatatatatat
atatatatgtatatatacatgagtttcacaaaatctctggtttacaaccc
tatcttttacaaagaaaactccctactcttttgaacatacggaatcatct
acagggcaaatataaatggttaacttgctgtcccttcttcaaaacattat
cctgcacttgctcccattctcaaatacatccagacaatttaagtgggcaa
cagagagtagtggtcatcctggactatacattactgcattgtagcctcat
agcaattacttctccaatatctgtcttccagaattgctaagttgagaaat
gagggtgtttgcaggttgtaacgtcatactgtactcacagcaaatataat
actcagaaggtagggctgggagtgcaatgacctgaattgagatgaaacct
caattttaatgtgtctataaggtcaggatgctgtccctttggcattatca
tctctggctttttgtgttcttatgctggctttgctgaacctgtgccccct
aacctcacaggttaagagtgaaaaatcatgtatatcttctttcagaaaac
atctgaattcactaccttcttgagccacacaatatcatatgcagagctca
aaaatcagggggagatggtgatggcttcaaagatgagggctttttcttac
attaggcgcatattttttcccaatgtgattttccttttctctttcactaa
agggtggcttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_4299042_4300058
seq2: B6Ng01-097J14.g_67_1079 (reverse)

seq1  CACAAGCCACCC-TTAGTGAAAGAGAAAAGGAAAAATCACATTGGAAAAA  49
      |||||||||||| |||||||||||||||||| ||||||||||||| ||||
seq2  CACAAGCCACCCTTTAGTGAAAGAGAAAAGG-AAAATCACATTGGGAAAA  49

seq1  AATATGCGCCCTAATTGTAAGAAAAAGCCCTCATCTTTGAAGCCATCACC  99
      |||||||| ||||| |||||||||||||||||||||||||||||||||||
seq2  AATATGCG-CCTAA-TGTAAGAAAAAGCCCTCATCTTTGAAGCCATCACC  97

seq1  TATCTCCCCCTGATTTTTGAGCTCTGCATATTGATATTGTGTGGCTCAAG  149
       ||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  -ATCTCCCCCTGATTTTTGAGCTCTGCATA-TGATATTGTGTGGCTCAAG  145

seq1  AAGGTAGTGAAATTCAGATGTTTTCTGAAAGAAGATATACATGATTTTTC  199
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGTG-AATTCAGATGTTTTCTGAAAGAAGATATACATGATTTTTC  194

seq1  ACTCTTAAACCTGTGAGGTTAGGGGGCACAGGTTCAGCAAAGCCAGCATA  249
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTT-AACCTGTGAGGTTAGGGGGCACAGGTTCAGCAAAGCCAGCATA  243

seq1  AGAACAC-AAAAGCCAGAGATGATAATGCCAAAGGGACAGCATCCTGACC  298
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACAAAAAGCCAGAGATGATAATGCCAAAGGGACAGCATCCTGACC  293

seq1  TTATAGACACATTAAAATTGAGGTTTCATCTCAATTCAGGTCATTGCACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGACACATTAAAATTGAGGTTTCATCTCAATTCAGGTCATTGCACT  343

seq1  CCCAGCCCTACCTTCTGAGTATTATATTTGCTGTGAGTACAGTATGACGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCCTACCTTCTGAGTATTATATTTGCTGTGAGTACAGTATGACGT  393

seq1  TACAACCTGC-AACACCCTCATTTCTCAACTTAGCAATTCTGGAAGACAG  447
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TACAACCTGCAAACACCCTCATTTCTCAACTTAGCAATTCTGGAAGACAG  443

seq1  ATATTGGAGAAGTAATTGCTATGAGGCTACAATGCAGTAATGTATAGTCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGAGAAGTAATTGCTATGAGGCTACAATGCAGTAATGTATAGTCC  493

seq1  AGGATGACCACTACTCTCTGTTGCCCACTTAAATTGTCTGGATGTATTTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGACCACTACTCTCTGTTGCCCACTTAAATTGTCTGGATGTATTTG  543

seq1  AGAATGGGAGCAAGTGCAGGATAATGTTTTGAAGAAGGGACAGCAAGTTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGGAGCAAGTGCAGGATAATGTTTTGAAGAAGGGACAGCAAGTTA  593

seq1  ACCATTTATATTTGCCCTGTAGATGATTCCGTATGTTCAAAAGAGTAGGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTATATTTGCCCTGTAGATGATTCCGTATGTTCAAAAGAGTAGGG  643

seq1  AGTTTTCTTTGTAAAAGATAGGGTTGTAAACCAGAGATTTTGTGAAACTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTTTGTAAAAGATAGGGTTGTAAACCAGAGATTTTGTGAAACTC  693

seq1  ATGTATATATACATATATATATATATATATATGAAAAAATGCCCTCTGTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATATACATATATATATATATATATATGAAAAAATGCCCTCTGTC  743

seq1  AAGGAATACACCGTTAGAAAATATTGTCCATGTTTTGTACAATTAAACCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATACACCGTTAGAAAATATTGTCCATGTTTTGTACAATTAAACCT  793

seq1  ATAGGAGAAAGATATTTGCCTCTGTGAGACAGGAAAACCCTGGGAAATTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGAAAGATATTTGCCTCTGTGAGACAGGAAAACCCTGGGAAATTG  843

seq1  GAGTGTATGTCACATGAATTGACACAGCTGGTATATTTGCTGTTGTGAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTATGTCACATGAATTGACACAGCTGGTATATTTGCTGTTGTGAAA  893

seq1  CATCTACTACATCCACAGTCCCTAGAGATTTGGGTGCTAACAAAATCTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACTACATCCACAGTCCCTAGAGATTTGGGTGCTAACAAAATCTCT  943

seq1  TAAGCATGTCAGAGTCCTAACCAACGTTCCCCCTCAAAAGCACATGACAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATGTCAGAGTCCTAACCAACGTTCCCCCTCAAAAGCACATGACAT  993

seq1  CTAATGAAGCATGAGAATTC  1017
      ||||||||||||||||||||
seq2  CTAATGAAGCATGAGAATTC  1013