BAC Information

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BAC

Clone NameB6Ng01-108P06
Chromosome14 (Build37)
Map Location 36,916,646 - 36,917,696
singlet/doubletsinglet
Overlap genenone
Upstream geneGrid1, 4930596D02Rik, LOC100040277, LOC665933, 4930474N05Rik
Downstream geneGcap14, LOC100040341, LOC670331, Rgr, Lrrc21, Lrrc22, Pcdh21, 2610528A11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108P06.bB6Ng01-108P06.g
ACCDH915999DH916000
length1,2261,046
definitionDH915999|Mus musculus domesticus DNA, BAC clone: B6Ng01-108P06, 5' end.DH916000|Mus musculus domesticus DNA, BAC clone: B6Ng01-108P06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttcctttcctgtctcctactttactctgtatttcagagggtga
catttcccaggcttccttgcctgatggcattctttagtaagtcttatgta
ataaaaacttcctttaaaaatatacagccagcacgccagcactgggttgg
cttgggtgcggtgtctgtggacacctgcaaggtacccacaggaccctgca
cagtatcttaagacctctggtgagtggaacacagcttctgctccaatcca
attgctcgggacctgagactgcattaattagggaagcagaaaacccgggc
tgatcaggggcacaagtcccttccggtccatgccagcaccgggatacctt
gggcatggaggctgtggacacccgcaagatacccacaggaccctccatgg
gatcttaagacctctgtgagtggatcaaaacttctgccaggaggcaggtt
cgaacaccagatatctgggaaccttccctgcaagaaaagagcttacctgc
agagactactctgcacactgaaactcaggatagagctagtctcccaggtc
tgctgatagaggctaacataatcacctgaggaacaagctctaaccagaga
caactacaaaaactaactccagagattaccagatggcgaaaggcaaacgt
aagaatcttactaacagaaacaaagaccactcaccatcatcagaatgcaa
cactcccacccgaccaagtcctgggcaccccaaaaacacccgaaaagcta
gacccggatttaaaagcatatctcattatgatggtagaggacattaagaa
ggactttaataacgcacttaaagaaatacaggcgaacactgctaacaggt
agaagaccttaaagaggaagcacaaaaatcccttaaagaattgcaggaaa
acacgaccaaacaggtgatggaattgaataaaaacatccagacctaaaaa
gggaagtagacacataagaaactcaaagtgagcaacgctggaaatagaaa
cctaggaacaaatctgaccatagatgcgagcatcagcacagattcagaga
tagaagagagaaactcatgtgcagaagatcatagagaacatggcacacaa
tcaaagaaatgaaatgcaaaggatcctactcaagattcagaattcggact
tgatgagtggacaccatggcatatggattatggaattgagattccattaa
gtctgcaaatcctccacaatatgtgg
gaattcaggaaatcattgatgatctgcccttgtagttagtgttaagctca
accttctttggtcagagaagcttctgtttgtaatggcaattatttaatgc
agtgtttcacagctggtcagtgtgtggagaataagtggctattgggttct
cagccctaagtgggacatctccattacctatttgaaggctactgcaaaat
tctgtcttctggatgggacatggttgtcttactcatgttcagtactaaat
actccatgagtttgcagaaggatctcagtgagctccatgcctccgtggga
gctaggggtagccaatggctgctgagaatgggtgagtcatacttctcatt
caatggtaaaatgtccattaaaatgctcctgtgaatagctccccaactat
acttatgcaagcaacccgaactatgtgcagtggagtacactgtaaaccac
aaaccacaaggcaggatgatggggacttgaagaaaagaaaggattcaaca
aaacaaaatggggaataagtagataaagggataactatgatcaaaatgtg
tgcacacacttgcacacgagggcacatgagcacacaagaatgcgcacacc
tataccacatacaaaaaaaaaaaaaaaaaaacaaaaaaaaaacatacaga
tgaagttgttaaggaataaagagagtagaaatgtgaagatacttgaaatg
catttaaaccagacagtcagttaataaacagaatatggcatagccacata
ctggatgacctgtaataacaagggaaggtgttagatatcattatactgag
agaaaagctcaccacaaaaaccacatactgcatgttttcatgtatatgaa
atgcaactgggcaaatatataaacactagctattttctacatagggatta
ggtggagatttgggaaatgactgttgctttatgagatgaaagaaattcta
aagattattttgatgtctgtctattgtctatgaatataaattaacaactg
atctttctcatgactgatttcccctcctcctatcttttgatttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_36916646_36917696
seq2: B6Ng01-108P06.g_66_1111

seq1  GAATTCAGGAAATCATTGATGATCTGCCCTTGTAGTTAGTGTTAAGCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAATCATTGATGATCTGCCCTTGTAGTTAGTGTTAAGCTCA  50

seq1  ACCTTCTTTGGTCAGAGAAGCTTCTGTTTGTAATGGCAATTATTTAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTTTGGTCAGAGAAGCTTCTGTTTGTAATGGCAATTATTTAATGC  100

seq1  AGTGTTTCACAGCTGGTCAGTGTGTGGAGAATAAGTGGCTATTGGGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTCACAGCTGGTCAGTGTGTGGAGAATAAGTGGCTATTGGGTTCT  150

seq1  CAGCCCTAAGTGGGACATCTCCATTACCTATTTGAAGGCTACTGCAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTAAGTGGGACATCTCCATTACCTATTTGAAGGCTACTGCAAAAT  200

seq1  TCTGTCTTCTGGATGGGACATGGTTGTCTTACTCATGTTCAGTACTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTTCTGGATGGGACATGGTTGTCTTACTCATGTTCAGTACTAAAT  250

seq1  ACTCCATGAGTTTGCAGAAGGATCTCAGTGAGCTCCATGCCTCCGTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATGAGTTTGCAGAAGGATCTCAGTGAGCTCCATGCCTCCGTGGGA  300

seq1  GCTAGGGGTAGCCAATGGCTGCTGAGAATGGGTGAGTCATACTTCTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGGGTAGCCAATGGCTGCTGAGAATGGGTGAGTCATACTTCTCATT  350

seq1  CAATGGTAAAATGTCCATTAAAATGCTCCTGTGAATAGCTCCCCAACTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGTAAAATGTCCATTAAAATGCTCCTGTGAATAGCTCCCCAACTAT  400

seq1  ACTTATGCAAGCAACCCGAACTATGTGCAGTGGAGTACACTGTAAACCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATGCAAGCAACCCGAACTATGTGCAGTGGAGTACACTGTAAACCAC  450

seq1  AAACCACAAGGCAGGATGATGGGGACTTGAAGAAAAGAAAGGATTCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACAAGGCAGGATGATGGGGACTTGAAGAAAAGAAAGGATTCAACA  500

seq1  AAACAAAATGGGGAATAAGTAGATAAAGGGATAACTATGATCAAAATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAATGGGGAATAAGTAGATAAAGGGATAACTATGATCAAAATGTG  550

seq1  TGCACACACTTGCACACGAGGGCACATGAGCACACAAGAATGCGCACACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACACTTGCACACGAGGGCACATGAGCACACAAGAATGCGCACACC  600

seq1  TATACCACATACAAAAAAAAAAAAAAAAAAAACAAAAAAAAAACATACAG  650
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TATACCACATAC-AAAAAAAAAAAAAAAAAAACAAAAAAAAAACATACAG  649

seq1  ATGAAGTTGTTAAGGAATAAAGAGAGTAGAAATGTGAAGATACTTGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTTGTTAAGGAATAAAGAGAGTAGAAATGTGAAGATACTTGAAAT  699

seq1  GCATTTAAACCAGACAGTCAGTTAATAAACAGAATATGGCATAGCCACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTAAACCAGACAGTCAGTTAATAAACAGAATATGGCATAGCCACAT  749

seq1  ACTGGATGACCTGTAATAACAAGGGAAGGTGTTAGATATCATTATACTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATGACCTGTAATAACAAGGGAAGGTGTTAGATATCATTATACTGA  799

seq1  GAGAAAAAGCTCACCACAAAAAACCACATACTGCATGTTTTCATGTATAT  850
      ||| ||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAG-AAAAGCTCACCAC-AAAAACCACATACTGCATGTTTTCATGTATAT  847

seq1  GAAATGCAACTGGGCAAATATATAAACACTAGCCTATTTCTACATAGGGA  900
      |||||||||||||||||||||||||||||||||   ||||||||||||||
seq2  GAAATGCAACTGGGCAAATATATAAACACTAGCTATTTTCTACATAGGGA  897

seq1  -TAGGTGGAGATATGGGAAATGACTGTTGC-TTATGAGAATGACAGAAAT  948
       ||||||||||| ||||||||||||||||| ||||||| |||| ||||||
seq2  TTAGGTGGAGATTTGGGAAATGACTGTTGCTTTATGAG-ATGAAAGAAAT  946

seq1  TCTAAAAGATTATTTTGATGTCTGTCTATATGTTTATGAATATAAATAAA  998
      ||| ||||||||||||||||||||||||| ||| ||||||||||||| ||
seq2  TCT-AAAGATTATTTTGATGTCTGTCTAT-TGTCTATGAATATAAATTAA  994

seq1  CAAACTGATCTTTCTCCATGACTGTATTTCCCTTCTTTCTTATCTTT---  1045
      | ||||||||||||| |||||||| ||||||| ||  || |||||||   
seq2  C-AACTGATCTTTCT-CATGACTG-ATTTCCCCTC-CTCCTATCTTTTGA  1040

seq1  TTTGTT  1051
      ||||||
seq2  TTTGTT  1046