BAC Information

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BAC

Clone NameB6Ng01-103L02
Chromosome14 (Build37)
Map Location 123,841,339 - 123,842,459
singlet/doubletsinglet
Overlap geneVgcnl1
Upstream geneEG328479, EG432907, Zic5, Zic2, ENSMUSG00000075465, LOC668847, Pcca, BC006662, 4930594M22Rik, Tmtc4
Downstream geneItgbl1, LOC668700, Fgf14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103L02.bB6Ng01-103L02.g
ACCDH912207DH912208
length1,1051,085
definitionDH912207|Mus musculus domesticus DNA, BAC clone: B6Ng01-103L02, 5' end.DH912208|Mus musculus domesticus DNA, BAC clone: B6Ng01-103L02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctttccccctctaagatttattagtgaacctttgccaagagc
catctaagagaagctaaaaactagcaggtgatcttcctgagatggttctg
ccatggactgtaaagctgcgatggatttgctcctttaggcaaggccaagg
agattacatttgaggaaagattcctgctattaatatgcttttcctgttgt
tattaaatatatagttatgtaacagtcactaggtattagctcaccctttt
gaacagattcctgcagaaccacgaagatgtagtgtttggtcgtggttgta
tagaaaaatagatgatttcttaactcttaatgatgattctctaagaattc
ctaaaattatattagtaattattaagctctttttataataggactgctac
taagacctctctgataattaaaactgcaatgagaactctaaaagtcttca
agtgtcagcagttaattgcttctgagagagaaaaggcatttacaatttag
agtgcattccaagaggctgtgaaataattaaccaaaggtcataaaaaagg
aactaaggatttcctataggtgcaaggacagaagatgggaagttgactgg
gtttatgtatgcaaaacttcaataataacttagtcacaacctgttgagct
tgtaacagataaagaatgtttagccagatgattactctatgtggatatgc
atctaaacatctctgttgtaaaattcttactcaatttatgttttggattt
atatgtaaacctgtgatgaactctttaccatgtgatcatgcattcttaaa
gacgaataaatgcagaggaaaaagagaactcagagaactttttagaaagc
aagagaagaatcttttagagaaaacttttttggagaacattttagagaga
acgttttagatatagaacttagaataagatgaaaatcaattttcaaagta
tctttttctctctctgacttcactagcatactggggagttagagtcatgg
atttcctgtggagaaggggtaagactacttaatatcaccgatagataggc
tactgtatctcctaaacagtggtttacttcaaatgaatagaaaggtctag
gactt
gaattcctagttgttttaagttaggatctttttgcattttgtattttctt
tgattgttctgtccatgttctctatggaatcttctgcacctgagattctc
tcttccatctcttgtattctgttggtgatgcttgcatctatggttcctga
tttctttcctagggtttctatctccagagttgtctccctttgggttttct
ttcaattgtttctacttccatttttagaacctggacagttttgttcaatt
ctatcacctgtttggtagtgttttcctgtaactctctaagggatttttgt
gtttcctctttaaaggcttctagctgtttacctgtgttttcctgtattta
ctttttaaagtcctccatcatcatcatgagaaatgactttagatccatgt
cttgtttttctggtgtgatggtttatccaggacttgctatggcgggagag
tttggttctgatgatgccaagtaactggtttctgttgcttatgttctcat
gcttgcctcctgccatctgattatctcaagtgcttgcttccctcaataca
tctgattggagcctgtccttcctatagacccagtttattcaggactcctc
agagtccagctttctctgtgatcctttgcttgtgagctcttgtgaacttg
agattctgggtgtgtcagagtttttggcagtcaagcttcctctgagaccc
tgaaatactggtgtgacctagctcctgttatcctgggatcctgttgtcct
aagatcctgggcgtgttacagtgcctgaaaatggtgtctcctttgaggac
cataaagctgtccagtcagagatcctaagatccctcggagagtcctctgg
ggaccatgggggtgtccgccgactctgggccctagtgacctggtgctggc
accgaccagaagggacttgtgtcctggtcaggctggttttctgcttcctt
ctgctgtctcagtccacgtgattggattggaacagatgttgtgttcactc
acagtgatcctaacatcatgtgggagagtctctagggacatgggtgtgtc
tgcgacctcccataactatggttacacatcctgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_123841339_123842459
seq2: B6Ng01-103L02.b_42_1146

seq1  GAATTCCTCTTTCCCCCTCTAAGATTTATTAGTGAACCTTTGCCAAGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTTCCCCCTCTAAGATTTATTAGTGAACCTTTGCCAAGAGC  50

seq1  CATCTAAGAGAAGCTAAAAACTAGCAGGTGATCTTCCTGAGATGGTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAGAGAAGCTAAAAACTAGCAGGTGATCTTCCTGAGATGGTTCTG  100

seq1  CCATGGACTGTAAAGCTGCGATGGATTTGCTCCTTTAGGCAAGGCCAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGACTGTAAAGCTGCGATGGATTTGCTCCTTTAGGCAAGGCCAAGG  150

seq1  AGATTACATTTGAGGAAAGATTCCTGCTATTAATATGCTTTTCCTGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACATTTGAGGAAAGATTCCTGCTATTAATATGCTTTTCCTGTTGT  200

seq1  TATTAAATATATAGTTATGTAACAGTCACTAGGTATTAGCTCACCCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATATATAGTTATGTAACAGTCACTAGGTATTAGCTCACCCTTTT  250

seq1  GAACAGATTCCTGCAGAACCACGAAGATGTAGTGTTTGGTCGTGGTTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGATTCCTGCAGAACCACGAAGATGTAGTGTTTGGTCGTGGTTGTA  300

seq1  TAGAAAAATAGATGATTTCTTAACTCTTAATGATGATTCTCTAAGAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAATAGATGATTTCTTAACTCTTAATGATGATTCTCTAAGAATTC  350

seq1  CTAAAATTATATTAGTAATTATTAAGCTCTTTTTATAATAGGACTGCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATTATATTAGTAATTATTAAGCTCTTTTTATAATAGGACTGCTAC  400

seq1  TAAGACCTCTCTGATAATTAAAACTGCAATGAGAACTCTAAAAGTCTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACCTCTCTGATAATTAAAACTGCAATGAGAACTCTAAAAGTCTTCA  450

seq1  AGTGTCAGCAGTTAATTGCTTCTGAGAGAGAAAAGGCATTTACAATTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCAGCAGTTAATTGCTTCTGAGAGAGAAAAGGCATTTACAATTTAG  500

seq1  AGTGCATTCCAAGAGGCTGTGAAATAATTAACCAAAGGTCATAAAAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATTCCAAGAGGCTGTGAAATAATTAACCAAAGGTCATAAAAAAGG  550

seq1  AACTAAGGATTTCCTATAGGTGCAAGGACAGAAGATGGGAAGTTGACTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGGATTTCCTATAGGTGCAAGGACAGAAGATGGGAAGTTGACTGG  600

seq1  GTTTATGTATGCAAAACTTCAATAATAACTTAGTCACAACCTGTTGAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGTATGCAAAACTTCAATAATAACTTAGTCACAACCTGTTGAGCT  650

seq1  TGTAACAGATAAAGAATGTTTAGCCAGATGATTACTCTATGTGGATATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACAGATAAAGAATGTTTAGCCAGATGATTACTCTATGTGGATATGC  700

seq1  ATCTAAACATCTCTGTTGTAAAATTCTTACTCAATTTATGTTTTGGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAACATCTCTGTTGTAAAATTCTTACTCAATTTATGTTTTGGATTT  750

seq1  ATATGTAAACCTGTGATGAACTCTTTACCATGTGATCATGCATTCTTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAAACCTGTGATGAACTCTTTACCATGTGATCATGCATTCTTAAA  800

seq1  GACGAATAAATGCAGAGGAAAAAGAGAACTCAGAGAACTTTTTAGAAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGAATAAATGCAGAGGAAAAAGAGAACTCAGAGAACTTTTTAGAAAGC  850

seq1  AAGAGAAGAATCTTTTAGAGAAAACTTTTTTGGAGAACATTTTAGAGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGAATCTTTTAGAGAAAACTTTTTTGGAGAACATTTTAGAGAGA  900

seq1  ACGTTTTAGATATAGAACTTAGAATAAAGATGAAAATCAATTTTCAAAGT  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACGTTTTAGATATAGAACTTAGAAT-AAGATGAAAATCAATTTTCAAAGT  949

seq1  ATCTTTTTCTCTCTCTGACTTCAACTAGCATACT-GGGAGTTAGAGTCAT  999
      |||||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  ATCTTTTTCTCTCTCTGACTTC-ACTAGCATACTGGGGAGTTAGAGTCAT  998

seq1  GAATTTCCTGTGGAGAAGGGGTAAAGACTACTTTAATTAATCACCGATAG  1049
      | |||||||||||||||||||| |||||||| |||||  |||||||||||
seq2  GGATTTCCTGTGGAGAAGGGGT-AAGACTAC-TTAAT--ATCACCGATAG  1044

seq1  ATAGGCTACCTGTTAATCTCCTAAACCAGTGGTTTTTAACCCTCCAAATG  1099
      |||||||| ||||  |||||||||| |||||||||      || ||||||
seq2  ATAGGCTA-CTGT--ATCTCCTAAA-CAGTGGTTT-----ACTTCAAATG  1085

seq1  AATAAGAAAGGTCTTAGGACTT  1121
      ||| ||||||||| ||||||||
seq2  AAT-AGAAAGGTC-TAGGACTT  1105