BAC Information

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BAC

Clone NameB6Ng01-105J21
Chromosome14 (Build37)
Map Location 90,260,143 - 90,387,869
singlet/doubletdoublet
Overlap geneEG328451
Upstream genenone
Downstream geneLOC100043336
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105J21.bB6Ng01-105J21.g
ACCDH913589DH913590
length1,1461,205
definitionDH913589|Mus musculus domesticus DNA, BAC clone: B6Ng01-105J21, 5' end.DH913590|Mus musculus domesticus DNA, BAC clone: B6Ng01-105J21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,386,747 - 90,387,869)(90,260,143 - 90,261,341)
sequence
gaattcttccagcacatctattttccttaaaatgatgcaattctattttc
tgtttctgaataaaactctgttgtgtatataagccatattgtcttcctac
ctgcacatttactgatggacacttaaattgttttctgtctataatgaaca
ctgctgaataggtttttgattgacaaagtgttgtgcattggagttcctta
aaacatgaaccagaacagtgtgaagaactataaagtagtttattaaaaat
tccaatttaaagcaggacatggtggcatatgcttttaatcccggatcgct
aatatcacagccaacttggtctccagagcaagttccaggacagccagaac
ttacacacacacacacacacacatacacacacacacacacacacacacac
acacacacacacacacacacacacacacacacacacatacacacacacat
acaatccctgtctaaaaaaaagtatttccttttttatagtaatatttaat
aatatacttctaaatatatttattattgagtagtctgtatgtaactttga
aagtttattagatatatctgtgaaacatcataatcaggcattgaaaattg
tttttctgtgatatctgttgaaaaaaatgaagtttaagatatcccgttgt
tttcccttcccctactctctcccactctggttcctcccctccccccagcc
tcctatgtttagtttgttcccccttctaagtgacatgaaactatctttgc
ttgggccacttttgggccttcctttcttgttaaactttcttattgtctgt
ggggtgtatcatggctattctgttcttttgggcctaatattcagttatca
gtgaatatgtaccgaatatgtaccgtgcctgttctttttttgggtttcag
ttccctctctagggagatattttctaattccaaatgttttgccccgcaaa
attcatcattgtttttcatttttaaatagctggaccagtagtctactgtg
taaacaaaccacatttttgctgtaccacaataggccgtaggagtgaataa
ttggggaagtatggaaaccatgaagaacatcaccctccaatagctaaggg
cttcccagggggagggaccggctcgtcattctacattcaaaacatt
gaattcaatacacagaaaaattaaaattcaaggtggtatatgacagagtt
gaattttaacaaaggtttaaactgaaatgtaaaatagacagttttatatt
tttctaagatagctgcagaggcaacttttaaattaatataataaaagaga
gagtaacttggaaaatctgtaagcagcagtgtatggcagttaagtcccat
tatcccaaatgtgaggaatcattgagtatcaccaacatgagagccaaaac
ttgaaagaaagcgctgaaaaaaattaatcaaagcaaacatgtcatacatt
tttaaagcatgtttctttctttagaatttctgatattgttccattgcctt
gacaattccacccagaaatgaattcataagcagagtctgatacaatcctc
ggtttcttttgtgaaatacatagatagggatgaaacactcatactactaa
tgcattattttacaaaactctcacttgactatttcaaatggcatggtaga
tggaatggaatatattatttcctgaaagggaatgtgagtgatatgccgca
tctatcattatacaatatctctgaaggaaaggggaatcatgaactctaac
aaagtggaaaaagtcttttctactccatccttcccttgtttcccacatcc
tgtgcatagaggaattcttctcctcaaaacgcataacatatcaattctga
cagagtacatagtattaaagctagattgcttagagtttatggttgtctgt
caaaaccagtatgcgatgaaagagaaatatattagattgtgcaatatgca
ttatctatgtatgggatggtgaaagaaagaaagtagcttagtactacctg
tgtgagctttaatctttcttagattatcagggctgtataatgaagtttaa
tagtgtagtttaaatatttgctgcaccactgaaattattttccatagtgt
ggacctacacatgcaagatcatggctgcatctcagtcttttttttaatca
ttaaaaataaagccatagagatggcgttaacctactacataaaaagttgg
tttttaaaaatttagttgtcactggggttgctactccttgggggacatta
tgaccctaaatactttcagtcttactgaaaaacagaaacttggacatcgg
ggaatcccggcctcaattagacctcaaggttttttttgtggggtggtttg
ttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_90386747_90387869
seq2: B6Ng01-105J21.b_38_1183 (reverse)

seq1  AATGTTTTGAATGTAGAATGACGACCCCGTTCCTCCCC--TGGAAGCCC-  47
      |||||||||||||||||||||||| || || |||||||   |||||||| 
seq2  AATGTTTTGAATGTAGAATGACGAGCCGGTCCCTCCCCCTGGGAAGCCCT  50

seq1  TAGCTATTGGA-GGTGATG-TCTTCA--GGTTCCAT-CTTCCC--ATTAT  90
      ||||||||||| ||||||| ||||||  | |||||| ||||||  |||||
seq2  TAGCTATTGGAGGGTGATGTTCTTCATGGTTTCCATACTTCCCCAATTAT  100

seq1  TCACTCCTA-GGCATA-TGTGGATACAG--AAAATGTGGTTTGTTTACAC  136
      ||||||||| ||| || ||||| |||||  ||||||||||||||||||||
seq2  TCACTCCTACGGCCTATTGTGG-TACAGCAAAAATGTGGTTTGTTTACAC  149

seq1  AGTAGACTACT-GTTCAGCTATTT-AAAATGAAAA--CATGATGAATTTT  182
      ||||||||||| || ||||||||| ||||||||||   ||||||||||||
seq2  AGTAGACTACTGGTCCAGCTATTTAAAAATGAAAAACAATGATGAATTTT  199

seq1  GCGGG--CAAACATTTGGAATTAGAAAATATCATCCTCAGAGAGGGAACT  230
      |||||   |||||||||||||||||||||||| |||  ||||||||||||
seq2  GCGGGGCAAAACATTTGGAATTAGAAAATATC-TCCCTAGAGAGGGAACT  248

seq1  GAAACCC-AAAAAAGAACAGGCACGGTACATATTCGGTACATATTCACTG  279
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCAAAAAAAGAACAGGCACGGTACATATTCGGTACATATTCACTG  298

seq1  ATAACTGAATATTAGG-CCAAAAGAACAGAATAGCCATGATACAACCCAC  328
      |||||||||||||||| ||||||||||||||||||||||||||| |||||
seq2  ATAACTGAATATTAGGCCCAAAAGAACAGAATAGCCATGATACACCCCAC  348

seq1  AGACAATAAG-AAGTTTAACAAG-AAGGAAGGCCC-AAAGTGGCCCAAGT  375
      |||||||||| |||||||||||| ||||||||||| ||||||||||||| 
seq2  AGACAATAAGAAAGTTTAACAAGAAAGGAAGGCCCAAAAGTGGCCCAAGC  398

seq1  AAAGATAGTTTCATGTCACTTAGAAGGGGGAACAAACTAAACATAGGAGG  425
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAGTTTCATGTCACTTAGAAGGGGGAACAAACTAAACATAGGAGG  448

seq1  CTGGGGGGAGGGGAGGAACCAGAGTGGGAGAGAGTAGGGGAAGGGAAAAC  475
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGGAGGGGAGGAACCAGAGTGGGAGAGAGTAGGGGAAGGGAAAAC  498

seq1  AACGGGATATCTTAAACTTCATTTTTTTCAACAGATATCACAGAAAAACA  525
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGGATATCTTAAACTTCATTTTTTTCAACAGATATCACAGAAAAACA  548

seq1  ATTTTCAATGCCTGATTATGATGTTTCACAGATATATCTAATAAACTTTC  575
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAATGCCTGATTATGATGTTTCACAGATATATCTAATAAACTTTC  598

seq1  AAAGTTACATACAGACTACTCAATAATAAATATATTTAGAAGTATATTAT  625
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTACATACAGACTACTCAATAATAAATATATTTAGAAGTATATTAT  648

seq1  TAAATATTACTATAAAAAAGGAAATACTTTTTTTTAGACAGGGATTGTAT  675
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTACTATAAAAAAGGAAATACTTTTTTTTAGACAGGGATTGTAT  698

seq1  GTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  725
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  748

seq1  GTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTAAGT  775
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTAAGT  798

seq1  TCTGGCTGTCCTGGAACTTGCTCTGGAGACCAAGTTGGCTGTGATATTAG  825
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTGTCCTGGAACTTGCTCTGGAGACCAAGTTGGCTGTGATATTAG  848

seq1  CGATCCGGGATTAAAAGCATATGCCACCATGTCCTGCTTTAAATTGGAAT  875
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCCGGGATTAAAAGCATATGCCACCATGTCCTGCTTTAAATTGGAAT  898

seq1  TTTTAATAAACTACTTTATAGTTCTTCACACTGTTCTGGTTCATGTTTTA  925
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATAAACTACTTTATAGTTCTTCACACTGTTCTGGTTCATGTTTTA  948

seq1  AGGAACTCCAATGCACAACACTTTGTCAATCAAAAACCTATTCAGCAGTG  975
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTCCAATGCACAACACTTTGTCAATCAAAAACCTATTCAGCAGTG  998

seq1  TTCATTATAGACAGAAAACAATTTAAGTGTCCATCAGTAAATGTGCAGGT  1025
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTATAGACAGAAAACAATTTAAGTGTCCATCAGTAAATGTGCAGGT  1048

seq1  AGGAAGACAATATGGCTTATATACACAACAGAGTTTTATTCAGAAACAGA  1075
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGACAATATGGCTTATATACACAACAGAGTTTTATTCAGAAACAGA  1098

seq1  AAATAGAATTGCATCATTTTAAGGAAAATAGATGTGCTGGAAGAATTC  1123
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAATTGCATCATTTTAAGGAAAATAGATGTGCTGGAAGAATTC  1146

seq1: chr14_90260143_90261341
seq2: B6Ng01-105J21.g_68_1272

seq1  GAATTCAATACACAGAAAAATTAAAATTCAAGGTGGTATATGACAGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATACACAGAAAAATTAAAATTCAAGGTGGTATATGACAGAGTT  50

seq1  GAATTTTAACAAAGGTTTAAACTGAAATGTAAAATAGACAGTTTTATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTAACAAAGGTTTAAACTGAAATGTAAAATAGACAGTTTTATATT  100

seq1  TTTCTAAGATAGCTGCAGAGGCAACTTTTAAATTAATATAATAAAAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAGATAGCTGCAGAGGCAACTTTTAAATTAATATAATAAAAGAGA  150

seq1  GAGTAACTTGGAAAATCTGTAAGCAGCAGTGTATGGCAGTTAAGTCCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAACTTGGAAAATCTGTAAGCAGCAGTGTATGGCAGTTAAGTCCCAT  200

seq1  TATCCCAAATGTGAGGAATCATTGAGTATCACCAACATGAGAGCCAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCAAATGTGAGGAATCATTGAGTATCACCAACATGAGAGCCAAAAC  250

seq1  TTGAAAGAAAGCGCTGAAAAAAATTAATCAAAGCAAACATGTCATACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGAAAGCGCTGAAAAAAATTAATCAAAGCAAACATGTCATACATT  300

seq1  TTTAAAGCATGTTTCTTTCTTTAGAATTTCTGATATTGTTCCATTGCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCATGTTTCTTTCTTTAGAATTTCTGATATTGTTCCATTGCCTT  350

seq1  GACAATTCCACCCAGAAATGAATTCATAAGCAGAGTCTGATACAATCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTCCACCCAGAAATGAATTCATAAGCAGAGTCTGATACAATCCTC  400

seq1  GGTTTCTTTTGTGAAATACATAGATAGGGATGAAACACTCATACTACTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTTTTGTGAAATACATAGATAGGGATGAAACACTCATACTACTAA  450

seq1  TGCATTATTTTACAAAACTCTCACTTGACTATTTCAAATGGCATGGTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTATTTTACAAAACTCTCACTTGACTATTTCAAATGGCATGGTAGA  500

seq1  TGGAATGGAATATATTATTTCCTGAAAGGGAATGTGAGTGATATGCCGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGGAATATATTATTTCCTGAAAGGGAATGTGAGTGATATGCCGCA  550

seq1  TCTATCATTATACAATATCTCTGAAGGAAAGGGGAATCATGAACTCTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCATTATACAATATCTCTGAAGGAAAGGGGAATCATGAACTCTAAC  600

seq1  AAAGTGGAAAAAGTCTTTTCTACTCCATCCTTCCCTTGTTTCCCACATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGAAAAAGTCTTTTCTACTCCATCCTTCCCTTGTTTCCCACATCC  650

seq1  TGTGCATAGAGGAATTCTTCTCCTCAAAACGCATAACATATCAATTCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATAGAGGAATTCTTCTCCTCAAAACGCATAACATATCAATTCTGA  700

seq1  CAGAGTACATAGTATTAAAGCTAGATTGCTTAGAGTTTATGGTTGTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTACATAGTATTAAAGCTAGATTGCTTAGAGTTTATGGTTGTCTGT  750

seq1  CAAAACCAGTATGCGATGAAAGAGAAATATATTAGATTGTGCAATATGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCAGTATGCGATGAAAGAGAAATATATTAGATTGTGCAATATGCA  800

seq1  TTATCTATGTATGGGATGGTGAAAGAAAGAAAGTAGCTTAGGTACTACCT  850
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTATCTATGTATGGGATGGTGAAAGAAAGAAAGTAGCTTA-GTACTACCT  849

seq1  GTGTGAGCTTTAATCTTTCTTAGATTATCAGGGCTGTATAATGAAGTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGCTTTAATCTTTCTTAGATTATCAGGGCTGTATAATGAAGTTTA  899

seq1  ATAGGTGTAGTTTAAATATTTGCTGCACCACTGAAATTATTTTCCATAGT  950
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATA-GTGTAGTTTAAATATTTGCTGCACCACTGAAATTATTTTCCATAGT  948

seq1  GTGGACCTACACATGCCAGATCATGGCTGCATCTCAGTC-TTTTTTTAAT  999
      |||||||||||||||| |||||||||||||||||||||| ||||||||||
seq2  GTGGACCTACACATGCAAGATCATGGCTGCATCTCAGTCTTTTTTTTAAT  998

seq1  CATTAAAAATAAAGCCATAGAGAT-GCGTTAACCTACTACAT-AAAAGTG  1047
      |||||||||||||||||||||||| ||||||||||||||||| |||||| 
seq2  CATTAAAAATAAAGCCATAGAGATGGCGTTAACCTACTACATAAAAAGTT  1048

seq1  TGTTTTTAAATATTTAGTTGTCACTGTGGTTGCTACT-CTTGGTGCA-AT  1095
       ||||||||| ||||||||||||||| |||||||||| ||||| | | ||
seq2  GGTTTTTAAAAATTTAGTTGTCACTGGGGTTGCTACTCCTTGGGGGACAT  1098

seq1  TATTAACCTAAATACTTTCCAGTCCTACTTAGAAACCAGAACTATGGAGC  1145
      ||| | |||||||||||| ||||| |||| | ||| |||||   ||||  
seq2  TATGACCCTAAATACTTT-CAGTCTTACTGA-AAAACAGAAACTTGGA--  1144

seq1  TCACTGGGTAATCCCTGCCTCATATTGA-CTCAGAGGTTTTTTTT-----  1189
       ||  ||| |||||| ||||||  | || |||| |||||||||||     
seq2  -CATCGGGGAATCCCGGCCTCAATTAGACCTCA-AGGTTTTTTTTGTGGG  1192

seq1  ---TTTTGTTGTT  1199
          |||||||||
seq2  GTGGTTTGTTGTT  1205