BAC Information

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BAC

Clone NameB6Ng01-098M09
Chromosome14 (Build37)
Map Location 74,195,482 - 74,347,829
singlet/doubletdoublet
Overlap geneLOC100043734
Upstream geneLOC100043721, LOC100043723, LOC668487, LOC668489, Cysltr2, LOC100043149, Rcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2
Downstream geneEG629578, LOC629583, Htr2a, LOC668508, Esd, Lrch1, ENSMUSG00000075519
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098M09.bB6Ng01-098M09.g
ACCDH908764DH908765
length1,1851,088
definitionDH908764|Mus musculus domesticus DNA, BAC clone: B6Ng01-098M09, 5' end.DH908765|Mus musculus domesticus DNA, BAC clone: B6Ng01-098M09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,195,482 - 74,196,679)(74,346,737 - 74,347,829)
sequence
gaattctttgtcaatctcttttggagtttacattagacttgagagatttg
tttaattttacctttccccagagtacactgtcctcagtgttggctaccat
gaaatgatttgctcctctgtgagcaagagcagaccaaagtgctcccaggg
gaaagggggaggcgcagaccttggctgtgaagttttaaagtttcccactc
acaggaaacttctgaaactctaagatgagaaactgcaaggaacattcatc
cacccagctaccgctgctggcctcagacacaaaggcttccaggatttgtt
ctgacagttgatgaatttgaatgtggaatctctacaactagatgtagaat
tttggtcccatgaacatttcaaagaaagttcctggcaatcttgtattagc
atatttaaatatttgcccactttaatttcagtctgtagttgtaggaaggt
ggtaggttatggtttaaaaagcttaggagcaaacatgattgtgaaatgtt
gccaccttattctttacttagaataatttaatccatagacatttttccat
aatgatctaaattatatgtaaattatcctgttcctttggagaactacata
caaaattcttaatgatggccaggtctacaaagagcattcaaattaaaatc
ccaacattttaatgtggtaggagagcaaaagggggaaaacgtcaggagca
tctatgttcttctttaaaaataaatcatcaaattatatatatttatcatg
tgcatcatatatgtagacatagaatggaaaaccaaactaatatatttact
acttgccatagttactatttttttttaaagattcaaggtcattatttatt
gttgctcttaaagactcatttttgactggactcagacttagaagtagaag
ctctcagtgaggacagcctacgtctcttggcaatctgttcctggcgcttt
tctttggcttcttcattctcttggccaaaagtttagcgtattctgcagcc
tccttcttgttcttctagtgcgttgcttcttagaagcatacatcggcgtt
tgggttgcagacacaaggaagtaacagtcctgaatcttggggctttggtc
ctgggcttctaacttctttgttaagggctcttgacgcactacggtacggc
acatctcttctggagagataaaagccttcggattc
gaattcaatcccaaggccagcgggtaaagaatttgatagtacttgagtag
gaagagattctgctgttgttgttctgattaatgaggctagcctatcttct
acaggaaacaataccaattaaaatgttaattgggtcccacaactctttaa
caaacatgtgaaatattgtttgaccaaatacctgagcactctggcccagt
caattgccatatgagtggtcaaagttaacaagtggtgagctttcaaatgt
ttcttgaatctatgatctaccctgagtttcaagggctctaaggatacaca
cagagactgatccttagagagacaattctttcatctagtaaatagatttt
ttttcctcaatcctttgttctttagagagcatagaacaaaggagaaatga
gatgtgcccaagacttgctctcattaaattatagccacttcaaaggtcag
tgtttgggcatttgtgaatccaatgggccatgttagtactgtcatcttac
ctgtccctcctcccagaagacttatgtacagaggatctggaggagctgct
gcttgccaaaaaacgcctcaaatatcccacaacattcctagtcctcaaac
gccattaaaaatacaagcaaagaagtaattcaaggcccataaaacagctc
agtgagtaatttgctttccaccaagcctgacaactgagttcatttctggg
gaccagcaagatgaaaagtgaaactatctattcaggttgttctccagacc
ccacacatatgtcatagattatggcatgtgcttttgtacacatgccacac
acacacacacacacacacacacacacacgaataaatgtataaacaatgaa
gtagtagtttggttcattctcataggaagcaagtttacttctatgtcata
ttctagactgaaagatcacatcttctcttcatcatgcctgataacacaaa
agactccctatattgagtggtgtaaaaactacagaatttcatggttccta
ggtcactgggcccaggtgggtcagccagaatctcctcttgcatttactcc
tgtggatcgatttttccttcttgagccaagccatcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_74195482_74196679
seq2: B6Ng01-098M09.b_48_1232

seq1  GAATTCTTTGTCAATCTCTTTTGGAGTTTACATTAGACTTGAGAGATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTCAATCTCTTTTGGAGTTTACATTAGACTTGAGAGATTTG  50

seq1  TTTAATTTTACCTTTCCCCAGAGTACACTGTCCTCAGTGTTGGCTACCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTACCTTTCCCCAGAGTACACTGTCCTCAGTGTTGGCTACCAT  100

seq1  GAAATGATTTGCTCCTCTGTGAGCAAGAGCAGACCAAAGTGCTCCCAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGATTTGCTCCTCTGTGAGCAAGAGCAGACCAAAGTGCTCCCAGGG  150

seq1  GAAAGGGGGAGGCGCAGACCTTGGCTGTGAAGTTTTAAAGTTTCCCACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGGGAGGCGCAGACCTTGGCTGTGAAGTTTTAAAGTTTCCCACTC  200

seq1  ACAGGAAACTTCTGAAACTCTAAGATGAGAAACTGCAAGGAACATTCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAACTTCTGAAACTCTAAGATGAGAAACTGCAAGGAACATTCATC  250

seq1  CACCCAGCTACCGCTGCTGGCCTCAGACACAAAGGCTTCCAGGATTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGCTACCGCTGCTGGCCTCAGACACAAAGGCTTCCAGGATTTGTT  300

seq1  CTGACAGTTGATGAATTTGAATGTGGAATCTCTACAACTAGATGTAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGTTGATGAATTTGAATGTGGAATCTCTACAACTAGATGTAGAAT  350

seq1  TTTGGTCCCATGAACATTTCAAAGAAAGTTCCTGGCAATCTTGTATTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCCCATGAACATTTCAAAGAAAGTTCCTGGCAATCTTGTATTAGC  400

seq1  ATATTTAAATATTTGCCCACTTTAATTTCAGTCTGTAGTTGTAGGAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAATATTTGCCCACTTTAATTTCAGTCTGTAGTTGTAGGAAGGT  450

seq1  GGTAGGTTATGGTTTAAAAAGCTTAGGAGCAAACATGATTGTGAAATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGTTATGGTTTAAAAAGCTTAGGAGCAAACATGATTGTGAAATGTT  500

seq1  GCCACCTTATTCTTTACTTAGAATAATTTAATCCATAGACATTTTTCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTTATTCTTTACTTAGAATAATTTAATCCATAGACATTTTTCCAT  550

seq1  AATGATCTAAATTATATGTAAATTATCCTGTTCCTTTGGAGAACTACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCTAAATTATATGTAAATTATCCTGTTCCTTTGGAGAACTACATA  600

seq1  CAAAATTCTTAATGATGGCCAGGTCTACAAAGAGCATTCAAATTAAAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTCTTAATGATGGCCAGGTCTACAAAGAGCATTCAAATTAAAATC  650

seq1  CCAACATTTTAATGTGGTAGGAGAGCAAAAGGGGGAAAACGTCAGGAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATTTTAATGTGGTAGGAGAGCAAAAGGGGGAAAACGTCAGGAGCA  700

seq1  TCTATGTTCTTCTTTAAAAATAAATCATCAAATTATATATATTTATCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTTCTTCTTTAAAAATAAATCATCAAATTATATATATTTATCATG  750

seq1  TGCATCATATATGTAGACATAGAATGGAAAACCAAACTAATATATTTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCATATATGTAGACATAGAATGGAAAACCAAACTAATATATTTACT  800

seq1  ACTTGCCATAGTTACTATTTTTTTTTAAAGATTCAAGGTCATTATTTATT  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACTTGCCATAGTTACTATTTTTTTTTAAAGATTCAAGGTCATTATTTA-T  849

seq1  TGTTGCTCTTAAAGACTCATTTTTGACTGGACTCAGACTTAGAAGTAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTCTTAAAGACTCATTTTTGACTGGACTCAGACTTAGAAGTAGAA  899

seq1  GCTCTCAGTGAGGACAGCCTACGTCTCTTGGCAATCTGTTCCTGGCGCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCAGTGAGGACAGCCTACGTCTCTTGGCAATCTGTTCCTGGCGCTT  949

seq1  TTCTTTGGCTTCCTTCATTCTCTTGGCCAAAAGTTTAGCGTATTCTGCAG  1000
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGGCTT-CTTCATTCTCTTGGCCAAAAGTTTAGCGTATTCTGCAG  998

seq1  CCTCCTCCTTGTTCTTCTTAGTGCGTTGCTTCTTCAGAGCAATACATCGG  1050
      |||||| |||||||||| |||||||||||||||| |||   |||||||||
seq2  CCTCCTTCTTGTTCTTC-TAGTGCGTTGCTTCTT-AGAAGCATACATCGG  1046

seq1  CGTTTGTGTTGCAGGACACGAGG-AGTAACAAGTCGCTGAATCTTGGGTG  1099
      |||||| |||||| ||||| ||| |||||| |||| |||||||||||| |
seq2  CGTTTGGGTTGCA-GACACAAGGAAGTAAC-AGTC-CTGAATCTTGGG-G  1092

seq1  CTTTGGTCCTGGGCTTCTTACCTTCTTTGTTTAAGGGCTTCCTGACAGCA  1149
      ||||||||||||||||| || |||||||| |||||||| || |||| |||
seq2  CTTTGGTCCTGGGCTTC-TAACTTCTTTG-TTAAGGGC-TCTTGAC-GCA  1138

seq1  -TACTGGCAGGCATCATCTTCTTTGGAGAGATTAAAAAGCTTTCGGATTC  1198
       ||| |   |||| |||||  | |||||||||  |||||| |||||||||
seq2  CTACGGTACGGCA-CATCTCTTCTGGAGAGAT--AAAAGCCTTCGGATTC  1185

seq1: chr14_74346737_74347829
seq2: B6Ng01-098M09.g_69_1156 (reverse)

seq1  AATGAT-GCTTGGCTCAAGAAGGAAAAATCGATCCACAGGAGTAAATGCT  49
      |||||| |||||||||||||||||||||||||||||||||||||||||| 
seq2  AATGATGGCTTGGCTCAAGAAGGAAAAATCGATCCACAGGAGTAAATGC-  49

seq1  AATGAGAGATTCTTGCTGACCCACCCTGGGCCCAGTGACCTAGGAACCAT  99
      ||   |||||||| ||||||||| ||||||||||||||||||||||||||
seq2  AAGAGGAGATTCTGGCTGACCCA-CCTGGGCCCAGTGACCTAGGAACCAT  98

seq1  TGAAATCTGTAGTTTTTAACACACTCAATATAGGGAGTCTTTTGTGTTAT  149
        || |||||||||||||   |||||||||||||||||||||||||||||
seq2  GAAATTCTGTAGTTTTTACACCACTCAATATAGGGAGTCTTTTGTGTTAT  148

seq1  CAGGCAATGATGAAGAGAAAGATGTGATCTTTCAGTCTAGAATATGGACA  199
      ||||| ||||||||||| ||||||||||||||||||||||||||| ||||
seq2  CAGGC-ATGATGAAGAG-AAGATGTGATCTTTCAGTCTAGAATAT-GACA  195

seq1  TAGAAGTAAACTTGCTTCCTATGAGAATGAACCAAACTACTACTTCATTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTAAACTTGCTTCCTATGAGAATGAACCAAACTACTACTTCATTG  245

seq1  TTTTATACATTTATTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGG  299
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTATACATTTATTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGG  294

seq1  CATGTGTACAAAAGCACATGCCATAATCTATGACATATGTGTGGGGTCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTACAAAAGCACATGCCATAATCTATGACATATGTGTGGGGTCTG  344

seq1  GAGAACAACCTGAATAGATAGTTTCACTTTTCATCTTGCTGGTCCCCAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACAACCTGAATAGATAGTTTCACTTTTCATCTTGCTGGTCCCCAGA  394

seq1  AATGAACTCAGTTGTCAGGCTTGGTGGAAAGCAAATTACTCACTGAGCTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACTCAGTTGTCAGGCTTGGTGGAAAGCAAATTACTCACTGAGCTG  444

seq1  TTTTATGGGCCTTGAATTACTTCTTTGCTTGTATTTTTAATGGCGTTTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGGGCCTTGAATTACTTCTTTGCTTGTATTTTTAATGGCGTTTGA  494

seq1  GGACTAGGAATGTTGTGGGATATTTGAGGCGTTTTTTGGCAAGCAGCAGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAGGAATGTTGTGGGATATTTGAGGCGTTTTTTGGCAAGCAGCAGC  544

seq1  TCCTCCAGATCCTCTGTACATAAGTCTTCTGGGAGGAGGGACAGGTAAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAGATCCTCTGTACATAAGTCTTCTGGGAGGAGGGACAGGTAAGA  594

seq1  TGACAGTACTAACATGGCCCATTGGATTCACAAATGCCCAAACACTGACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTACTAACATGGCCCATTGGATTCACAAATGCCCAAACACTGACC  644

seq1  TTTGAAGTGGCTATAATTTAATGAGAGCAAGTCTTGGGCACATCTCATTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGTGGCTATAATTTAATGAGAGCAAGTCTTGGGCACATCTCATTT  694

seq1  CTCCTTTGTTCTATGCTCTCTAAAGAACAAAGGATTGAGGAAAAAAAATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTGTTCTATGCTCTCTAAAGAACAAAGGATTGAGGAAAAAAAATC  744

seq1  TATTTACTAGATGAAAGAATTGTCTCTCTAAGGATCAGTCTCTGTGTGTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTAGATGAAAGAATTGTCTCTCTAAGGATCAGTCTCTGTGTGTA  794

seq1  TCCTTAGAGCCCTTGAAACTCAGGGTAGATCATAGATTCAAGAAACATTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGAGCCCTTGAAACTCAGGGTAGATCATAGATTCAAGAAACATTT  844

seq1  GAAAGCTCACCACTTGTTAACTTTGACCACTCATATGGCAATTGACTGGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTCACCACTTGTTAACTTTGACCACTCATATGGCAATTGACTGGG  894

seq1  CCAGAGTGCTCAGGTATTTGGTCAAACAATATTTCACATGTTTGTTAAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTGCTCAGGTATTTGGTCAAACAATATTTCACATGTTTGTTAAAG  944

seq1  AGTTGTGGGACCCAATTAACATTTTAATTGGTATTGTTTCCTGTAGAAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGGGACCCAATTAACATTTTAATTGGTATTGTTTCCTGTAGAAGA  994

seq1  TAGGCTAGCCTCATTAATCAGAACAACAACAGCAGAATCTCTTCCTACTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTAGCCTCATTAATCAGAACAACAACAGCAGAATCTCTTCCTACTC  1044

seq1  AAGTACTATCAAATTCTTTACCCGCTGGCCTTGGGATTGAATTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTATCAAATTCTTTACCCGCTGGCCTTGGGATTGAATTC  1088