BAC Information

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BAC

Clone NameB6Ng01-101J20
Chromosome14 (Build37)
Map Location 105,754,786 - 105,932,798
singlet/doubletdoublet
Overlap genenone
Upstream genePou4f1, 2610206B13Rik, D130009I18Rik, LOC435420, Rbm26, LOC621103, LOC100043466, Ndfip2
Downstream geneLOC620376, LOC100043469, Spry2, EG621364, LOC212084, Trim52, LOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101J20.bB6Ng01-101J20.g
ACCDH910743DH910744
length1,147205
definitionDH910743|Mus musculus domesticus DNA, BAC clone: B6Ng01-101J20, 5' end.DH910744|Mus musculus domesticus DNA, BAC clone: B6Ng01-101J20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,931,623 - 105,932,798)(105,754,786 - 105,754,990)
sequence
gaattcagaaaatgtcgttattactggatctgaagaaagaaaccacatct
acctctggaaataacctgtgatgaaaatacattagtaagaggcacagaag
ccatggtggttaaaattaaagttcagactgttgtttgttttattcttttg
aggatcttctctacattactaagcaagctctctaccactgagctccatcc
cagcctttaaggttaggctttgaagtcgataacaaattataattaaggtg
gacttttggttttatctttgggggctgggctgacatttgtacattggtgt
gctgtgtgcacattactgccacaagcactgtacctgaacctacagaaatc
accatgaaaaaggacttttcggttggcgtgaaaatgatggaagttaggtt
ctactgagaaggctcagcatgtgaaggcatttgccacataaacccgggga
cctgaggtggattcccccaaaccaacttcacagtgttgtcctctgccccg
ccccccccccacacacacacactgtgggctgggtcataaacacctttttc
tcaatattatgtgtacatgtagtcaatggttctgcaaaagaatggtaatt
actttctagcagtctcacaagcatgatgtttcaaagttgaattgtatcat
atattgctgctccgtgctaactaccatcctagtgtataaaatacactgtt
tcgtgtactctcctcacttgcacagtccaattcccttccaccatcccagc
tcagcacagggaaaaggcgggcacacagcttttgctccgaggctttgcag
cccccaagtcaagaacctgcaagctcagaaaacacagagagaagcttccc
tttaaacttgaggctctttgccccccactcccatctccattatctccgaa
tccaggtacatctgtagcaagaattttgttctctggaacccgcagcagta
ttcctctcgtctctatggagacagctctatcaacttttgaagaacttgcc
tgtatgtaaacaacctctctgcaatgcctgtttcttctttcatctcattc
tgctcaagcctcgctccaaaaagaaatagttgcagtgtgtactttttctt
cttgaacaacttggtgttctgaaagaggtgatcttggaactaactcc
cagtttatgcaggagttggtatggaagttctcctctatcatggagaagca
atggtgaacagtgaatcctcaattttactatcatggtgatgggagtactt
tttattaggggagtcagggagtgggagagatgggttgttaagtcccttgg
agctggagttataggtctcttctcttctcttctcttctcttctcttctct
tatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_105931623_105932798
seq2: B6Ng01-101J20.b_47_1193 (reverse)

seq1  GGAGTTTAGTCTCCAAGATCCACCTCTTTCAGAA-ACAAAGGGGGAGGGT  49
      |||| ||||| |||||||| |||||||||||||| || ||       | |
seq2  GGAG-TTAGT-TCCAAGAT-CACCTCTTTCAGAACACCAA-------GTT  40

seq1  AGTCGAGAGAGAAAAAGTACACACCTGCAACCTATTTCTTTTTGAAGCGA  99
        || ||| |||||||||||||| |||||| ||||||||||||| |||||
seq2  GTTCAAGA-AGAAAAAGTACACA-CTGCAA-CTATTTCTTTTTGGAGCGA  87

seq1  AGCCTTTGAGCAGATGGAAGATGAGATAGGAAAAGAAAACAGGCCAATTG  149
       ||  |||||||||      ||||||| | || |  ||||||||  ||||
seq2  GGC--TTGAGCAGA------ATGAGAT-GAAAGAAGAAACAGGC--ATTG  126

seq1  CCAAGAGAGGTTTGTTTACAATACAGGCAAGTTCCTTCAAAAGTTGATAG  199
      |  ||||||| |||||||| ||||||||||||| ||||||||||||||| 
seq2  C--AGAGAGG-TTGTTTAC-ATACAGGCAAGTT-CTTCAAAAGTTGATA-  170

seq1  GAGCTGTCTCCATAGAGACGAGGGGAAATACTGCTGCGGGGTTCCAGAGA  249
      |||||||||||||||||||||| || ||||||||||| ||||||||||||
seq2  GAGCTGTCTCCATAGAGACGAGAGG-AATACTGCTGC-GGGTTCCAGAGA  218

seq1  AC-AGATTCCTGCTACAGATGTACCTGGATTCGGAGATAATGGAGATGGG  298
      || | |||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATTCTTGCTACAGATGTACCTGGATTCGGAGATAATGGAGATGGG  268

seq1  AGT-GGGGGCAAAGAGCCTCAAGTTTAAAGGGAAGCTTCTCTCTGTGTTT  347
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGGGCAAAGAGCCTCAAGTTTAAAGGGAAGCTTCTCTCTGTGTTT  318

seq1  TCTGAGCTTGCAGGTTCTTGACTTGGGGGCTGCAAAGCCTCGGAGCAAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCTTGCAGGTTCTTGACTTGGGGGCTGCAAAGCCTCGGAGCAAAA  368

seq1  GCTGTGTGCCCGCCTTTTCCCTGTGCTGAGCTGGGATGGTGGAAGGGAAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTGCCCGCCTTTTCCCTGTGCTGAGCTGGGATGGTGGAAGGGAAT  418

seq1  TGGACTGTGCAAGTGAGGAGAGTACACGAAACAGTGTATTTTATACACTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGTGCAAGTGAGGAGAGTACACGAAACAGTGTATTTTATACACTA  468

seq1  GGATGGTAGTTAGCACGGAGCAGCAATATATGATACAATTCAACTTTGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTAGTTAGCACGGAGCAGCAATATATGATACAATTCAACTTTGAA  518

seq1  ACATCATGCTTGTGAGACTGCTAGAAAGTAATTACCATTCTTTTGCAGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATGCTTGTGAGACTGCTAGAAAGTAATTACCATTCTTTTGCAGAA  568

seq1  CCATTGACTACATGTACACATAATATTGAGAAAAAGGTGTTTATGACCCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGACTACATGTACACATAATATTGAGAAAAAGGTGTTTATGACCCA  618

seq1  GCCCACAGTGTGTGTGTGTGGGGGGGGGGCGGGGCAGAGGACAACACTGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACAGTGTGTGTGTGTGGGGGGGGGGCGGGGCAGAGGACAACACTGT  668

seq1  GAAGTTGGTTTGGGGGAATCCACCTCAGGTCCCCGGGTTTATGTGGCAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGGTTTGGGGGAATCCACCTCAGGTCCCCGGGTTTATGTGGCAAA  718

seq1  TGCCTTCACATGCTGAGCCTTCTCAGTAGAACCTAACTTCCATCATTTTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCACATGCTGAGCCTTCTCAGTAGAACCTAACTTCCATCATTTTC  768

seq1  ACGCCAACCGAAAAGTCCTTTTTCATGGTGATTTCTGTAGGTTCAGGTAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCAACCGAAAAGTCCTTTTTCATGGTGATTTCTGTAGGTTCAGGTAC  818

seq1  AGTGCTTGTGGCAGTAATGTGCACACAGCACACCAATGTACAAATGTCAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTGTGGCAGTAATGTGCACACAGCACACCAATGTACAAATGTCAG  868

seq1  CCCAGCCCCCAAAGATAAAACCAAAAGTCCACCTTAATTATAATTTGTTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCCCCAAAGATAAAACCAAAAGTCCACCTTAATTATAATTTGTTA  918

seq1  TCGACTTCAAAGCCTAACCTTAAAGGCTGGGATGGAGCTCAGTGGTAGAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACTTCAAAGCCTAACCTTAAAGGCTGGGATGGAGCTCAGTGGTAGAG  968

seq1  AGCTTGCTTAGTAATGTAGAGAAGATCCTCAAAAGAATAAAACAAACAAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCTTAGTAATGTAGAGAAGATCCTCAAAAGAATAAAACAAACAAC  1018

seq1  AGTCTGAACTTTAATTTTAACCACCATGGCTTCTGTGCCTCTTACTAATG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAACTTTAATTTTAACCACCATGGCTTCTGTGCCTCTTACTAATG  1068

seq1  TATTTTCATCACAGGTTATTTCCAGAGGTAGATGTGGTTTCTTTCTTCAG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCATCACAGGTTATTTCCAGAGGTAGATGTGGTTTCTTTCTTCAG  1118

seq1  ATCCAGTAATAACGACATTTTCTGAATTC  1176
      |||||||||||||||||||||||||||||
seq2  ATCCAGTAATAACGACATTTTCTGAATTC  1147

seq1: chr14_105754786_105754990
seq2: B6Ng01-101J20.g_76_280

seq1  CAGTTTATGCAGGAGTTGGTATGGAAGTTCTCCTCTATCATGGAGAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTATGCAGGAGTTGGTATGGAAGTTCTCCTCTATCATGGAGAAGCA  50

seq1  ATGGTGAACAGTGAATCCTCAATTTTACTATCATGGTGATGGGAGTACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAACAGTGAATCCTCAATTTTACTATCATGGTGATGGGAGTACTT  100

seq1  TTTATTAGGGGAGTCAGGGAGTGGGAGAGATGGGTTGTTAAGTCCCTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGGGGAGTCAGGGAGTGGGAGAGATGGGTTGTTAAGTCCCTTGG  150

seq1  AGCTGGAGTTATAGGTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAGTTATAGGTCTCTTCTCTTCTCTTCTCTTCTCTTCTCTTCTCT  200

seq1  TCTCT  205
      | |||
seq2  TATCT  205