BAC Information

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BAC

Clone NameB6Ng01-102G11
Chromosome14 (Build37)
Map Location 87,976,292 - 87,977,209
singlet/doubletsinglet
Overlap genenone
Upstream geneDiap3, EG665324, Tdrd3
Downstream geneLOC100043317, LOC100043780, LOC668624, LOC668625, Pcdh20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102G11.bB6Ng01-102G11.g
ACCDH911307DH911308
length1,234920
definitionDH911307|Mus musculus domesticus DNA, BAC clone: B6Ng01-102G11, 5' end.DH911308|Mus musculus domesticus DNA, BAC clone: B6Ng01-102G11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttacctctgtacccattttttaatagggttatttggttc
tctggagtcttaacttcttgagttctttgtatatatattggatattagcc
ctctatcggatgtagggttgttaaagatctttccccagtctgttgccgtt
ttgtcttattgacagtattctttgctttacggaagctttgccattttatg
agatcccatttgtctatttttgatcttagagcataagtcattggtgttct
gttcaggaaaatttcccctgtgcccatgtgtttgaggcttttccccaatt
tctcttctattagtttcagtgcctctggttttatgtggaggtccttgatc
cacttggacttgatcaagctttgtatatggagataagaatagatcaactt
gcatttttctacatgttgactgcccgttgaaccagcaccatttgttgctg
tctgttttctacttgatgcttcaagctcctttgtcaagatcaagtgactg
caggtgtgtgggctcatatctgggtcttcagttctactctattgatctac
ctgcctgtctttgtcccaataccatacaggttttttttaatcactattgc
tctttaatacagcttgaggtcagggatggtgattcccccaaatttctttt
gttgttgagaatagttttcactatcctgggttttttgttactccaaatga
atttacaaattgctctttctaagtctatgaagaattgagttggaatttga
tggtgattgcattgaatactcaaaatgcaattcacaaaccgaatgacgct
caagaaggaagaccaaattgtggatactttgatccttcttagaaggagaa
caaaatcatcttgggaggaatatgtagaaaaagtgtggagtagagactga
aagtatgaccagtttagagactgccccacagtcatcaaacccagacatta
ttgagatgtcaagaagtgctgctgacaggagcctgatacagtagctgtat
caaaaaggttctaccagagctgataaattagaggtcgatgcttcacggcc
acccattggactgaaccacgggtcccaatggaggagctagagaaagagga
actaaggagcttccctcccttgagagacaattcaccaaccgacctccgag
ttccgactatctccaccaagaatatcatgggaccctgaatcttgtcttgt
agaggatggctctggatatagggaggagagactg
gaattcttttctcccagctgctctacgcagtatttcttctctcagaagag
gcaatataagtgcatcgaagtggttctggtaacagtgggctgtgcagtgg
agggcaccattgcttcttttcaatttccttgtcaataaaagaaagtggtt
ggcaaggaaatgttaactgtttgatggattgggcaattaccctggtctga
ccataacacactgtatgcatttgatgaaatagcatgttgtaccttatagc
tatgtacaatgattgtatcaatttaaaaagatatgtgtgtgtgtgtgtgt
gtgtgtgtgtgtataaacaataaatcagagagagagagaaagagagagag
agagctgtaaaacaaaaaaagagaagttcatcacctgtaatacttttcca
ggcatatgtctttatagtttatgttttaatatgaaaccttataattgtaa
gggttgaaaatgagtcattcttagcacattcaaactcaagattacataat
atgctgaaacttcagttcacccttaaaagctcaaaaacaattgctccaat
acaaagttatctgtcgtatctacctttaggcagtcaactaataaccagca
aaataatggtaataaagtcacttcaaatctagagccctgtgcaggaaaca
acgtggaagcaacggaaagaagtcaccacacctgaaggaatgggctaagg
aaaggtttcccaattgaaatggagctgtccccagtcttaaaaaggaagtt
gctaacacacaggtgggtaggatcatagactgggatggaggtattctgga
caaagaagataaaactctaaaaataatatatcaggaaagacagcacattg
aggaatgaagtaactgagaatggccatggcacatggataaggagagggtt
ggtgaaaggaggtaggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_87976292_87977209
seq2: B6Ng01-102G11.g_67_986 (reverse)

seq1  CCCACCTACCTCCTTTCACC-ACCCTCTCCTTATCCATGTGCCATGGCCA  49
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCCACCTACCTCCTTTCACCAACCCTCTCCTTATCCATGTGCCATGGCCA  50

seq1  TTCTCAGTTACTTCATTCCTCAATGTGCTGTCTTTCCTGATATATTATTT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGTTACTTCATTCCTCAATGTGCTGTCTTTCCTGATATATTATTT  100

seq1  TTAGAGTTTTATCTTCTTTGTCCAGAATACCTCCAT-CCAGTCTATGATC  148
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTAGAGTTTTATCTTCTTTGTCCAGAATACCTCCATCCCAGTCTATGATC  150

seq1  CTACCCACCTGTGTGTTAGCAACTTCCTTTTTAAGACTGGGGACAGCTCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCACCTGTGTGTTAGCAACTTCCTTTTTAAGACTGGGGACAGCTCC  200

seq1  ATTTCAATTGGGAAACCTTTCCTTAGCCCATTCCTTCAGGTGTGGTGACT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAATTGGGAAACCTTTCCTTAGCCCATTCCTTCAGGTGTGGTGACT  250

seq1  TCTTTCCGTTGCTTCCACGTTGTTTCCTGCACAGGGCTCTAGATTTGAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCGTTGCTTCCACGTTGTTTCCTGCACAGGGCTCTAGATTTGAAG  300

seq1  TGACTTTATTACCATTATTTTGCTGGTTATTAGTTGACTGCCTAAAGGTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTATTACCATTATTTTGCTGGTTATTAGTTGACTGCCTAAAGGTA  350

seq1  GATACGACAGATAACTTTGTATTGGAGCAATTGTTTTTGAGCTTTTAAGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACGACAGATAACTTTGTATTGGAGCAATTGTTTTTGAGCTTTTAAGG  400

seq1  GTGAACTGAAGTTTCAGCATATTATGTAATCTTGAGTTTGAATGTGCTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACTGAAGTTTCAGCATATTATGTAATCTTGAGTTTGAATGTGCTAA  450

seq1  GAATGACTCATTTTCAACCCTTACAATTATAAGGTTTCATATTAAAACAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACTCATTTTCAACCCTTACAATTATAAGGTTTCATATTAAAACAT  500

seq1  AAACTATAAAGACATATGCCTGGAAAAGTATTACAGGTGATGAACTTCTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATAAAGACATATGCCTGGAAAAGTATTACAGGTGATGAACTTCTC  550

seq1  TTTTTTTGTTTTACAGCTCTCTCTCTCTCTTTCTCTCTCTCTCTGATTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTTTTACAGCTCTCTCTCTCTCTTTCTCTCTCTCTCTGATTTA  600

seq1  TTGTTTATACACACACACACACACACACACACACACATATCTTTTTAAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATACACACACACACACACACACACACACACATATCTTTTTAAAT  650

seq1  TGATACAATCATTGTACATAGCTATAAGGTACAACATGCTATTTCATCAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAATCATTGTACATAGCTATAAGGTACAACATGCTATTTCATCAA  700

seq1  ATGCATACAGTGTGTTATGGTCAGACCAGGGTAATTGCCCAATCCATCAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATACAGTGTGTTATGGTCAGACCAGGGTAATTGCCCAATCCATCAA  750

seq1  ACAGTTAACATTTCCTTGCCAACCACTTTCTTTTATTGACAAGGAAATTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTAACATTTCCTTGCCAACCACTTTCTTTTATTGACAAGGAAATTG  800

seq1  AAAAGAAGCAATGGTGCCCTCCACTGCACAGCCCACTGTTACCAGAACCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGCAATGGTGCCCTCCACTGCACAGCCCACTGTTACCAGAACCA  850

seq1  CTTCGATGCACTTATATTGCCTCTTCTGAGAGAAGAAATACTGCGTAGAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGATGCACTTATATTGCCTCTTCTGAGAGAAGAAATACTGCGTAGAG  900

seq1  CAGCTGGGAGAAAAGAATTC  918
      ||||||||||||||||||||
seq2  CAGCTGGGAGAAAAGAATTC  920