BAC Information

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BAC

Clone NameB6Ng01-109J18
Chromosome14 (Build37)9 (Build37)
Map Location 84,410,643 - 84,410,710106,371,465 - 106,371,582
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776
Downstream geneLOC100043280, LOC100043285, Pcdh17, 9630013A20Rik, LOC629794
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109J18.bB6Ng01-109J18.g
ACCDH916473DH916474
length413118
definitionDH916473|Mus musculus domesticus DNA, BAC clone: B6Ng01-109J18, 5' end.DH916474|Mus musculus domesticus DNA, BAC clone: B6Ng01-109J18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(84,410,643 - 84,410,710)(106,371,465 - 106,371,582)
sequence
gaattcaacgttgtgagcctccgcagtaacagtgcccactgcacaaacga
agcttctctgaacaaagctgactgcagccgtgatctaagagcacaagtgg
aacgattcagaaagcagatcccaggtgcatcatgtcattcagcaagacaa
cagcaggcgcttcccctcctaggaccttgggacctctccagtcacaggtc
aggtctgtagaagcctcccatggatcacacctcaaattcaagaagaaagt
cgttggctaacttcttaacagtcatgccacttgttagcaagttagcattc
cttctaggctctgcccagttacctagcaacagccaggtaggagcctggct
tgctattaaaaaaagctgttctctctctctctctctctctctctctctct
ctctctctctctc
tttgtagtgagtgtatatgcctgtgtaaatgtgcaaaggattgtaagatg
ataagccaaaactcagggcagtgggctccctccagcaggtgaggggagtg
aggagaggggaaggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_84410643_84410710
seq2: B6Ng01-109J18.b_410_457 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50
                          ||||||||||||||||||||||||||||||
seq2  --------------------GAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  30

seq1  GAAAGAGAGAGAGAACAG  68
      || |||||||||||||||
seq2  GAGAGAGAGAGAGAACAG  48

seq1: chr9_106371465_106371582
seq2: B6Ng01-109J18.g_72_189

seq1  TTTGTAGTGAGTGTATATGCCTGTGTAAATGTGCAAAGGATTGTAAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGTGAGTGTATATGCCTGTGTAAATGTGCAAAGGATTGTAAGATG  50

seq1  ATAAGCCAAAACTCAGGGCAGTGGGCTCCCTCCAGCAGGTGAGGGGAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCAAAACTCAGGGCAGTGGGCTCCCTCCAGCAGGTGAGGGGAGTG  100

seq1  AGGAGAGGGGAAGGGGAG  118
      ||||||||||||||||||
seq2  AGGAGAGGGGAAGGGGAG  118