BAC Information

Click to search

BAC

Clone NameB6Ng01-098F05
Chromosome14 (Build37)
Map Location 101,091,855 - 101,092,756
singlet/doubletsinglet
Overlap genenone
Upstream geneEG546623, Klf12, LOC100043413, EG668683, EG668684
Downstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098F05.bB6Ng01-098F05.g
ACCDH908450DH908451
length1,0281,138
definitionDH908450|Mus musculus domesticus DNA, BAC clone: B6Ng01-098F05, 5' end.DH908451|Mus musculus domesticus DNA, BAC clone: B6Ng01-098F05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgaaattttgttttgaatgcagcttgtgattgacaaggttata
ttatcgtttgccttgccagtggaaggattttatctctatattctgttata
actgtacaacaaaccttgttgagttgtagcacatggatacttgtaactgc
tcacattcccatgtagttttgacaaacttggggaagatagttattttcac
tacaccacacaggcaatctgacaagtaggtgtcaatgtccttctaggata
ttattcaacaccatggcacgaagtctttcctgtcacctctctttatctcc
atgagtattaattcattgcatttaccattatagttacaagatacctcatt
agtccttcatctgttctttttaagtttctcctactgaagttgtaacttcc
cttagtgttgcgcgcgcccaactggccaggaagaacgacgctgctacagg
atccttctgcacacgtttattcagtcctgtttcttctttctctatatatc
tcccttgtttatatctcccttgtttatatctcccttgtttttatatctcc
cttgtttttatatctcccttgtttttatatctcccttgtttatatctccc
cactaatagtaatcctctctcgaataataatcctccctctagcctgggcc
tctcactcttttatactctcatccacgcacagcaggccatgccacctcac
caggcacgcagcttcagctaatcagggcagcaggggcaaatctccatcaa
attggattcaccggtatcctggtacacctgtgcagcactcaagatgtttg
tgtctttttatgaggaagtcaggtgcaagtcatatgacttagctgcagtc
cctggcgcctttaggactgccgccacacctgctcctaacatctccccttt
tttcttttttggcagagagaatgtctgtagatagccccccgcagccatgc
cccttaccgtccttgggtgacaaacagcatggttgatccctgtctaggtt
ggtgactgcccagggagcttatcactga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccat
gaggagctagagaagtacccaaaggagctaaagggatctcaaccttatag
tgacacatatgaactaaccagtaccctgagctcttgactctagctgcata
tgtatcaagatgctagtcgcattctgaagaagtcatgaccgcgactttgt
tgcccggtcaggacccaggccaaggggaagtggagtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_101091855_101092756
seq2: B6Ng01-098F05.b_47_948

seq1  GAATTCATGAAATTTTGTTTTGAATGCAGCTTGTGATTGACAAGGTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAAATTTTGTTTTGAATGCAGCTTGTGATTGACAAGGTTATA  50

seq1  TTATCGTTTGCCTTGCCAGTGGAAGGATTTTATCTCTATATTCTGTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCGTTTGCCTTGCCAGTGGAAGGATTTTATCTCTATATTCTGTTATA  100

seq1  ACTGTACAACAAACCTTGTTGAGTTGTAGCACATGGATACTTGTAACTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACAACAAACCTTGTTGAGTTGTAGCACATGGATACTTGTAACTGC  150

seq1  TCACATTCCCATGTAGTTTTGACAAACTTGGGGAAGATAGTTATTTTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTCCCATGTAGTTTTGACAAACTTGGGGAAGATAGTTATTTTCAC  200

seq1  TACACCACACAGGCAATCTGACAAGTAGGTGTCAATGTCCTTCTAGGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCACACAGGCAATCTGACAAGTAGGTGTCAATGTCCTTCTAGGATA  250

seq1  TTATTCAACACCATGGCACGAAGTCTTTCCTGTCACCTCTCTTTATCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAACACCATGGCACGAAGTCTTTCCTGTCACCTCTCTTTATCTCC  300

seq1  ATGAGTATTAATTCATTGCATTTACCATTATAGTTACAAGATACCTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTATTAATTCATTGCATTTACCATTATAGTTACAAGATACCTCATT  350

seq1  AGTCCTTCATCTGTTCTTTTTAAGTTTCTCCTACTGAAGTTGTAACTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTCATCTGTTCTTTTTAAGTTTCTCCTACTGAAGTTGTAACTTCC  400

seq1  CTTAGTGTTGCGCGCGCCCAACTGGCCAGGAAGAACGACGCTGCTACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGTTGCGCGCGCCCAACTGGCCAGGAAGAACGACGCTGCTACAGG  450

seq1  ATCCTTCTGCACACGTTTATTCAGTCCTGTTTCTTCTTTCTCTATATATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCTGCACACGTTTATTCAGTCCTGTTTCTTCTTTCTCTATATATC  500

seq1  TCCCTTGTTTATATCTCCCTTGTTTATATCTCCCTTGTTTTTATATCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGTTTATATCTCCCTTGTTTATATCTCCCTTGTTTTTATATCTCC  550

seq1  CTTGTTTTTATATCTCCCTTGTTTTTATATCTCCCTTGTTTATATCTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTTATATCTCCCTTGTTTTTATATCTCCCTTGTTTATATCTCCC  600

seq1  CACTAATAGTAATCCTCTCTCGAATAATAATCCTCCCTCTAGCCTGGGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATAGTAATCCTCTCTCGAATAATAATCCTCCCTCTAGCCTGGGCC  650

seq1  TCTCACTCTTTTATACTCTCATCCACGCACAGCAGGCCATGCCACCTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTCTTTTATACTCTCATCCACGCACAGCAGGCCATGCCACCTCAC  700

seq1  CAGGCACGCAGCTTCAGCTAATCAGGGCAGCAGGGGCAAATCTCCATCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACGCAGCTTCAGCTAATCAGGGCAGCAGGGGCAAATCTCCATCAA  750

seq1  ATTGGATTCACCGGTATCCTGGTACACCTGTGCAGCACTCAAGATGTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATTCACCGGTATCCTGGTACACCTGTGCAGCACTCAAGATGTTTG  800

seq1  TGTCTTATTATGAGGAAGTCAGGTGCAAGTCATATGACTTAGCTGCAGTC  850
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTTATGAGGAAGTCAGGTGCAAGTCATATGACTTAGCTGCAGTC  850

seq1  CCTGGCGCCTTTAGGACTGCCGCCACACCTGCTCCTAACATCTCCCCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCTGGCGCCTTTAGGACTGCCGCCACACCTGCTCCTAACATCTCCCCTTT  900

seq1  TT  902
      ||
seq2  TT  902