BAC Information

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BAC

Clone NameB6Ng01-106L12
Chromosome14 (Build37)
Map Location 70,750,573 - 70,887,660
singlet/doubletdoublet
Overlap geneSlc39a14, EG668450, Piwil2, Polr3d, Phyhip, Bmp1
Upstream geneEG545808, Nkx2-6, Nkx3-1, Slc25a37, D930020E02Rik, Entpd4, Loxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik, LOC668397, Egr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc, LOC100043115
Downstream geneSftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2, LOC100043132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106L12.bB6Ng01-106L12.g
ACCDH914377DH914378
length1,108440
definitionDH914377|Mus musculus domesticus DNA, BAC clone: B6Ng01-106L12, 5' end.DH914378|Mus musculus domesticus DNA, BAC clone: B6Ng01-106L12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,750,573 - 70,751,689)(70,887,215 - 70,887,660)
sequence
gaattcagcgcggtgccacccttgcggttatccactcctgcccaagccaa
ccagaagaatcgggcatcactctccagccggagggtggtctggcgtgggg
cagggagaaggacacataggttcctgggatgcaagatccagacaccagag
cccccgagcagccgccaccgcagagcatctgatctacccatctactccgc
ttcctctgcgctctgtgtcctggggctctagaaagctcatctcagccttt
ctgagcagctatcgacctccccggcgtccttctctggttcacacatcccg
ggccctgcagctgaagggacagcgcagtgacctccttctcctcgccaccg
tggcacggcaatcaggtgctaccaggactgggctcagggagtgcgcggcc
tcccgaaaagactctgggtcctcggcgtgccggtgtctccaacccccacc
cggtgtcccccctaacccggaggcgcccgacttcccatcctgcctgcgcc
cggtccgtcctcacctgaagtcctccagccggcagtcgggcccacgcagc
ctcactatccagggccccccccccaaggcagcgggcgacacagctactga
gtgggtgcgtccccgccaacagccacgcgccccctctctacgtccggccc
ccgccgcatgcgcatgcccggccatataccctgcgcgtcaccgctgggcc
cgcccccgcctgctgccccgccccgctcccccgggcctgccacgtgggac
cgccagctaacagcgtcgttaccctggccaacctggtcctccagcgttgt
gcatccccggctcgcatcctagctctctctagcttcatccacccttcctt
gatgaattccatccttgactcacggaggccctgcaggctccgctattctc
tggaaacctcccatctgtccttcctagccccttttgtgggaaactcacag
cgtgaccttccatcctgtcgctctgaggagaagtgcccctctcttggtag
acatttgtggttttaacactgtgatgaatctaagaagacttttctgtttc
tcatctaaaatatctgtaagcagatggagcgctcataactgctttttttt
tttttttt
tgggtgtaattgggatccacacacttgtcctgagtgcctgctcctatgct
aggcacgtgggcttagaacaatggtgtggcacacagaagtctgtaactgt
gtgcctgtgtgtgcctgtcagcatgcgagcagctctacgtgaaatgccca
catgatgggcttgaacacactctgcatatatgtgtgtctgaattcacttt
gggtccttgtgtcaccgtgtatgcaggtttctccgtcttcctatatgtgt
ctgctcctgcccgtgcgtttctctctctgtatgcttccacacacatatag
agtaggtcacatgggtcttgtgtgtacacccacacacagatggttgtgtg
tgcatgactatggctttgtgtctgagccttcgtggtatactataggtgtc
tgcctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_70750573_70751689
seq2: B6Ng01-106L12.b_46_1153

seq1  GAATTCAGCGCGGTGCCACCCTTGCGGTTATCCACTCCTGCCCAAGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCGCGGTGCCACCCTTGCGGTTATCCACTCCTGCCCAAGCCAA  50

seq1  CCAGAAGAATCGGGCATCACTCTCCAGCCGGAGGGTGGTCTGGCGTGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGAATCGGGCATCACTCTCCAGCCGGAGGGTGGTCTGGCGTGGGG  100

seq1  CAGGGAGAAGGACACATAGGTTCCTGGGATGCAAGATCCAGACACCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGAAGGACACATAGGTTCCTGGGATGCAAGATCCAGACACCAGAG  150

seq1  CCCCCGAGCAGCCGCCACCGCAGAGCATCTGATCTACCCATCTACTCCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCGAGCAGCCGCCACCGCAGAGCATCTGATCTACCCATCTACTCCGC  200

seq1  TTCCTCTGCGCTCTGTGTCCTGGGGCTCTAGAAAGCTCATCTCAGCCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGCGCTCTGTGTCCTGGGGCTCTAGAAAGCTCATCTCAGCCTTT  250

seq1  CTGAGCAGCTATCGACCTCCCCGGCGTCCTTCTCTGGTTCACACATCCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCAGCTATCGACCTCCCCGGCGTCCTTCTCTGGTTCACACATCCCG  300

seq1  GGCCCTGCAGCTGAAGGGACAGCGCAGTGACCTCCTTCTCCTCGCCACCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGCAGCTGAAGGGACAGCGCAGTGACCTCCTTCTCCTCGCCACCG  350

seq1  TGGCACGGCAATCAGGTGCTACCAGGACTGGGCTCAGGGAGTGCGCGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACGGCAATCAGGTGCTACCAGGACTGGGCTCAGGGAGTGCGCGGCC  400

seq1  TCCCGAAAAGACTCTGGGTCCTCGGCGTGCCGGTGTCTCCAACCCCCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGAAAAGACTCTGGGTCCTCGGCGTGCCGGTGTCTCCAACCCCCACC  450

seq1  CGGTGTCCCCCCTAACCCGGAGGCGCCCGACTTCCCATCCTGCCTGCGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGTCCCCCCTAACCCGGAGGCGCCCGACTTCCCATCCTGCCTGCGCC  500

seq1  CGGTCCGTCCTCACCTGAAGTCCTCCAGCCGGCAGTCGGGCCCACGCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCCGTCCTCACCTGAAGTCCTCCAGCCGGCAGTCGGGCCCACGCAGC  550

seq1  CTCACTATCCAGGGCCCCCCCCCCAAGGCAGCGGGCGACACAGCTACTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTATCCAGGGCCCCCCCCCCAAGGCAGCGGGCGACACAGCTACTGA  600

seq1  GTGGGTGCGTCCCCGCCAACAGCCACGCGCCCCCTCTCTACGTCCGGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGCGTCCCCGCCAACAGCCACGCGCCCCCTCTCTACGTCCGGCCC  650

seq1  CCGCCGCATGCGCATGCCCGGCCATATACCCTGCGCGTCACCGCTGGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCGCATGCGCATGCCCGGCCATATACCCTGCGCGTCACCGCTGGGCC  700

seq1  CGCCCCCGCCTGCTGCCCCGCCCCGCTCCCCCGGGCCTGCCACGTGGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCCGCCTGCTGCCCCGCCCCGCTCCCCCGGGCCTGCCACGTGGGAC  750

seq1  CGCCAGCTAACAGCGTCGTTACCCTGGCCAACCTGGTCCTCCAGCGTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAGCTAACAGCGTCGTTACCCTGGCCAACCTGGTCCTCCAGCGTTGT  800

seq1  GCATCCCCGGCTCGCATCCTAGCTCTCTCTAGCTTCATCCACCCTTCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCCGGCTCGCATCCTAGCTCTCTCTAGCTTCATCCACCCTTCCTT  850

seq1  GATGAATTCCATCCTTGACTCACGGAGGCCCTGCAGGCTCCGCTATTCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATTCCATCCTTGACTCACGGAGGCCCTGCAGGCTCCGCTATTCTC  900

seq1  TGGAAACCTCCCATCTGTCCTTCCTAGCCCCTTTTGTGGGAAACTCACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACCTCCCATCTGTCCTTCCTAGCCCCTTTTGTGGGAAACTCACAG  950

seq1  CGTGACCTTCCATCCTGTCGCTCCTGAGGGAGAGTGCCCCTCTCTTGGTA  1000
      |||||||||||||||||||||| ||||||   ||||||||||||||||||
seq2  CGTGACCTTCCATCCTGTCGCT-CTGAGGAGAAGTGCCCCTCTCTTGGTA  999

seq1  GACATTTGTGGTTTTAACACTGTTGATGAATCTAAG-AGACTTTTCTGTT  1049
      |||||||||||||||||||||| ||||||||||||| ||||||||||| |
seq2  GACATTTGTGGTTTTAACACTG-TGATGAATCTAAGAAGACTTTTCTG-T  1047

seq1  TTCTCCAATTCTAAAATATTCTGTAAGCAGGATGGAGCGCTTCATAAACT  1099
      |||||    ||||||||| |||||||||| |||||||||| |||| ||||
seq2  TTCTC---ATCTAAAATA-TCTGTAAGCA-GATGGAGCGC-TCAT-AACT  1090

seq1  GCTTTTTTTTTTTTTTTT  1117
      ||||||||||||||||||
seq2  GCTTTTTTTTTTTTTTTT  1108

seq1: chr14_70887215_70887660
seq2: B6Ng01-106L12.g_68_513 (reverse)

seq1  CACACACACACACACACACACACACACACACACAGAGGCAGACACCTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACAGAGGCAGACACCTATA  50

seq1  GTATACCACGAAGGCTCAGACACAAAGCCATAGTCATGCACACACAACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACCACGAAGGCTCAGACACAAAGCCATAGTCATGCACACACAACCA  100

seq1  TCTGTGTGTGGGTGTACACACAAGACCCATGTGACCTACTCTATATGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTGGGTGTACACACAAGACCCATGTGACCTACTCTATATGTGT  150

seq1  GTGGAAGCATACAGAGAGAGAAACGCACGGGCAGGAGCAGACACATATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGCATACAGAGAGAGAAACGCACGGGCAGGAGCAGACACATATAG  200

seq1  GAAGACGGAGAAACCTGCATACACGGTGACACAAGGACCCAAAGTGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACGGAGAAACCTGCATACACGGTGACACAAGGACCCAAAGTGAATT  250

seq1  CAGACACACATATATGCAGAGTGTGTTCAAGCCCATCATGTGGGCATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACACATATATGCAGAGTGTGTTCAAGCCCATCATGTGGGCATTTC  300

seq1  ACGTAGAGCTGCTCGCATGCTGACAGGCACACACAGGCACACAGTTACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAGAGCTGCTCGCATGCTGACAGGCACACACAGGCACACAGTTACAG  350

seq1  ACTTCTGTGTGCCACACCATTGTTCTAAGCCCACGTGCCTAGCATAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGTGTGCCACACCATTGTTCTAAGCCCACGTGCCTAGCATAGGAG  400

seq1  CAGGCACTCAGGACAAGTGTGTGGATCCCAATTACACCCAGAATTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACTCAGGACAAGTGTGTGGATCCCAATTACACCCAGAATTC  446