BAC Information

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BAC

Clone NameB6Ng01-110H15
Chromosome14 (Build37)
Map Location 86,545,570 - 86,706,986
singlet/doubletdoublet
Overlap geneLOC100043301, EG629815
Upstream geneLOC668603
Downstream geneLOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3, EG665324
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110H15.bB6Ng01-110H15.g
ACCDH917089DH917090
length872181
definitionDH917089|Mus musculus domesticus DNA, BAC clone: B6Ng01-110H15, 5' end.DH917090|Mus musculus domesticus DNA, BAC clone: B6Ng01-110H15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,545,570 - 86,546,496)(86,706,806 - 86,706,986)
sequence
gaattccaggacagccaggcctgcacagagaaaccctgtctctaaaaacc
aaaaaaaggaaaaaaaaaaaaaaaaaaaaaaaaaagaaagaaagaaagga
aggaattaaggaagaaaggaaggaaggaaggaaggaaggaaggaaggaag
gaaggaaggaagacagacagacagacagacagacagacagaaagaaagaa
agaaagaaagaaagaaagaaagaaagacagaaagacagaaagacagaaag
acagaaagacagaaagacagaaagacagaaagagaaagaatcaactcctt
gtatttctctctcctcatcttgatccagcctagggatggcatgaggcaag
tgggaaagaaggagaagcacagtagcatttctcacttgtagtcttcatca
gtgtttgcaggagaccgagcagatgccccacactctggggaggtgtagaa
cagagatttttctcatgccaggattctgccttgaaccagattaagactac
atcaacagctttgtctgttaagttagagaccactgtctttagaacctggc
aggctcctgcctagccaagcagatagtagctggcatatgttttcatagca
tggaacattccagcgccatgtagtccagcaacagcagcaacaagaaggca
acagtattatatgcagaagcggctcaagagaatgtgatggtgttgagtat
agcaggagagaggtgacttcatggcctcacactggcagatcgtcaccacc
agaatgatgctatggtaccacatgaatgaacctagtagctgaacgactta
aattaactattagtaattaatctctgtcagtatccgagctcattccgtgc
gttacaactgatctatctcatc
cagaggaaaatgaaagttgagggaaaaaagaaaaccctttttattaatca
cacattagatagttctgagggaataactgatccccacattagaattaact
tttaaaaattgcatttatttgtgtgtgtttgtctgcattcgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86545570_86546496
seq2: B6Ng01-110H15.b_44_915

seq1  GAATTCCAGGACAGCCAGGCCTGCACAGAGAAACCCTGTCTCTAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGCCTGCACAGAGAAACCCTGTCTCTAAAAACC  50

seq1  AAAAAAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGG  100
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGG-AAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAGAAAGG  99

seq1  AAGGAATTAAGGAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATTAAGGAAGAAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  149

seq1  GGAAGGAAGGAAGACAGACAGACAGACAGACAGACAGACAGAAAGAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAGGAAGACAGACAGACAGACAGACAGACAGACAGAAAGAAAGA  199

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAGACAGAAAGACAGAAAGACAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAGACAGAAAGACAGAAAGACAGAAA  249

seq1  GACAGAAAGACAGAAAGACAGAAAGACAGAAAGAGAAAGAATCAACTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAAGACAGAAAGACAGAAAGACAGAAAGAGAAAGAATCAACTCCT  299

seq1  TGTATTTCTCTCTCCTCATCTTGATCCAGCCTAGGGATGGCATGAGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCTCTCTCCTCATCTTGATCCAGCCTAGGGATGGCATGAGGCAA  349

seq1  GTGGGAAAGAAGGAGAAGCACAGTAGCATTTCTCACTTGTAGTCTTCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAAGAAGGAGAAGCACAGTAGCATTTCTCACTTGTAGTCTTCATC  399

seq1  AGTGTTTGCAGGAGACCGAGCAGATGCCCCACACTCTGGGGAGGTGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTGCAGGAGACCGAGCAGATGCCCCACACTCTGGGGAGGTGTAGA  449

seq1  ACAGAGATTTTTCTCATGCCAGGATTCTGCCCTTGAACCAGATTAAGGAC  500
      ||||||||||||||||||||||||||||| |||||||||||||||| |||
seq2  ACAGAGATTTTTCTCATGCCAGGATTCTG-CCTTGAACCAGATTAA-GAC  497

seq1  TACATCAAACAGGCTTTGTCTGTTAAGTTAGAGACCACTGTCTTTAGAAC  550
      |||||| |||| ||||||||||||||||||||||||||||||||||||||
seq2  TACATC-AACA-GCTTTGTCTGTTAAGTTAGAGACCACTGTCTTTAGAAC  545

seq1  CTGGCCAGGCTCCCTGCCCTAGCCAAGCAGATAGTAGCTGGGCATATGTT  600
      |||| |||||| |||| |||||||||||||||||||||| ||||||||||
seq2  CTGG-CAGGCT-CCTG-CCTAGCCAAGCAGATAGTAGCT-GGCATATGTT  591

seq1  TTCATAGGCATGGAACATTCCAGGCGCCCATGTAGTCCAGCAACAGCAGC  650
      |||||| ||||||||||||||| ||| |||||||||||||||||||||||
seq2  TTCATA-GCATGGAACATTCCA-GCG-CCATGTAGTCCAGCAACAGCAGC  638

seq1  AACAAAGAAAGGCAACAGTATTATATGCAGAAGCGGCTCAAGAGAATGGG  700
      |||||   |||||||||||||||||||||||||||||||||||||||  |
seq2  AACAA--GAAGGCAACAGTATTATATGCAGAAGCGGCTCAAGAGAAT--G  684

seq1  TGATGGGTGTTGAGTATAGGGCAGGAGAGAGGGTGACTTCATGGCCTCAA  750
      |||| |||||||||||||  |||||||||| ||||||||||||||||| |
seq2  TGAT-GGTGTTGAGTATA--GCAGGAGAGA-GGTGACTTCATGGCCTC-A  729

seq1  CACTGGCAGATCGTCACCCACCAGAGATGATAGCTATGGGTACACACATG  800
      |||||||||||||||| |||||||| ||||| ||||| ||||| ||||||
seq2  CACTGGCAGATCGTCA-CCACCAGA-ATGAT-GCTAT-GGTAC-CACATG  774

seq1  AAATGAAACCCTAGTAGCTTAAAAACAGAACTTTAATTTAAAAACAAAAA  850
       ||||||  |||||||||| ||  ||      |||| ||      ||  |
seq2  -AATGAA--CCTAGTAGCTGAACGAC------TTAAATT------AACTA  809

seq1  TTAGTAATTAAAATCTCCTGTTCAGTATATCCCCGAGCTCATTCCGGTTG  900
      |||||||||  ||||| ||| |||||||    |||||||||||||    |
seq2  TTAGTAATT--AATCT-CTG-TCAGTAT----CCGAGCTCATTCC----G  847

seq1  TCCGTTACACTTGAATCTAATCTCATC  927
      | |||||||  || |||| ||||||||
seq2  TGCGTTACAACTG-ATCT-ATCTCATC  872

seq1: chr14_86706806_86706986
seq2: B6Ng01-110H15.g_72_252 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACACACGAATGCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACGAATGCAGA  50

seq1  CAAACACACACAAATAAATGCAATTTTTAAAAGTTAATTCTAATGTGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACACACAAATAAATGCAATTTTTAAAAGTTAATTCTAATGTGGGG  100

seq1  ATCAGTTATTCCCTCAGAACTATCTAATGTGTGATTAATAAAAAGGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTATTCCCTCAGAACTATCTAATGTGTGATTAATAAAAAGGGTTT  150

seq1  TCTTTTTTCCCTCAACTTTCATTTTCCTCTG  181
      |||||||||||||||||||||||||||||||
seq2  TCTTTTTTCCCTCAACTTTCATTTTCCTCTG  181