BAC Information

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BAC

Clone NameB6Ng01-098M07
Chromosome14 (Build37)
Map Location 110,130,302 - 110,131,320
singlet/doubletsinglet
Overlap genenone
Upstream geneSlitrk1, LOC640892
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098M07.bB6Ng01-098M07.g
ACCDH908762DH908763
length1,2431,010
definitionDH908762|Mus musculus domesticus DNA, BAC clone: B6Ng01-098M07, 5' end.DH908763|Mus musculus domesticus DNA, BAC clone: B6Ng01-098M07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagccccatacctaaacatagtaaaagcaatatacagcaaacca
gtagctaacatcaaactaaatggagagaaacttgaagtaatcccactaaa
atcagggactaaacaatgctgtccactctctccttacttattcaatacag
tactcaatgtcctagccagagcaattagataacagaggtcaaacggatac
aaaaaaggaagaagtcaaaaaatcactgtttgcagatgatatgatagtat
atttacgtgaccccaaaatccaaccagaaaactcttaaagttgataaaca
acttcagcaatgtgactggatataaaattaactcaaacaaagcagtagcc
ttcttctactcaaggataaacagactgagacagaaattagggaaatgaca
atcttctcaattgttcacaattgatataaataaaataccttggtgtgact
ctaaccaagaaagtgaagtatctctatgacaagaacttcaagtctctgaa
gaatgaaatcaaagatctcagaagatggaaagatctttcatgatcatgga
tcggcaggaataatataggaaaaatggctattttgccaaaagcaatgtac
agattcaatgcaatccctatcataattccaactcaattctttatagagtt
agaaagagcaatttgaaaatacatttggaataacaacaaaaataatagga
tattgaaaatattctcaacaataaaagatcttctgaggaatcaccatccc
tgatctcaagaggtattacagagcaatagtgataaatactgcatagtact
ggtacagatacagacaagttgagcaatgaaatagaattgaagacacacac
ctctcatcactttatctttgacaaaggaactaaaaccatccagtggaaaa
atagacagcattttcaataattgatgctggttcaaccggcagtcagcatg
tagaaaatccacatagatccattcttatcttcctgtccaagactaggccc
aagtggatcatgactccacttataccaaatcactcaactaacagaggaca
agtgagaagagctcaaataaagcaaggatcagaacttcatcacagcttta
tgtggctaagaataacattcactatgggacctcagagattgcagctcttg
ttgccagacctgtctatagacaacgctacatggatttgggaaagattctt
acaagctttatcgattagagggattcatctcaattatacaagg
gaattcaaaacctggttcagagctgggtgtggtggcagacacctttactc
ccagcacttgggaggcagaggcaggtgaatttctgagtttgaggccagcc
tggtctacaatgtgagttccaggacagccagggatacacagggaaaccct
gtctcaaaacaaacaaacaaacaaacaaacaaacaaacaaacaaaaccaa
aaaaaaaaaaaaaaaagaaaagaaaagaaaaagaaaacaacctgattcag
ggtcagggttctattaaatcagctctttttggaacaaaaatatgaaataa
ccagtaccggccagaccttttgtctctagttgcatgtgtagcagaggata
acctagtaggccatcaataggaggagagtcctgggtcttgcaaagattat
atgccccagtacagggaaatgccagggccaggaatcatgagagggtgggt
tgtggagcagggcggggagagtgtataggggactttcagagaggaagcta
gaaaaggggatagaatttgaaatgtaaatgaagaaaatatctaataaaaa
ttttcaaatcattaaaaaaatcttgatgataaaattctaagaaaaatatc
acatccatatatatactacaaaaattcatgcattaagtcatcttgtaatt
attaaattataaaccattagcctatgagaaaaaacattaaatgggaccaa
aactatgtatgaaagaaagtaaacatgcataataaaactgtacaataaaa
tgcacaaaaacaatgaatagtaatttatagaaaagtacgtagcaaaacta
attaaaacactacctgagtggccacacagtttcctttccggtgttaacag
aactcaatatctaaacaaatgatgaaagttacatataaattattttttca
agtataatcagaaagaaacttattcccagtgagaaagatgttgaacagtg
atttgtaaagctctttttgggatgctatggtttgtgtgtttgcatgatat
gggtacgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110130302_110131320
seq2: B6Ng01-098M07.g_69_1078 (reverse)

seq1  TATCTGTACCCATATACATGCAAACACACAAAACCATAGACATCCCAAAA  50
      |||| |||||||||| ||||||||||||| ||||||||| ||||||||||
seq2  TATC-GTACCCATAT-CATGCAAACACAC-AAACCATAG-CATCCCAAAA  46

seq1  AGAGCTTTACAAAATCACCTGTTCAACATTCTTTTCTCACTGGGAATTAA  100
      |||||||||| |||||| |||||||||||   |||||||||||||| |||
seq2  AGAGCTTTAC-AAATCA-CTGTTCAACAT--CTTTCTCACTGGGAA-TAA  91

seq1  GTTTTCTTTCTGATTATACTTGAAAAAATAATTTTATATGTAACTTTCAT  150
      | ||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  G-TTTCTTTCTGATTATACTTGAAAAAATAA-TTTATATGTAACTTTCAT  139

seq1  CATTTGTTTAGATATTGAGTTCTTGTTAACA-CGGAAAGG-AACTGTGTG  198
      |||||||||||||||||||||| |||||||| |||||||| |||||||||
seq2  CATTTGTTTAGATATTGAGTTC-TGTTAACACCGGAAAGGAAACTGTGTG  188

seq1  GCCACTCAGGTAGTGTTTTAATTAGTTTTGCTACGTACTTTTCTATAAAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTCAGGTAGTGTTTTAATTAGTTTTGCTACGTACTTTTCTATAAAT  238

seq1  TACTATTCATTGTTTTTGTGCATTTTATTGTACAG-TTTATTATGCATGT  297
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TACTATTCATTGTTTTTGTGCATTTTATTGTACAGTTTTATTATGCATGT  288

seq1  TTACTTTCTTTCATACATAGTTTTGGTCCCATTTAATGTTTTTTCTCATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTCTTTCATACATAGTTTTGGTCCCATTTAATGTTTTTTCTCATA  338

seq1  GGCTAATGGTTTATAATTTAATAATTACAAGATGACTTAATGCATGAATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAATGGTTTATAATTTAATAATTACAAGATGACTTAATGCATGAATT  388

seq1  TTTGTAGTATATATATGGATGTGATATTTTTCTTAGAATTTTATCATCAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGTATATATATGGATGTGATATTTTTCTTAGAATTTTATCATCAA  438

seq1  GATTTTTTTAATGATTTGAAAATTTTTATTAGATATTTTCTTCATTTACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTAATGATTTGAAAATTTTTATTAGATATTTTCTTCATTTACA  488

seq1  TTTCAAATTCTATCCCCTTTTCTAGCTTCCTCTCTGAAAGTCCCCTATAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATTCTATCCCCTTTTCTAGCTTCCTCTCTGAAAGTCCCCTATAC  538

seq1  ACTCTCCCCGCCCTGCTCCACAACCCACCCTCTCATGATTCCTGGCCCTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCCCGCCCTGCTCCACAACCCACCCTCTCATGATTCCTGGCCCTG  588

seq1  GCATTTCCCTGTACTGGGGCATATAATCTTTGCAAGACCCAGGACTCTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCCCTGTACTGGGGCATATAATCTTTGCAAGACCCAGGACTCTCC  638

seq1  TCCTATTGATGGCCTACTAGGTTATCCTCTGCTACACATGCAACTAGAGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTGATGGCCTACTAGGTTATCCTCTGCTACACATGCAACTAGAGA  688

seq1  CAAAAGGTCTGGCCGGTACTGGTTATTTCATATTTTTGTTCCAAAAAGAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGTCTGGCCGGTACTGGTTATTTCATATTTTTGTTCCAAAAAGAG  738

seq1  CTGATTTAATAGAACCCTGACCCTGAATCAGGTTGTTTTCTTTTTCTTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTAATAGAACCCTGACCCTGAATCAGGTTGTTTTCTTTTTCTTTT  788

seq1  CTTTTCTTTTTTTTTTTTTTTTTTGGTTTTGTTTGTTTGTTTGTTTGTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTTTTTTTTTTTTTTTTTGGTTTTGTTTGTTTGTTTGTTTGTTT  838

seq1  GTTTGTTTGTTTGTTTTGAGACAGGGTTTCCCTGTGTATCCCTGGCTGTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTGTTTTGAGACAGGGTTTCCCTGTGTATCCCTGGCTGTC  888

seq1  CTGGAACTCACATTGTAGACCAGGCTGGCCTCAAACTCAGAAATTCACCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTCACATTGTAGACCAGGCTGGCCTCAAACTCAGAAATTCACCT  938

seq1  GCCTCTGCCTCCCAAGTGCTGGGAGTAAAGGTGTCTGCCACCACACCCAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGCCTCCCAAGTGCTGGGAGTAAAGGTGTCTGCCACCACACCCAG  988

seq1  CTCTGAACCAGGTTTTGAATTC  1019
      ||||||||||||||||||||||
seq2  CTCTGAACCAGGTTTTGAATTC  1010