BAC Information

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BAC

Clone NameB6Ng01-110E21
Chromosome14 (Build37)
Map Location 81,586,059 - 81,729,714
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC672828
Downstream geneLOC639207
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110E21.bB6Ng01-110E21.g
ACCDH916963DH916964
length1,0691,136
definitionDH916963|Mus musculus domesticus DNA, BAC clone: B6Ng01-110E21, 5' end.DH916964|Mus musculus domesticus DNA, BAC clone: B6Ng01-110E21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,586,059 - 81,587,147)(81,728,579 - 81,729,714)
sequence
gaattcaagatctactgatttcaaaggacaaaataatgctgtcatttcag
atgtttcataataatttttagagaggatttccctagttaaaacaaacaaa
tgattttgcaaggtaaactccaaacctatacatttaatatagtttcttat
tcttttttttcccatggtgattgactacgacgtggtaaaaaatctagggg
catgatctagcaaaaactacaaatcctattctgcttactgatttttacaa
agacttttatatgtcagtaaacattcatacacaaagtgtcacatttacag
caagggattatttaaatgagtaaatgtgctttagaagacctgaacttctt
catctattcaattggtaggaatgccagctccatcacacgtaattttcctc
gtcagaaaatagtgattgcctagaaagcacttgacttcattcaccacttc
ttcatgtttgagcataaatgacactagttcaattcctctttttgcaattc
taattacatatataattttcttgagatagtgaacattattttcattataa
atatgtaagtattatcttcaatttttactgtcatcctaaataagatatag
cacaaaagtattttaagtatattatctcattcgtctatctttacctataa
ctatgaacaatcatattgatagatgaaaaattacaacaagcaaataatca
ttaaagtattattgcttccttaagtaccttatttgcagtaacttcaaaaa
aatgaattattgctatgtgtttaaaaatgtaatgtattaataatttgttt
tacatggggaacaaaatctcttctttttacaaaccagatgaagtcatatg
gaaagccactgtgattctctgtgaaattaaatctgttttgcatttctttg
gcttcattttaaagagatttttagcactctacacagtgaaccctcaatac
atgtattccccagtgtatatctagtaccattttcacttctcagatcagat
aatgtggtgaaatatgaatgaactgtgacagaaaactaagattgaaatgt
tacataagaacaaggcatg
gaattcatatttttaaaaatatattcatgacagttaatggaaggagtagt
tacttttgaggttacttaaagtaaaattggatacattttgttaattatag
aaatagatgttttacagggtgtatgatgaccactgaattcttaccccatg
ttataaaagcttgaaatagagaaataacggcacttaaaactgaaagatga
gtcatattcccatgatgagactacatgctagtctaccttactatttgctc
atttcattgatatgctatgacactattccctagatagcctcagtattcac
gaatgagctatcactgaaaattcaacacggaagatggtgtctcatgaaga
taatcaatgaaaaattactggcaacttttttaatcagataattcaaagat
cataaaggacacctaaaatatacattgctccaaggaaactgttatgctgt
tcggtgctgggtaccaacccctaagtttggtcaatcaaaatactcctttt
cggattctgtgaataacatcacagcattacttacaaccaacagtgccgta
tgtttatccaccagcctcattgggaggagtcaggaagattacaccacagt
tctatactccataacctagtctgattccttcaaagtcaaactgaaagaaa
acagatagactaagaggcaaatgattaagtggatataagaaggaaaaaaa
atgcaaaacaagccaaaacatgaagaaggactcttgctgacctgctgcca
gtaaggaaatttctggcaccaggcaaaatttctcactgaacaatggggat
tttacaaagacatctagtcaaagacagcaaataaatcaggtttactaaaa
gtcaaagataatagacagccttcagtatcaatgactccttctctctatta
atctaagcaataactcacataaatctaccgtacaattttggttgtagaag
aaaaacgtctttacttttaaccttggtgtaaacttcatccctagcaatgc
taactgcacaatagggaggctgggtcttaggaggccttaagagacattag
caagagatctatatgtttcatggtaagacctctctttgagagaggcctac
tctggcacacaagatatattttctttttctgagtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_81586059_81587147
seq2: B6Ng01-110E21.b_42_1110

seq1  GAATTCAAGATCTACTGATTTCAAAGGACAAAATAATGCTGTCATTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGATCTACTGATTTCAAAGGACAAAATAATGCTGTCATTTCAG  50

seq1  ATGTTTCATAATAATTTTTAGAGAGGATTTCCCTAGTTAAAACAAACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCATAATAATTTTTAGAGAGGATTTCCCTAGTTAAAACAAACAAA  100

seq1  TGATTTTGCAAGGTAAACTCCAAACCTATACATTTAATATAGTTTCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTGCAAGGTAAACTCCAAACCTATACATTTAATATAGTTTCTTAT  150

seq1  TCTTTTTTTTCCCATGGTGATTGACTACGACGTGGTAAAAAATCTAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTCCCATGGTGATTGACTACGACGTGGTAAAAAATCTAGGGG  200

seq1  CATGATCTAGCAAAAACTACAAATCCTATTCTGCTTACTGATTTTTACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATCTAGCAAAAACTACAAATCCTATTCTGCTTACTGATTTTTACAA  250

seq1  AGACTTTTATATGTCAGTAAACATTCATACACAAAGTGTCACATTTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTTATATGTCAGTAAACATTCATACACAAAGTGTCACATTTACAG  300

seq1  CAAGGGATTATTTAAATGAGTAAATGTGCTTTAGAAGACCTGAACTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGATTATTTAAATGAGTAAATGTGCTTTAGAAGACCTGAACTTCTT  350

seq1  CATCTATTCAATTGGTAGGAATGCCAGCTCCATCACACGTAATTTTCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATTCAATTGGTAGGAATGCCAGCTCCATCACACGTAATTTTCCTC  400

seq1  GTCAGAAAATAGTGATTGCCTAGAAAGCACTTGACTTCATTCACCACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAAATAGTGATTGCCTAGAAAGCACTTGACTTCATTCACCACTTC  450

seq1  TTCATGTTTGAGCATAAATGACACTAGTTCAATTCCTCTTTTTGCAATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTTTGAGCATAAATGACACTAGTTCAATTCCTCTTTTTGCAATTC  500

seq1  TAATTACATATATAATTTTCTTGAGATAGTGAACATTATTTTCATTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACATATATAATTTTCTTGAGATAGTGAACATTATTTTCATTATAA  550

seq1  ATATGTAAGTATTATCTTCAATTTTTACTGTCATCCTAAATAAGATATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAAGTATTATCTTCAATTTTTACTGTCATCCTAAATAAGATATAG  600

seq1  CACAAAAGTATTTTAAGTATATTATCTCATTCGTCTATCTTTACCTATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAAGTATTTTAAGTATATTATCTCATTCGTCTATCTTTACCTATAA  650

seq1  CTATGAACAATCATATTGATAGATGAAAAATTACAACAAGCAAATAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAACAATCATATTGATAGATGAAAAATTACAACAAGCAAATAATCA  700

seq1  TTAAAGTATTATTGCTTCCTTAAGTACCTTATTTGCAGTAACTTCAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTATTATTGCTTCCTTAAGTACCTTATTTGCAGTAACTTCAAAAA  750

seq1  AATGAATTATTGCTATGTGTTTAAAAATGTAATGTATTAATAATTTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATTATTGCTATGTGTTTAAAAATGTAATGTATTAATAATTTGTTT  800

seq1  TACATGGGGAACAAAATCTCTTCTTTTTACAAACCAGATGAAGTCATATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGGGAACAAAATCTCTTCTTTTTACAAACCAGATGAAGTCATATG  850

seq1  GAAAGCCACTGTGATTCTCTGTGAAATTAAATCTGTTTTGCATTTCTTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCACTGTGATTCTCTGTGAAATTAAATCTGTTTTGCATTTCTTTG  900

seq1  GCTTCATTTTAAAGAGATTTTTAAGCACTCTACACAGTGAACCCTCAATA  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCTTCATTTTAAAGAGATTTTT-AGCACTCTACACAGTGAACCCTCAATA  949

seq1  CATGTTATTTCCCCAAGTTGTAATATTCTAAGTACCATTTTCCACTTCTC  1000
      |||||   |||||||   ||| ||| ||| ||||||||||| ||||||| 
seq2  CATGT--ATTCCCCA--GTGT-ATA-TCT-AGTACCATTTT-CACTTCT-  990

seq1  CAGAATCAGATAATTGGTGTGAAATATGAATTTAAACTGTGAACAGAAAA  1050
      ||| ||||||||| ||  ||||||||||||  | ||||||| ||||||||
seq2  CAG-ATCAGATAA-TGTGGTGAAATATGAA--TGAACTGTG-ACAGAAAA  1035

seq1  CTAAAGATTGAAATGTTTACCAATAGAAG-ACAAGGCATG  1089
      || ||||||||||||||     | | ||| ||||||||||
seq2  CT-AAGATTGAAATGTT-----ACATAAGAACAAGGCATG  1069

seq1: chr14_81728579_81729714
seq2: B6Ng01-110E21.g_64_1199 (reverse)

seq1  GGACTCAGAAAAAAGAAAATATATCTGGTG-GCAAGAGTGAGGGCT-TCT  48
      |||||||| ||||||||||||||||| ||| || ||||| ||| || |||
seq2  GGACTCAG-AAAAAGAAAATATATCTTGTGTGCCAGAGT-AGGCCTCTCT  48

seq1  CAAGGGAGAGTCTTTACAATG-AACATATAGGATCTC-TGCTAATGTCTC  96
      |||  |||||   |||| ||| |||||||| |||||| ||||||||||||
seq2  CAA-AGAGAGGTCTTACCATGAAACATATA-GATCTCTTGCTAATGTCTC  96

seq1  TAAAGG-CTCCTAAGA-CCAGCCT-CCTA-TGTGCAGTTTTAAGCATTGC  142
      | |||| ||||||||| ||||||| |||| |||||||||   ||||||||
seq2  TTAAGGCCTCCTAAGACCCAGCCTCCCTATTGTGCAGTT---AGCATTGC  143

seq1  TAAGGGATGAAGTTTACAACAAGGTTAAAAGTAAAGACGTTTTTCTTCTA  192
      | |||||||||||||||| |||||||||||||||||||||||||||||||
seq2  T-AGGGATGAAGTTTACACCAAGGTTAAAAGTAAAGACGTTTTTCTTCTA  192

seq1  CAAACAAAATTGTACGGTAGATTTATGTGAGTTATTGCTTAGATTAATAG  242
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAAAATTGTACGGTAGATTTATGTGAGTTATTGCTTAGATTAATAG  242

seq1  AGAGAAGGGAGTCATTGATACTGAAGGCTGTCTATTATCTTTGACTTTTA  292
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAA-GGAGTCATTGATACTGAAGGCTGTCTATTATCTTTGACTTTTA  291

seq1  GTAAACCTGATTTATTTGCTGTCTTTGACTAGATGTCTTTGTAAAAT-CC  341
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTAAACCTGATTTATTTGCTGTCTTTGACTAGATGTCTTTGTAAAATCCC  341

seq1  CATTGTTCAGTGAGAAATTTTGCCTGGTGCCAGAAATTTCCTTACTGGCA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTCAGTGAGAAATTTTGCCTGGTGCCAGAAATTTCCTTACTGGCA  391

seq1  GCAGGTCAGCAAGAGTCCTTCTTCATGTTTTGGCTTGTTTTGCATTTTTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCAGCAAGAGTCCTTCTTCATGTTTTGGCTTGTTTTGCATTTTTT  441

seq1  TTCCTTCTTATATCCACTTAATCATTTGCCTCTTAGTCTATCTGTTTTCT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTTATATCCACTTAATCATTTGCCTCTTAGTCTATCTGTTTTCT  491

seq1  TTCAGTTTGACTTTGAAGGAATCAGACTAGGTTATGGAGTATAGAACTGT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTTGACTTTGAAGGAATCAGACTAGGTTATGGAGTATAGAACTGT  541

seq1  GGTGTAATCTTCCTGACTCCTCCCAATGAGGCTGGTGGATAAACATACGG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAATCTTCCTGACTCCTCCCAATGAGGCTGGTGGATAAACATACGG  591

seq1  CACTGTTGGTTGTAAGTAATGCTGTGATGTTATTCACAGAATCCGAAAAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTGGTTGTAAGTAATGCTGTGATGTTATTCACAGAATCCGAAAAG  641

seq1  GAGTATTTTGATTGACCAAACTTAGGGGTTGGTACCCAGCACCGAACAGC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTTTGATTGACCAAACTTAGGGGTTGGTACCCAGCACCGAACAGC  691

seq1  ATAACAGTTTCCTTGGAGCAATGTATATTTTAGGTGTCCTTTATGATCTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAGTTTCCTTGGAGCAATGTATATTTTAGGTGTCCTTTATGATCTT  741

seq1  TGAATTATCTGATTAAAAAAGTTGCCAGTAATTTTTCATTGATTATCTTC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTATCTGATTAAAAAAGTTGCCAGTAATTTTTCATTGATTATCTTC  791

seq1  ATGAGACACCATCTTCCGTGTTGAATTTTCAGTGATAGCTCATTCGTGAA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACACCATCTTCCGTGTTGAATTTTCAGTGATAGCTCATTCGTGAA  841

seq1  TACTGAGGCTATCTAGGGAATAGTGTCATAGCATATCAATGAAATGAGCA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGGCTATCTAGGGAATAGTGTCATAGCATATCAATGAAATGAGCA  891

seq1  AATAGTAAGGTAGACTAGCATGTAGTCTCATCATGGGAATATGACTCATC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAAGGTAGACTAGCATGTAGTCTCATCATGGGAATATGACTCATC  941

seq1  TTTCAGTTTTAAGTGCCGTTATTTCTCTATTTCAAGCTTTTATAACATGG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTTTAAGTGCCGTTATTTCTCTATTTCAAGCTTTTATAACATGG  991

seq1  GGTAAGAATTCAGTGGTCATCATACACCCTGTAAAACATCTATTTCTATA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGAATTCAGTGGTCATCATACACCCTGTAAAACATCTATTTCTATA  1041

seq1  ATTAACAAAATGTATCCAATTTTACTTTAAGTAACCTCAAAAGTAACTAC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACAAAATGTATCCAATTTTACTTTAAGTAACCTCAAAAGTAACTAC  1091

seq1  TCCTTCCATTAACTGTCATGAATATATTTTTAAAAATATGAATTC  1136
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCATTAACTGTCATGAATATATTTTTAAAAATATGAATTC  1136