BAC Information

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BAC

Clone NameB6Ng01-105K13
Chromosome14 (Build37)
Map Location 8,305,732 - 8,492,718
singlet/doubletdoublet
Overlap geneLOC100042286, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893
Upstream geneLOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC666957, LOC100042263
Downstream geneENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105K13.bB6Ng01-105K13.g
ACCDH913618DH913619
length1,1181,035
definitionDH913618|Mus musculus domesticus DNA, BAC clone: B6Ng01-105K13, 5' end.DH913619|Mus musculus domesticus DNA, BAC clone: B6Ng01-105K13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,305,732 - 8,306,851)(8,491,682 - 8,492,718)
sequence
gaattcctaaaagagcagaaaagctatcttccagctggtttgctaagcta
tgttcctcttcctaaccaccattgtcagacatatgccacactccctgtta
caggcccggttgccttgaaatgtataagctgcctcagacataaagatatg
gggaacattgtcaggtcatatcagatgggacgcagggaaatcctgaagtt
catagtgcttagcactatcaagcactaattaatcgtgtgtcttcaaatcc
aaagtgtctgagtcctcaccacataacatgaccaggggagcatccttctc
tgttcttttcatcagagactcaagttacctacagtaatctggaagatgaa
gtgcttcaactcccttccatgaaaggacacactgttattctcatagtgcc
cactcctgacattttttgctactcaaaatgaaattaaatagatcccagaa
aagtagctgcaggtttgtcaattcctggctctgtcaaactcatcatcaga
aattcttgactctttgtctgacattgacaaagtccaaggcttcatcttgt
aagacctactcctggaaggcccagctcaagcctacctctaccaggaagtt
ccccaactctgcccaggactcactgtgccttctccataaccatttccttc
ttcctttttcatgagaaaggattcctcctccttctctgttggtctggtct
ctccttcatcgccattctctttctgaaatagcctgagcagccaggaaaac
attcctgctggtgaacccagagcaaacagaagggatgaaccacaggcagt
ttgctgtcaccacaacacaggtgacaacacagaagattctagttctatcc
tagatacaagagattctccaaggaggcattactgatgatgtcactagcaa
ctgccatgacctacctgttaactagttctgcccagcttggtccttttctg
ggtgcctcttcctggagcctctcatggacccgtgggatcccctttggcaa
cttcttcttccaagcttggagaattcctactgcttaattagatgtcaatg
tgcctttgagggaacgttgggtaaggactctgacatgcctcagagatttt
gttgtagcaaactctagg
gaattcacactgctgtgcacaaacccacacacagacacagacacccaagt
gaaaaagaaaagtcaaaaagtgtaacaacatgcttgaaaaacagcagttc
gcttctggtctgggatagctcagttggcctagaggaatgaagggctgggt
ttgagtgagccccagtgttcatctgtgatcccagtgctgaggtaaaggca
gcatggtcagaatgatggagatctgtgagttatcatctggctgctaacta
aaagcaagggaggaacttgtagactgctcactcaccccacttaaccctca
ttcaaagtaaatgaaggacaggctacttaggcagcaggtaagaggccact
gaacaaagtatagccacaaagaggacccaacattccaaggcccctttaaa
ggagagattcaggaatgcaaatctagtcagtcaagtcacagaaagtgagg
gttggaaaccatccagtggcttagctctctccacaatccttagtgacctt
tataggtgtagctccagtggaatattagccttggaagttagtatgaggtg
ggagcatgctggatcaagtacgtgttttgaattttcggtttcaaaacgtg
tgaatgcatctgtctaccagactaagggccaggagatgcaggagtctgaa
gtccatgagagaggaaatgacccatgcaaatgcagtcactcctctgtttg
caactagatggaaactgtctccactgccagtaaagatgatttcaggaaag
atgattgaaaaacttgctagttgcaattttcattttctttttccagagag
cagcagagagacagttgacatttgagctgtctctgaactgcccctgtccc
taatttgagttgagagctcacagggaaacacagacctgctcctagctggt
tttcttttcacaaatctttcagccatagaaaatgattaaaagcaggctcc
ccagccagtccagcaggacatcccagctgtccaaataaggtgcttgggaa
gctgcctctgggtgcaaagcacagccttggctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8305732_8306851
seq2: B6Ng01-105K13.b_41_1158

seq1  GAATTCCTAAAAGAGCAGAAAAGCTATCTTCCAGCTGGTTTGCTAAGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAAAGAGCAGAAAAGCTATCTTCCAGCTGGTTTGCTAAGCTA  50

seq1  TGTTCCTCTTCCTAACCACCATTGTCAGACATATGCCACACTCCCTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTCTTCCTAACCACCATTGTCAGACATATGCCACACTCCCTGTTA  100

seq1  CAGGCCCGGTTGCCTTGAAATGTATAAGCTGCCTCAGACATAAAGATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCGGTTGCCTTGAAATGTATAAGCTGCCTCAGACATAAAGATATG  150

seq1  GGGAACATTGTCAGGTCATATCAGATGGGACGCAGGGAAATCCTGAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACATTGTCAGGTCATATCAGATGGGACGCAGGGAAATCCTGAAGTT  200

seq1  CATAGTGCTTAGCACTATCAAGCACTAATTAATCGTGTGTCTTCAAATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGCTTAGCACTATCAAGCACTAATTAATCGTGTGTCTTCAAATCC  250

seq1  AAAGTGTCTGAGTCCTCACCACATAACATGACCAGGGGAGCATCCTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTCTGAGTCCTCACCACATAACATGACCAGGGGAGCATCCTTCTC  300

seq1  TGTTCTTTTCATCAGAGACTCAAGTTACCTACAGTAATCTGGAAGATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTTCATCAGAGACTCAAGTTACCTACAGTAATCTGGAAGATGAA  350

seq1  GTGCTTCAACTCCCTTCCATGAAAGGACACACTGTTATTCTCATAGTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCAACTCCCTTCCATGAAAGGACACACTGTTATTCTCATAGTGCC  400

seq1  CACTCCTGACATTTTTTGCTACTCAAAATGAAATTAAATAGATCCCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTGACATTTTTTGCTACTCAAAATGAAATTAAATAGATCCCAGAA  450

seq1  AAGTAGCTGCAGGTTTGTCAATTCCTGGCTCTGTCAAACTCATCATCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCTGCAGGTTTGTCAATTCCTGGCTCTGTCAAACTCATCATCAGA  500

seq1  AATTCTTGACTCTTTGTCTGACATTGACAAAGTCCAAGGCTTCATCTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTGACTCTTTGTCTGACATTGACAAAGTCCAAGGCTTCATCTTGT  550

seq1  AAGACCTACTCCTGGAAGGCCCAGCTCAAGCCTACCTCTACCAGGAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTACTCCTGGAAGGCCCAGCTCAAGCCTACCTCTACCAGGAAGTT  600

seq1  CCCCAACTCTGCCCAGGACTCACTGTGCCTTCTCCATAACCATTTCCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACTCTGCCCAGGACTCACTGTGCCTTCTCCATAACCATTTCCTTC  650

seq1  TTCCTTTTTCATGAGAAAGGATTCCTCCTCCTTCTCTGTTGGTCTGGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTTCATGAGAAAGGATTCCTCCTCCTTCTCTGTTGGTCTGGTCT  700

seq1  CTCCTTCATCGCCATTCTCTTTCTGAAATAGCCTGAGCAGCCAGGAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCATCGCCATTCTCTTTCTGAAATAGCCTGAGCAGCCAGGAAAAC  750

seq1  ATTCCTGCTGGTGAACCCAGAGCAAACAGAAGGGATGAACCACAGGCAG-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTCCTGCTGGTGAACCCAGAGCAAACAGAAGGGATGAACCACAGGCAGT  800

seq1  TTGCTGTCACCACAACACAGGTGACAACACAGAAGATTCTAGTTCTATCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTCACCACAACACAGGTGACAACACAGAAGATTCTAGTTCTATCC  850

seq1  TAGATACAAGAGATTCTCCAAGGAAGGCATTACTGATGATGTCACTAGCA  899
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAGATACAAGAGATTCTCCAAGG-AGGCATTACTGATGATGTCACTAGCA  899

seq1  ACTGCCATGACCTACCTGTTAACTAGTTCTGCCCAGCTTGGTCCTTTTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCATGACCTACCTGTTAACTAGTTCTGCCCAGCTTGGTCCTTTTCT  949

seq1  GGGGTGCCTC-TCCTGGAGCCTCTCATGGACCCGTGGGATCCCCTTTGGC  998
       ||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  -GGGTGCCTCTTCCTGGAGCCTCTCATGGACCCGTGGGATCCCCTTTGGC  998

seq1  AACCTCTCCTTCCAAAGCTGGAGAATT-CTACTGCTTAATTAGATGTC-A  1046
      ||| ||| |||||||   ||||||||| |||||||||||||||||||| |
seq2  AACTTCTTCTTCCAAGCTTGGAGAATTCCTACTGCTTAATTAGATGTCAA  1048

seq1  TGTGCTTTTGAGGGGGAACGTT-GGTTAGGACTCTGACATGCTTAAGAGA  1095
      ||||| |||||  ||||||||| ||| ||||||||||||||| | |||||
seq2  TGTGCCTTTGA--GGGAACGTTGGGTAAGGACTCTGACATGCCTCAGAGA  1096

seq1  TTTTGTTGGCACCCAAAACTCTAGG  1120
      ||||||||   |   ||||||||||
seq2  TTTTGTTGTAGC---AAACTCTAGG  1118

seq1: chr14_8491682_8492718
seq2: B6Ng01-105K13.g_70_1104 (reverse)

seq1  CAGAG-CAAGGCTGTGCTTTGCACCCCTGAGCAGC-TCCCAAGCACC-TA  47
      ||||| ||||||||||||||||||||    ||||| ||||||||||| ||
seq2  CAGAGCCAAGGCTGTGCTTTGCACCCAGAGGCAGCTTCCCAAGCACCTTA  50

seq1  TTCTGGCAGCTGGGATGTCTGGCTGGGCTGGCTGGGGAGCCCTGCTTTTA  97
      ||  | |||||||||||||  ||||| |||||||||||| ||||||||||
seq2  TTTGGACAGCTGGGATGTCCTGCTGGACTGGCTGGGGAG-CCTGCTTTTA  99

seq1  TTCATTTTCTATGGCTGAAAGATTTTGTGAAAAGAAAACCAGCTAAGGAG  147
       ||||||||||||||||||||| ||||||||||||||||||||| |||||
seq2  ATCATTTTCTATGGCTGAAAGA-TTTGTGAAAAGAAAACCAGCT-AGGAG  147

seq1  CAGGTCTGTGGTTCCCTGTGAGCTCTCAACTCAAATTAGGGACAGGGGCA  197
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTGTGTTTCCCTGTGAGCTCTCAACTCAAATTAGGGACAGGGGCA  197

seq1  GTTCAGAGACAGCTCAAATGTCAACTGTCTCTCCTGCTGCTCTCTGGGAA  247
      |||||||||||||||||||||||||||||||| |||||||||||| ||||
seq2  GTTCAGAGACAGCTCAAATGTCAACTGTCTCT-CTGCTGCTCTCT-GGAA  245

seq1  AAAGAAAATGAAAATTGCAACTAGCAAGTTTTTCAATCATCTTTCCTGAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATGAAAATTGCAACTAGCAAGTTTTTCAATCATCTTTCCTGAA  295

seq1  ATCATCTTTACTGGCAGTGGAGACAGTTTCCATCTAGTTGCAAACAGAGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTTTACTGGCAGTGGAGACAGTTTCCATCTAGTTGCAAACAGAGG  345

seq1  AGTGACTGCATTTGCATGGGTCATTTCCTCTCTCATGGACTTCAGACTCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTGCATTTGCATGGGTCATTTCCTCTCTCATGGACTTCAGACTCC  395

seq1  TGCATCTCCTGGCCCTTAGTCTGGTAGACAGATGCATTCACACGTTTTGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTCCTGGCCCTTAGTCTGGTAGACAGATGCATTCACACGTTTTGA  445

seq1  AACCGAAAATTCAAAACACGTACTTGATCCAGCATGCTCCCACCTCATAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGAAAATTCAAAACACGTACTTGATCCAGCATGCTCCCACCTCATAC  495

seq1  TAACTTCCAAGGCTAATATTCCACTGGAGCTACACCTATAAAGGTCACTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCCAAGGCTAATATTCCACTGGAGCTACACCTATAAAGGTCACTA  545

seq1  AGGATTGTGGAGAGAGCTAAGCCACTGGATGGTTTCCAACCCTCACTTTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGTGGAGAGAGCTAAGCCACTGGATGGTTTCCAACCCTCACTTTC  595

seq1  TGTGACTTGACTGACTAGATTTGCATTCCTGAATCTCTCCTTTAAAGGGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTTGACTGACTAGATTTGCATTCCTGAATCTCTCCTTTAAAGGGG  645

seq1  CCTTGGAATGTTGGGTCCTCTTTGTGGCTATACTTTGTTCAGTGGCCTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGAATGTTGGGTCCTCTTTGTGGCTATACTTTGTTCAGTGGCCTCT  695

seq1  TACCTGCTGCCTAAGTAGCCTGTCCTTCATTTACTTTGAATGAGGGTTAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGCTGCCTAAGTAGCCTGTCCTTCATTTACTTTGAATGAGGGTTAA  745

seq1  GTGGGGTGAGTGAGCAGTCTACAAGTTCCTCCCTTGCTTTTAGTTAGCAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTGAGTGAGCAGTCTACAAGTTCCTCCCTTGCTTTTAGTTAGCAG  795

seq1  CCAGATGATAACTCACAGATCTCCATCATTCTGACCATGCTGCCTTTACC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGATAACTCACAGATCTCCATCATTCTGACCATGCTGCCTTTACC  845

seq1  TCAGCACTGGGATCACAGATGAACACTGGGGCTCACTCAAACCCAGCCCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACTGGGATCACAGATGAACACTGGGGCTCACTCAAACCCAGCCCT  895

seq1  TCATTCCTCTAGGCCAACTGAGCTATCCCAGACCAGAAGCGAACTGCTGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCTCTAGGCCAACTGAGCTATCCCAGACCAGAAGCGAACTGCTGT  945

seq1  TTTTCAAGCATGTTGTTACACTTTTTGACTTTTCTTTTTCACTTGGGTGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAGCATGTTGTTACACTTTTTGACTTTTCTTTTTCACTTGGGTGT  995

seq1  CTGTGTCTGTGTGTGGGTTTGTGCACAGCAGTGTGAATTC  1037
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTGTGTGTGGGTTTGTGCACAGCAGTGTGAATTC  1035