BAC Information

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BAC

Clone NameB6Ng01-098I21
Chromosome14 (Build37)
Map Location 71,865,528 - 72,032,014
singlet/doubletdoublet
Overlap geneLOC100043136
Upstream genePhyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2, LOC100043132
Downstream geneLOC668477, LOC668482, LOC675957, Fndc3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098I21.bB6Ng01-098I21.g
ACCDH908613DH908614
length1,0561,109
definitionDH908613|Mus musculus domesticus DNA, BAC clone: B6Ng01-098I21, 5' end.DH908614|Mus musculus domesticus DNA, BAC clone: B6Ng01-098I21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,865,528 - 71,866,564)(72,030,893 - 72,032,014)
sequence
gaattctgagaattttttaaaaaatgtattttgaataaagcatttcattg
gatattttcactccagatatttcactcagtctgttgcttgccttctttta
acaacacaatttaagagactctaatttttatcaataattggtacaattaa
ttttccatttatatattttatttttagtgtagggtatacagaattcattg
gcaattttaaagtcagacagaattgatcttggatttatttactttggaga
tggtaaggacggaatgtaggatatctatgcagacattctccctgctatgc
aaacattctcccactttaccacaccccaagtcctctgttggcttttcaaa
gcttaaatgtttttaatgtttagatttacattctaatttttctgcatgtt
ataatgttagattattattgttgttgttgttgttgttgctgctgctgctg
ctgctgctgttgttagagcagaagtctgttcaattgttctagcaacattt
ctggcagagataaaaaaaatccctcaaatagcttttgaataaatttatat
aagtgtgcatttatggccatacttctgaactttgtagtatgctccacaat
aaaaagaataggtttgcacatctattccttcatcagtacagctttggttt
aactgttgtggctgtagagaaaattccaaacttttgtaacttggttttca
tatctttatttttctctttcaaattagtttaatgtatttgagtttctctg
agtttccatctttacaattctatgaaacatatgcaagatcgttactagca
tttttatagaactgcataaaacttgcacataaattttggagagaaccggg
tttctccactattcttgagtcatttaacccacagactgtgttttgtccat
ttgcttctatggtgccttcatttgtttccctcatcagcactgtgtaactt
ttagcatctagaatcatatatgttttatttttctattctattcaaggtat
tttgttctaggggcctaaccctaaatgatactgtttttgtttgcaaattg
cttgat
gaattcattagaccttggcatgctgcaaggataaattgagcagtagacaa
cactgtgtgacaagcagatcaaagggttatatgcaccacagattatattt
taaggggtccaggtaattcttttgggtagaatggttggattttcaattaa
tcagtcaatcaatcaatctcagatcccctctactcttcagaatgagaaga
tggaaaaagttaacacaaggtccttcccagagggcaacatttagccacat
aaaacaataagcagacagtgccaggcagtatatcaagtgttaaattgggt
gttattgactctaagtgcagccagaattcagagatgggaaaaaccaatgg
caccggggccttgtatggagctctgggccatcactcctaaagtttcttgg
gggcaggggctatataacatgtgggtggtttttttctttctgtttttctt
gcttttttcttcttttatctttcctctcatgtacccaagtacagtgctgc
ctcatcatggatatataacattgcctttctttatgcttcccttaactact
ttcaaaatggatttgaagaaacttatagggatataaagtaaataaacatg
ctttaaatatatatgtggaagaaaggtgtagatacaaaaagcagaactag
ggatgaggaaatagaatggtaatgcacagcctataaactctcatgccttg
gtaacagacaaatcatggatttggctctaagctttcagtggaaaatctga
gtagaaaaacctgattatttatgcacttcatattgtccctttgacaaaac
agaccaattgctcagcagacacaaaactattctggatacttaagccttga
atatatccatccctagagtcctcatccagcagcatgctgcaatgtaatga
acatcatcctcaaggcattctcagtgcacactcaactgggagcttggtat
gactgttgttcatccattcttcccactgcctggtactattcctatcagga
tcttgagtgtatgataaacattttaatagataaagaaatgggacaattca
gaagggaccattctgtaagactccatagaataaatgaacactttcatctc
cttctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_71865528_71866564
seq2: B6Ng01-098I21.b_49_1097

seq1  GAATTCTGAGAATTTTTTAAAAAATGTATTTTGAATAAAGCATTTCATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGAATTTTTTAAAAAATGTATTTTGAATAAAGCATTTCATTG  50

seq1  GATATTTTCACTCCAGATATTTCACTCAGTCTGTTGCTTGCCTTCTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTCACTCCAGATATTTCACTCAGTCTGTTGCTTGCCTTCTTTTA  100

seq1  ACAACACAATTTAAGAGACTCTAATTTTTATCAATAATTGGTACAATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACAATTTAAGAGACTCTAATTTTTATCAATAATTGGTACAATTAA  150

seq1  TTTTCCATTTATATATTTTATTTTTAGTGTAGGGTATACAGAATTCATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATTTATATATTTTATTTTTAGTGTAGGGTATACAGAATTCATTG  200

seq1  GCAATTTTAAAGTCAGACAGAATTGATCTTGGATTTATTTACTTTGGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTTTAAAGTCAGACAGAATTGATCTTGGATTTATTTACTTTGGAGA  250

seq1  TGGTAAGGACGGAATGTAGGATATCTATGCAGACATTCTCCCTGCTATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGGACGGAATGTAGGATATCTATGCAGACATTCTCCCTGCTATGC  300

seq1  AAACATTCTCCCACTTTACCACACCCCAAGTCCTCTGTTGGCTTTTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTCTCCCACTTTACCACACCCCAAGTCCTCTGTTGGCTTTTCAAA  350

seq1  GCTTAAATGTTTTTAATGTTTAGATTTACATTCTAATTTTTCTGCATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAATGTTTTTAATGTTTAGATTTACATTCTAATTTTTCTGCATGTT  400

seq1  ATAATGTTAGATTATTATTGTTGTTGTTGTTGTTGTTGCTGCTGCTGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTTAGATTATTATTGTTGTTGTTGTTGTTGTTGCTGCTGCTGCTG  450

seq1  CTGCTGCTGTTGTTAGAGCAGAAGTCTGTTCAATTGTTCTAGCAACATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCTGTTGTTAGAGCAGAAGTCTGTTCAATTGTTCTAGCAACATTT  500

seq1  CTGGCAGAGATAAAAAAAATCCCTCAAATAGCTTTTGAATAAATTTATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGAGATAAAAAAAATCCCTCAAATAGCTTTTGAATAAATTTATAT  550

seq1  AAGTGTGCATTTATGGCCATACTTCTGAACTTTGTAGTATGCTCCACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGCATTTATGGCCATACTTCTGAACTTTGTAGTATGCTCCACAAT  600

seq1  AAAAAGAATAGGTTTGCACATCTATTCCTTCATCAGTACAGCTTTGGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAATAGGTTTGCACATCTATTCCTTCATCAGTACAGCTTTGGTTT  650

seq1  AACTGTTGTGGCTGTAGAGAAAATTCCAAACTTTTGTAACTTGGTTTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTGTGGCTGTAGAGAAAATTCCAAACTTTTGTAACTTGGTTTTCA  700

seq1  TATCTTTATTTTTCTCTTTCAAATTAGTTTAATGTATTTGAGTTTCTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTATTTTTCTCTTTCAAATTAGTTTAATGTATTTGAGTTTCTCTG  750

seq1  AGTTTCCATCTTTACAATTCTATGAAACATATGCAAGATCGTTACTAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCATCTTTACAATTCTATGAAACATATGCAAGATCGTTACTAGCA  800

seq1  TTTTTATAGAACTGCATAAAACTTGCACATAAA-TTTGGAGAGAACC-GG  848
      ||||||||||||||||||||||||||||||||| ||||||||||||| ||
seq2  TTTTTATAGAACTGCATAAAACTTGCACATAAATTTTGGAGAGAACCGGG  850

seq1  TTTCTCCACTATTC-TGAGTCATTTAACCCACAGACTGTG-TTTGTCCAT  896
      |||||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  TTTCTCCACTATTCTTGAGTCATTTAACCCACAGACTGTGTTTTGTCCAT  900

seq1  TTGCTTCTAT-GTGCCTTCATTTGTTTCCCTCATCAGCACTGTGTAAC-T  944
      |||||||||| ||||||||||||||||||||||||||||||||||||| |
seq2  TTGCTTCTATGGTGCCTTCATTTGTTTCCCTCATCAGCACTGTGTAACTT  950

seq1  TTAGCATCTAGAATCATATATGTTATA-TTTTCTA-TCTATTCAA-GTAT  991
      |||||||||||||||||||||||| || ||||||| ||||||||| ||||
seq2  TTAGCATCTAGAATCATATATGTTTTATTTTTCTATTCTATTCAAGGTAT  1000

seq1  TTTGTCTT--GGGCCTTACCCTAAATGATACTG-TTTTGTTTGCAAATT  1037
      |||||  |  |||||| |||||||||||||||| |||||||||||||||
seq2  TTTGTTCTAGGGGCCTAACCCTAAATGATACTGTTTTTGTTTGCAAATT  1049

seq1: chr14_72030893_72032014
seq2: B6Ng01-098I21.g_67_1175 (reverse)

seq1  AGAGAGA--GAGATGAAAGTG-TCATTTATATACTATGAAGTTCTAACAG  47
      |||||||  |||||||||||| |||||  ||| ||||| || ||| ||||
seq2  AGAGAGAAGGAGATGAAAGTGTTCATT--TATTCTATGGAG-TCTTACAG  47

seq1  AAATTGTTCCCTTCTTGAATTTGTCCCATTTCTTTTTATCTTATTAAATG  97
      ||  || ||||||| |||| ||||||||||||  |||||||  | |||||
seq2  AA--TGGTCCCTTC-TGAA-TTGTCCCATTTC--TTTATCTATTAAAATG  91

seq1  TTTATCATTAACACTCAAGATTCCTGATAAGGAATAGTACCAGGCAGTGG  147
      ||||||||  |||||||||| ||||||| |||||||||||||||||||||
seq2  TTTATCAT--ACACTCAAGA-TCCTGAT-AGGAATAGTACCAGGCAGTGG  137

seq1  GAAGAATGGATGGAACAAACAGTCATACCAAGCTCCCAGTTGAGTGTGCA  197
      ||||||||||| |||| |||||||||||||||||||||||||||||||||
seq2  GAAGAATGGAT-GAAC-AACAGTCATACCAAGCTCCCAGTTGAGTGTGCA  185

seq1  CTGAGAATGCCTTGAGGATGATGTTCATTACATTGCAGCATGCCTGCTGG  247
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTGAGAATGCCTTGAGGATGATGTTCATTACATTGCAGCATG-CTGCTGG  234

seq1  ATGAGGACTCTAGGGATGGATATATTCAAGGCTTAAGTATCCAGAATAGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGACTCTAGGGATGGATATATTCAAGGCTTAAGTATCCAGAATAGT  284

seq1  TTTGTGTCTGCTGAGCAATTGGTCTGTTTTGTCAAAGGGACAATATGAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTCTGCTGAGCAATTGGTCTGTTTTGTCAAAGGGACAATATGAAG  334

seq1  TGCATAATTAATCAGGTTTTTCTACTCAGATTTTCCACTGAAAGCTTAGA  397
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAAATAATCAGGTTTTTCTACTCAGATTTTCCACTGAAAGCTTAGA  384

seq1  GCCAAATCCATGATTTGTCTGTTACCAAGGCATGAGAGTTTATAGGCTGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATCCATGATTTGTCTGTTACCAAGGCATGAGAGTTTATAGGCTGT  434

seq1  GCATTACCATTCTATTTCCTCATCCCTAGTTCTGCTTTTTGTATCTACAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTACCATTCTATTTCCTCATCCCTAGTTCTGCTTTTTGTATCTACAC  484

seq1  CTTTCTTCCACATATATATTTAAAGCATGTTTATTTACTTTATATCCCTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCCACATATATATTTAAAGCATGTTTATTTACTTTATATCCCTA  534

seq1  TAAGTTTCTTCAAATCCATTTTGAAAGTAGTTAAGGGAAGCATAAAGAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTCTTCAAATCCATTTTGAAAGTAGTTAAGGGAAGCATAAAGAAA  584

seq1  GGCAATGTTATATATCCATGATGAGGCAGCACTGTACTTGGGTACATGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATGTTATATATCCATGATGAGGCAGCACTGTACTTGGGTACATGAG  634

seq1  AGGAAAGATAAAAGAAGAAAAAAGCAAGAAAAACAGAAAGAAAAAAACCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGATAAAAGAAGAAAAAAGCAAGAAAAACAGAAAGAAAAAAACCA  684

seq1  CCCACATGTTATATAGCCCCTGCCCCCAAGAAACTTTAGGAGTGATGGCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATGTTATATAGCCCCTGCCCCCAAGAAACTTTAGGAGTGATGGCC  734

seq1  CAGAGCTCCATACAAGGCCCCGGTGCCATTGGTTTTTCCCATCTCTGAAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTCCATACAAGGCCCCGGTGCCATTGGTTTTTCCCATCTCTGAAT  784

seq1  TCTGGCTGCACTTAGAGTCAATAACACCCAATTTAACACTTGATATACTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTGCACTTAGAGTCAATAACACCCAATTTAACACTTGATATACTG  834

seq1  CCTGGCACTGTCTGCTTATTGTTTTATGTGGCTAAATGTTGCCCTCTGGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCACTGTCTGCTTATTGTTTTATGTGGCTAAATGTTGCCCTCTGGG  884

seq1  AAGGACCTTGTGTTAACTTTTTCCATCTTCTCATTCTGAAGAGTAGAGGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCTTGTGTTAACTTTTTCCATCTTCTCATTCTGAAGAGTAGAGGG  934

seq1  GATCTGAGATTGATTGATTGACTGATTAATTGAAAATCCAACCATTCTAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGAGATTGATTGATTGACTGATTAATTGAAAATCCAACCATTCTAC  984

seq1  CCAAAAGAATTACCTGGACCCCTTAAAATATAATCTGTGGTGCATATAAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGAATTACCTGGACCCCTTAAAATATAATCTGTGGTGCATATAAC  1034

seq1  CCTTTGATCTGCTTGTCACACAGTGTTGTCTACTGCTCAATTTATCCTTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGATCTGCTTGTCACACAGTGTTGTCTACTGCTCAATTTATCCTTG  1084

seq1  CAGCATGCCAAGGTCTAATGAATTC  1122
      |||||||||||||||||||||||||
seq2  CAGCATGCCAAGGTCTAATGAATTC  1109