BAC Information

Click to search

BAC

Clone NameB6Ng01-102F04
Chromosome14 (Build37)
Map Location 112,427,824 - 112,547,987
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043494, Slitrk5, LOC100043501
Downstream geneEG223186, LOC100043509
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102F04.bB6Ng01-102F04.g
ACCDH911248DH911249
length949925
definitionDH911248|Mus musculus domesticus DNA, BAC clone: B6Ng01-102F04, 5' end.DH911249|Mus musculus domesticus DNA, BAC clone: B6Ng01-102F04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,547,062 - 112,547,987)(112,427,824 - 112,428,755)
sequence
gaattctcttctgtgctttctttcaggagtgtaaaattcctgtggattca
caagacgggaaaataaaacggatgaggggcatagcgagagggagctctgg
agaaggaccggagtgctgtgtatgaacggtgaaatggaaaaatggaaggg
gcacttaactcgggtgaagggagggatggccaatgacggaatatgggaag
atccataacactaagactgtttaccaacgttcatacatatttctttaaac
ttaatgctaaactaaccatttcctcacctgaagtaatttctgacccaatg
tagttttcggtcatgactacaaaaacatataaaccacatgcattcttggc
tctcaactgcacatataacagcttatgtttatacagatcatgattaaatt
tattgtaaaattcaaccaaagtttgcaaatctctttaagcttctccccat
ttggtctccagcatgtattgtgaaatttaggcccctcatttgattttgta
gaaacatatttattcccagtacacaaaagtaaacattggcatggggcaag
gagagaacccaatggacaaatcatttgcaaagcaagtgcatggactagag
acacaataatggggagcagactgcagtaatgttcatctatcatttcagct
tgcttatggcgatatagacgatagaaccggtataacccacagaagttcat
ggtgcaggaaccgaggtagacctctggtctacacattttcactgtagcaa
aaatccatgccctcctctacacaaatacgtcagactctacgttcaaaaca
gaaatcttaccaatgatatatgaacctgagccatgtctgctcgtgtgcac
accctttctctttcttagaactcaggaatactcacctatacggggaggta
atgtattcgtgtcacagaacagtgtacgagcctacgtaaagcctccaga
gaattctctgtgccgggaactcttctgggtgctgaaaattttaatgagaa
atgcacaaaacacatttatctccaagaggttaccgcctagagaaaaagaa
aaattcttactcctatgtaaagtagagaaggatacacttcctatgaggga
aaaaaataacctttacgcggaacaagagaaccaaagtaatcatgaacttg
gagttcaaagccaaagaaaacaagttaccatggaggcttacttcatttct
aaaatgtgaaatgaactgaggaatacatttaatgtgggcactgaaaagag
agggatgacctggagcctaccccaagggtcattacttcacgttggccttg
cgggaacgttttaacttatccatagggcacaggagctctaaaaacgctat
ccagcactccgaggcttccattttaatacatgctttggttcaagccatcg
gagtagaccaaaaccataaaatataatgggaaaactaacaaaatatgtat
agaagtaatgatgtggggcgatttattgatatgcgcaacgattgctagca
tctctcatcaggaaaaacaatctatatttaagcacttatatcttatagac
gaagaaatacatgcatttcttgagaaattagtaattggcacaaaaacaat
cacaaaggcctcctgatcacaactacaattattgaactataggactccta
tagactctcagctcttttacacaatctgaatgcgaccggggggggggggc
aaagaacgaatgcactactctacagaaatcgatatgggattatgatttca
gtgccttcaccaatctgcttcagagacttgacatacagattagaaagtcg
ggagctgtgaacagaagccctaatgacttcgatctattcgtactcacgaa
agcctcatggaagaagggaaactgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_112547062_112547987
seq2: B6Ng01-102F04.b_67_989 (reverse)

seq1  TCTGGAGGCTTTACGTATGCTTGTACACTCTTCACTGACAGGAATACAGA  50
      ||||||||||||||||| ||| ||||||| |||  ||||| |||||||  
seq2  TCTGGAGGCTTTACGTAGGCTCGTACACTGTTCTGTGACACGAATACATT  50

seq1  ACTTCCACAAATAGGTGAGTATTTCCGAGTTCTAAGAAAGATAAAGGGTG  100
      || ||| |  ||||||||||||| | ||||||||||||||| ||||||||
seq2  ACCTCCCCGTATAGGTGAGTATTCCTGAGTTCTAAGAAAGAGAAAGGGTG  100

seq1  TGAACACGAGCAGACATGGCTCAGGTTCATAAAACATTGGTAAAAATTTT  150
      || |||||||||||||||||||||||||||| | ||||||||| | || |
seq2  TGCACACGAGCAGACATGGCTCAGGTTCATATATCATTGGTAAGATTTCT  150

seq1  AATTTGAATGTACTGTATGACGTATTTGTGTAGAGGAGGGCATGGATTTT  200
        |||||| |||  || |||||||||||||||||||||||||||||||||
seq2  GTTTTGAACGTAGAGTCTGACGTATTTGTGTAGAGGAGGGCATGGATTTT  200

seq1  TGCCACAGTGAAAATGTGTAGACCAGAGGTCAACCTTGGTTCCTGTACCA  250
      ||| ||||||||||||||||||||||||||| |||| |||||||| ||||
seq2  TGCTACAGTGAAAATGTGTAGACCAGAGGTCTACCTCGGTTCCTGCACCA  250

seq1  TGAACTTCTGTGGGTTCTACTGTTTCTATTGTCTATATCACCATAAGCAA  300
      |||||||||||||||| ||| | |||||| ||||||||| ||||||||||
seq2  TGAACTTCTGTGGGTTATACCGGTTCTATCGTCTATATCGCCATAAGCAA  300

seq1  GCTGAAATGATAGATGAACACTACTGCAGTCTGCTTGCCATTTTTGTGTC  350
      |||||||||||||||||||| ||||||||||||||  ||||| |||||||
seq2  GCTGAAATGATAGATGAACATTACTGCAGTCTGCTCCCCATTATTGTGTC  350

seq1  TCTTGTCCATGCACTTGCTTTGCAAATGATTTGTCCATTGGGTTCTCTCC  400
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTCCATGCACTTGCTTTGCAAATGATTTGTCCATTGGGTTCTCTCC  400

seq1  TTACCCCATGCCAATGTTTACTTTTGTGTACTGCGAATAAATATGTTTCT  450
      || |||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTGCCCCATGCCAATGTTTACTTTTGTGTACTGGGAATAAATATGTTTCT  450

seq1  ACAAAATCAAATGAGGGGCCTAAATTTCACAATACATGCTGGAGACCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATCAAATGAGGGGCCTAAATTTCACAATACATGCTGGAGACCAAA  500

seq1  TGGGGAGAAGCTTAAAGAGATTTGCAAACTTTGGTTGAATTTTACAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGAAGCTTAAAGAGATTTGCAAACTTTGGTTGAATTTTACAATAA  550

seq1  ATTTAATCATGATCTGTATAAACTGTAAGCTGTTATATGTGCAGTTGACT  600
      |||||||||||||||||||||||  |||||||||||||||||||||||  
seq2  ATTTAATCATGATCTGTATAAAC-ATAAGCTGTTATATGTGCAGTTGAGA  599

seq1  GTATAGAATGCATGTGGTTTATATGTTTTTGTAGTCATTACCAAAAACTA  650
      |   |||||||||||||||||||||||||||||||||| ||| |||||||
seq2  GCCAAGAATGCATGTGGTTTATATGTTTTTGTAGTCATGACCGAAAACTA  649

seq1  CATTTGCTAAGAAATTACTTCTGGTGAGGAAATGTTTAGTTTATTATTAA  700
      |||| | | |||||||||||| |||||||||||| ||||||||  |||||
seq2  CATTGGGTCAGAAATTACTTCAGGTGAGGAAATGGTTAGTTTAGCATTAA  699

seq1  GTTTAAAGAAATATGTATGAACGTTTGTAAACAGTCTTAGTGTTATTGAT  750
      ||||||||||||||||||||||||| |||||||||||||||||||| |||
seq2  GTTTAAAGAAATATGTATGAACGTTGGTAAACAGTCTTAGTGTTATGGAT  749

seq1  CTTCCCATATTCTGTCATTGGCCATCCCTCCCTTCACCCGAGTTAAGTGC  800
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTTCCCATATTCCGTCATTGGCCATCCCTCCCTTCACCCGAGTTAAGTGC  799

seq1  CCCTTCCATTTTTCCATTTCACTGTTCATACACAGCACTCCTGTCCTTCA  850
      |||||||||||||||||||||| |||||||||||||||||| ||||||| 
seq2  CCCTTCCATTTTTCCATTTCACCGTTCATACACAGCACTCCGGTCCTTCT  849

seq1  CCAGAGCTCCCTCTCGCTATGCCCATCATCCATTTTATTTTCCTTGTCTT  900
      |||||||||||||||||||||||| |||||| |||||||||||  |||||
seq2  CCAGAGCTCCCTCTCGCTATGCCCCTCATCCGTTTTATTTTCC-CGTCTT  898

seq1  GTGAATGCATTGGAATTTATACACTC  926
      |||||| ||  ||||||| |||||||
seq2  GTGAATCCACAGGAATTT-TACACTC  923

seq1: chr14_112427824_112428755
seq2: B6Ng01-102F04.g_65_989

seq1  GAATTCAATGTGCCAGGAACTCTTCGAGGTGCTGAAAATATTAATGTGAA  50
      ||||||  |||||| ||||||||||  |||||||||||| |||||| |||
seq2  GAATTCTCTGTGCCGGGAACTCTTCTGGGTGCTGAAAATTTTAATGAGAA  50

seq1  ATGCAGAAAACACATTTATCTCCAGGAGGTTACAGCCTAGAGAAAAAGAA  100
      ||||| |||||||||||||||||| |||||||| ||||||||||||||||
seq2  ATGCACAAAACACATTTATCTCCAAGAGGTTACCGCCTAGAGAAAAAGAA  100

seq1  AAATTAGTACTCCTATGTAGAGTAGAGAAGGATACACATCCTATTTGGGA  150
      |||||  |||||||||||| ||||||||||||||||| ||||||  ||||
seq2  AAATTCTTACTCCTATGTAAAGTAGAGAAGGATACACTTCCTATGAGGGA  150

seq1  AAAAAATAACCTTTACACGAAACAAGAGAGCTAAAGTAATCATGAACTTG  200
      |||||||||||||||| || ||||||||| | ||||||||||||||||||
seq2  AAAAAATAACCTTTACGCGGAACAAGAGAACCAAAGTAATCATGAACTTG  200

seq1  GAGTTCAAAGCCAAAGAAGACAAGTTACCATGTAGGCTTACTTCATTTCT  250
      |||||||||||||||||| ||||||||||||| |||||||||||||||||
seq2  GAGTTCAAAGCCAAAGAAAACAAGTTACCATGGAGGCTTACTTCATTTCT  250

seq1  AAAATGTGAAATGAACTGAGGAATAGATTTAATGTGGGCACTGAAAAGAG  300
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAAATGTGAAATGAACTGAGGAATACATTTAATGTGGGCACTGAAAAGAG  300

seq1  AGGGATGACCTGGAGCATAGCCAAAGGGTCATTACTTCACGTTGTCATTG  350
      |||||||||||||||| || || ||||||||||||||||||||| | |||
seq2  AGGGATGACCTGGAGCCTACCCCAAGGGTCATTACTTCACGTTGGCCTTG  350

seq1  CGGGAACATTTTAACTTATCCATAGGGCACAGGAGCTCTAAAAAGGCTAG  400
      ||||||| |||||||||||||||||||||||||||||||||||| |||| 
seq2  CGGGAACGTTTTAACTTATCCATAGGGCACAGGAGCTCTAAAAACGCTAT  400

seq1  CTAGCAGTCCGAGGCTTCCATTTTAATACATACTTTGGTTCATGCAATCT  450
      | |||| |||||||||||||||||||||||| |||||||||| || ||| 
seq2  CCAGCACTCCGAGGCTTCCATTTTAATACATGCTTTGGTTCAAGCCATCG  450

seq1  GAGTAGACAAAAAGCATAAAATATAATAGGAAAACTAACAAAATATGTTT  500
      |||||||| |||| ||||||||||||| |||||||||||||||||||| |
seq2  GAGTAGACCAAAACCATAAAATATAATGGGAAAACTAACAAAATATGTAT  500

seq1  AGAAGTAATGATATGTAGTGATTTATTGATATGCACAATGATTGTTAGCA  550
      |||||||||||| ||  | ||||||||||||||| ||| ||||| |||||
seq2  AGAAGTAATGATGTGGGGCGATTTATTGATATGCGCAACGATTGCTAGCA  550

seq1  TCTCTCATAAGGAAAAACAATCTATATTTAAGCACTTATATCTTATAGAC  600
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATCAGGAAAAACAATCTATATTTAAGCACTTATATCTTATAGAC  600

seq1  GAAGAAATACATGCATTTCTTGAGAAATTAGTAATTGGCACAAAAACAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GAAGAAATACATGCATTTCTTGAGAAATTAGTAATTGGCACAAAAACAAT  650

seq1  CACAAAGGCCTCCTGATCAGAACTACAATTATTTCACTATAGGACTCCTA  700
      ||||||||||||||||||| |||||||||||||  |||||||||||||||
seq2  CACAAAGGCCTCCTGATCACAACTACAATTATTGAACTATAGGACTCCTA  700

seq1  TAGAATTTCAGCTCTTTTACACAATCTGATTGCATCCGGGGGGGGGGGGC  750
      |||| | |||||||||||||||||||||| |||  |||||||||||||||
seq2  TAGACTCTCAGCTCTTTTACACAATCTGAATGCGACCGGGGGGGGGGGGC  750

seq1  AAAGAATGAATGCAAATATTTTTTTTAAAATCATTATTTGATTTGTAATT  800
      |||||| |||||| | ||  | |    |||||  |||  || || | |||
seq2  AAAGAACGAATGC-ACTA-CTCTACAGAAATCGATATGGGA-TTATGATT  797

seq1  TTATTGCCTTCACCAATATGCTTCAGAGAATTTGACATAGAGATTTGAAA  850
      | | ||||||||||||| |||||||||| | |||||||| ||||| ||||
seq2  TCAGTGCCTTCACCAATCTGCTTCAGAG-ACTTGACATACAGATTAGAAA  846

seq1  GTGGTGAGTTCTGAACATAAAAATAGAATGTCTATGGTTTTATTCATATT  900
      || | ||| | ||||||  ||     |||| || | | | ||||| || |
seq2  GTCGGGAGCTGTGAACA-GAAGCCCTAATGACT-TCGATCTATTCGTACT  894

seq1  TAGGAGCAGCAGCTTGAAGGAAGGGAAACTGC  932
       | ||  |||  | || | |||||||||||||
seq2  CACGA-AAGCCTCATGGAAGAAGGGAAACTGC  925