BAC Information

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BAC

Clone NameB6Ng01-099E01
Chromosome14 (Build37)
Map Location 85,509,361 - 85,510,347
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043280, LOC100043285, Pcdh17, 9630013A20Rik, LOC629794
Downstream geneLOC668603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099E01.bB6Ng01-099E01.g
ACCDH909098DH909099
length9841,158
definitionDH909098|Mus musculus domesticus DNA, BAC clone: B6Ng01-099E01, 5' end.DH909099|Mus musculus domesticus DNA, BAC clone: B6Ng01-099E01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccatggtggtagaattccgccatgactccatgggggtactggg
ctgtactaggccacattttgggtccattactgaaacacctgaggtctggg
gaacaaaaggacacctttggctcaggtctggcctcatcccttgcctgggc
atattgagagctagtcctgtagtcttaagagtaggagagctgaactcaca
gctagccagctgcagctgtgagagaggagaggagaactgaattgagccca
taatcatcagagtgggagatctgggccctggctcttgcagctgaggcttt
gaatgagccagccagggtaggaaagaagagcttgcctcagaagtctaggt
gcaggacagctggtgagcaaacaagctcagatacagctcaggctcaggtc
cactccaacacctaccccattggtgaattgctggagcgtgtaaaggggcc
tgcctactggtccaaaactacagaatctctgtgaaaaagggcaacaacaa
gatatttgagaggcatttcagtgaagtttcacaaatgatactgtagcaga
agccggagactttgaatcagaccaaacactgtttgcaatgaacatttgca
aggaaaacagagtgggaacaaaaggaaaagtgtgggacacagtgtgacac
actgaagattccatgataaaggttttttgtttgtttgtttgtttgtttgt
ttgttttatttcttttttctcttttggggaggaggtagaaagagtgcaac
atgggaggttgcatgatgtgcaattcacaaagaaccactgaaatttttaa
agagaaaaataacactagaattcaggggtaaatatcaatgttaacttttc
tgtaaaaatattctaagattttctttctctgaaagtgactataagataat
aatttgaaaataaattaaaaagaaatagttgatatatgagatttctgatt
tcattttctcctcctaaatactccaagtgtctca
gaattctcacctgaggaataccgaatggtagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccgctctggaaatcagtctggcggttcttca
gaaaactgaacatagtactaccggaggatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagatgaacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggttacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacacgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcataccctagcaagattttattgaaa
ggacccagatgtagctatctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatgggatggatcacagggctcca
atgagagctagagaaagaacccaagagctaaagggatctgcaccccatag
gtggaacaacattatgactaacagtaccccggagctctttactctagctg
catatgtaacaaagatggctaatcgcatcctgaagagaggtcattgaagg
tacttgtatgccagtacagggtacgccaggacaaaaggggagatgtggtg
tagagaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_85509361_85510347
seq2: B6Ng01-099E01.b_47_1030

seq1  GAATTCACCATGGTGGTAGAATTCCGCCATGACTCCATGGGGGTACTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATGGTGGTAGAATTCCGCCATGACTCCATGGGGGTACTGGG  50

seq1  CTGTACTAGGCCACATTTTGGGTCCATTACTGAAACACCTGAGGTCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTAGGCCACATTTTGGGTCCATTACTGAAACACCTGAGGTCTGGG  100

seq1  GAACAAAAGGACACCTTTGGCTCAGGTCTGGCCTCATCCCTTGCCTGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAAGGACACCTTTGGCTCAGGTCTGGCCTCATCCCTTGCCTGGGC  150

seq1  ATATTGAGAGCTAGTCCTGTAGTCTTAAGAGTAGGAGAGCTGAACTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAGAGCTAGTCCTGTAGTCTTAAGAGTAGGAGAGCTGAACTCACA  200

seq1  GCTAGCCAGCTGCAGCTGTGAGAGAGGAGAGGAGAACTGAATTGAGCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCCAGCTGCAGCTGTGAGAGAGGAGAGGAGAACTGAATTGAGCCCA  250

seq1  TAATCATCAGAGTGGGAGATCTGGGCCCTGGCTCTTGCAGCTGAGGCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATCAGAGTGGGAGATCTGGGCCCTGGCTCTTGCAGCTGAGGCTTT  300

seq1  GAATGAGCCAGCCAGGGTAGGAAAGAAGAGCTTGCCTCAGAAGTCTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGCCAGCCAGGGTAGGAAAGAAGAGCTTGCCTCAGAAGTCTAGGT  350

seq1  GCAGGACAGCTGGTGAGCAAACAAGCTCAGATACAGCTCAGGCTCAGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGACAGCTGGTGAGCAAACAAGCTCAGATACAGCTCAGGCTCAGGTC  400

seq1  CACTCCAACACCTACCCCATTGGTGAATTGCTGGAGCGTGTAAAGGGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCAACACCTACCCCATTGGTGAATTGCTGGAGCGTGTAAAGGGGCC  450

seq1  TGCCTACTGGTCCAAAACTACAGAATCTCTGTGAAAAAGGGCAACAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACTGGTCCAAAACTACAGAATCTCTGTGAAAAAGGGCAACAACAA  500

seq1  GATATTTGAGAGGCATTTCAGTGAAGTTTCACAAATGATACTGTAGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTGAGAGGCATTTCAGTGAAGTTTCACAAATGATACTGTAGCAGA  550

seq1  AGCCGGAGACTTTGAATCAGACCAAACACTGTTTGCAATGAACATTTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGAGACTTTGAATCAGACCAAACACTGTTTGCAATGAACATTTGCA  600

seq1  AGGAAAACAGAGTGGGAACAAAAGGAAAAGTGTGGGACACAGTGTGACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAACAGAGTGGGAACAAAAGGAAAAGTGTGGGACACAGTGTGACAC  650

seq1  ACTGAAGATTCCATGATAAAGGTTTTTTGTTTGTTTGTTTGTTTGTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGATTCCATGATAAAGGTTTTTTGTTTGTTTGTTTGTTTGTTTGT  700

seq1  TTGTTTTATTTCTTTTTTCTCTTTTGGGGAGGAGGTAGAAAGAGTGCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTATTTCTTTTTTCTCTTTTGGGGAGGAGGTAGAAAGAGTGCAAC  750

seq1  ATGGGAGG-TGCATGATGTGCAATTCACAAAGAACCACTGAAATTTTTAA  799
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGGTTGCATGATGTGCAATTCACAAAGAACCACTGAAATTTTTAA  800

seq1  AGAGAAAAATAACACTAGAATTCAGGGGTAAAATATCAATGTTAACTTTA  849
      ||||||||||||||||||||||||||||| ||||||||||||||||||| 
seq2  AGAGAAAAATAACACTAGAATTCAGGGGT-AAATATCAATGTTAACTTTT  849

seq1  CTGTAAAAATATTCTAAGATTTTCTTTCTCTGAAAGTGACTATAAAGATA  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGTAAAAATATTCTAAGATTTTCTTTCTCTGAAAGTGACTAT-AAGATA  898

seq1  ATATTTTGAAAATAAAATTAAAAAGAAAATAGTTGATATATGAGATTTCT  949
      ||| ||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  ATAATTTGAAAAT-AAATTAAAAAG-AAATAGTTGATATATGAGATTTCT  946

seq1  GATTTCATTTTCTCCTCCTAAATACTCCAAGTGTCTCA  987
      ||||||||||||||||||||||||||||||||||||||
seq2  GATTTCATTTTCTCCTCCTAAATACTCCAAGTGTCTCA  984