BAC Information

Click to search

BAC

Clone NameB6Ng01-110O17
Chromosome14 (Build37)
Map Location 60,510,498 - 60,661,815
singlet/doubletdoublet
Overlap geneAtp8a2, LOC668162
Upstream geneEG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46
Downstream geneLOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13, C1qtnf9, Mipep, LOC100043586, Tnfrsf19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110O17.bB6Ng01-110O17.g
ACCDH917405DH917406
length1,0941,070
definitionDH917405|Mus musculus domesticus DNA, BAC clone: B6Ng01-110O17, 5' end.DH917406|Mus musculus domesticus DNA, BAC clone: B6Ng01-110O17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,660,710 - 60,661,815)(60,510,498 - 60,511,564)
sequence
gaattcctgaatcagagtcttaagtttacattttgacaagttcacaggaa
cggcttctgctggtgatatgggcagttcactgcggaacagtgaatctggg
gaccttggtagggtttgagaaaaagatgttgttcaagacagagcgtaggg
aaggaacacgtaggtgtccttgagagccacacccagctgaactcatgcga
gagtattacatttgagacagagaccctgagctttgcttggctctggtgat
ctcagagaggtagacctcaattattgggataaattctgagagtcctttag
ctgttttacagttgagagacaggaggctccttctgaggctgcagtgaatt
cagggaccctgaatagttttttttttccctcactgtgcaaattcttttag
tgattatcacacaaacctggaatggtaggtcatgtgtaagaacaccaaac
agaaaaccggcttcagattctgagtcaccgtttctcattgtagttgaaac
ctcttagcacccagatcctagaaataaagtgtcttgagagaacatcgttt
gacttttcttcttactttgatttaagaaaaaagaatccactgttgtgggt
aggtgattaatctgctctcaattgtccagcagcaacatcgagagtttccg
tgccatccgccctcatgttctgagttcccgaatgaatgacacacacacgt
agccttatatttaatatgcttcaatcagcccaatggctgggccactccct
agcatccacgtggttaacacaatttccatagctttctcatggttacacag
ctgcccaggggactcacagttgcacaggccagcttcagagccacatgtgt
gacacttccaccgtgaacagctgtggaggtgtttgagagatgagaggata
cttggaaggaaaatggtgatcttatacttgttcactcgtcttttctcttt
cctttcctttcttcttctttttaaaagatttttaatggacactgcagatt
ggaaggttgctaatagttagaacagagcactatagcacttagtcaaggac
tacctgtatcactcgaggacttgaacatctcttttcacaggcac
gaattcatgcatggaacccaagatggacagttcttaaagtcctgggtaag
ggtaagggtaagggtaagggtgatgtgtcaagcaaaaactggcttttttc
ccatataaggtccgagtttgagtgctggcattgattcaggaggggaattg
gcaccacctggaacttggctttggcattgtctaggtaagaggagctttaa
aatgtggatggggctgtagagagcaggagtgtgggtcccagcgtaatact
ctgagtattgaaatttgagtatcatttccaagattcccctggagaacaca
tgcatcctgtactgttgctttaacagtccaaaaaagatcactggaatctc
catttttcacgcaaagtttttgagagagtgtggcctcctttttgggagca
caatgagaaggctgggaaagctcaggcccttgggctttgatgagaaagct
tgtctgggggtcttgaatgttttgcttgcttgcttgcttgcttggaaagt
gcccaagtggaagaaggaaagaggctgaagaggaaagcagcgactcagag
acagtccagtcagagctgttaggtctccagtgaaattcaggacagatggc
aaatggtggtgcagaaccagaaggtgcgctggcccaaggctctcttggta
cctgtggctcctctgctctcttacccaggcccccaccctcaacctcgcca
gcacaagggcttcgtttcctttccccagtttcgggattcccatgaaaaca
cgatggtttcagccccgcactgttggctctcttggctccttctcttggtc
ctccaccttcggatctctgttctctgggcttctctctcctcctggcccct
tttccttggctctccctcttctcttctctctacaaccacccctacttccc
ctcttgttgtctggtcagcctattgccatgttcagtggactatttttctc
tccccacttctggactcttccagagcccctggctgtacctctgttatcta
caataaaaaccttctccttcaacatatcttaaaatcaatgtgtccttctt
ttatttcagggaccaccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_60660710_60661815
seq2: B6Ng01-110O17.b_48_1141 (reverse)

seq1  GTGCCTGTGAAAAAGAGAGTGTCAAAGTCCCTCGAGTTGGAATTACAGGT  50
      ||||||||| |||||||| |||  |||| ||||||||  ||  |||||||
seq2  GTGCCTGTG-AAAAGAGA-TGTTCAAGT-CCTCGAGT--GA--TACAGGT  43

seq1  AGTCCTGAACTAGTGGCTATAGTGCTTCTGTCTTAACTATTAAGCCAACC  100
      ||||||  ||||   |||||||||| |||||  |||||||||   |||||
seq2  AGTCCTTGACTAAGTGCTATAGTGC-TCTGTTCTAACTATTA--GCAACC  90

seq1  CTCCAATCCTGCAGTGGTTCATTAAAAATCTTTTTAAAAAGAAAGAAGAA  150
       |||||| ||||||| || ||||||||||| |||||||||| ||||||||
seq2  TTCCAAT-CTGCAGT-GTCCATTAAAAATC-TTTTAAAAAG-AAGAAGAA  136

seq1  AGGAAAGGAAAGAGAAAAGACGAGTGAACAAGTATAAAGATCA-CATTTT  199
      ||||||||||||||||||||||||||||||||||| ||||||| ||||||
seq2  AGGAAAGGAAAGAGAAAAGACGAGTGAACAAGTAT-AAGATCACCATTTT  185

seq1  CC-TCCAAGTATCCTCTCATCTCTCAAACACCTCCACAGCTGTTCACGGT  248
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAAGTATCCTCTCATCTCTCAAACACCTCCACAGCTGTTCACGGT  235

seq1  GGAAGTGTCACACATGTGGCTCTGAAGCTGGCCTGTGCAACTGTGAGTCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGTCACACATGTGGCTCTGAAGCTGGCCTGTGCAACTGTGAGTCC  285

seq1  CCTGGGCAGCTGTGTAACCATGAGAAAGCTATGGAAATTGTGTTAACCAC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCAGCTGTGTAACCATGAGAAAGCTATGGAAATTGTGTTAACCAC  335

seq1  GTGGATGCTAGGGAGTGGCCCAGCCATTGGGCTGATTGAAGCATATTAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGCTAGGGAGTGGCCCAGCCATTGGGCTGATTGAAGCATATTAAA  385

seq1  TATAAGGCTACGTGTGTGTGTCATTCATTCGGGAACTCAGAACATGAGGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGCTACGTGTGTGTGTCATTCATTCGGGAACTCAGAACATGAGGG  435

seq1  CGGATGGCACGG-AACTCTCGATGTTGCTGCTGGACAATTGAGAGCAGAT  497
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CGGATGGCACGGAAACTCTCGATGTTGCTGCTGGACAATTGAGAGCAGAT  485

seq1  TAATCACCTACCCACAACAGTGGATTCTTTTTTCTTAAATCAAAGTAAGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCACCTACCCACAACAGTGGATTCTTTTTTCTTAAATCAAAGTAAGA  535

seq1  AGAAAAGTCAAACGATGTTCTCTCAAGACACTTTATTTCTAGGATCTGGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTCAAACGATGTTCTCTCAAGACACTTTATTTCTAGGATCTGGG  585

seq1  TGCTAAGAGGTTTCAACTACAATGAGAAACGGTGACTCAGAATCTGAAGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAGAGGTTTCAACTACAATGAGAAACGGTGACTCAGAATCTGAAGC  635

seq1  CGGTTTTCTGTTTGGTGTTCTTACACATGACCTACCATTCCAGGTTTGTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTTCTGTTTGGTGTTCTTACACATGACCTACCATTCCAGGTTTGTG  685

seq1  TGATAATCACTAAAAGAATTTGCACAGTGAGGGAAAAAAAAAACTATTCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATCACTAAAAGAATTTGCACAGTGAGGGAAAAAAAAAACTATTCA  735

seq1  GGGTCCCTGAATTCACTGCAGCCTCAGAAGGAGCCTCCTGTCTCTCAACT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCCTGAATTCACTGCAGCCTCAGAAGGAGCCTCCTGTCTCTCAACT  785

seq1  GTAAAACAGCTAAAGGACTCTCAGAATTTATCCCAATAATTGAGGTCTAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACAGCTAAAGGACTCTCAGAATTTATCCCAATAATTGAGGTCTAC  835

seq1  CTCTCTGAGATCACCAGAGCCAAGCAAAGCTCAGGGTCTCTGTCTCAAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGAGATCACCAGAGCCAAGCAAAGCTCAGGGTCTCTGTCTCAAAT  885

seq1  GTAATACTCTCGCATGAGTTCAGCTGGGTGTGGCTCTCAAGGACACCTAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATACTCTCGCATGAGTTCAGCTGGGTGTGGCTCTCAAGGACACCTAC  935

seq1  GTGTTCCTTCCCTACGCTCTGTCTTGAACAACATCTTTTTCTCAAACCCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCTTCCCTACGCTCTGTCTTGAACAACATCTTTTTCTCAAACCCT  985

seq1  ACCAAGGTCCCCAGATTCACTGTTCCGCAGTGAACTGCCCATATCACCAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGTCCCCAGATTCACTGTTCCGCAGTGAACTGCCCATATCACCAG  1035

seq1  CAGAAGCCGTTCCTGTGAACTTGTCAAAATGTAAACTTAAGACTCTGATT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCCGTTCCTGTGAACTTGTCAAAATGTAAACTTAAGACTCTGATT  1085

seq1  CAGGAATTC  1106
      |||||||||
seq2  CAGGAATTC  1094

seq1: chr14_60510498_60511564
seq2: B6Ng01-110O17.g_70_1139

seq1  GAATTCATGCATGGAACCCAAGATGGACAGTTCTTAAAGTCCTGGGTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCATGGAACCCAAGATGGACAGTTCTTAAAGTCCTGGGTAAG  50

seq1  GGTAAGGGTAAGGGTAAGGGTGATGTGTCAAGCAAAAACTGGCTTTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGGGTAAGGGTAAGGGTGATGTGTCAAGCAAAAACTGGCTTTTTTC  100

seq1  CCATATAAGGTCCGAGTTTGAGTGCTGGCATTGATTCAGGAGGGGAATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATAAGGTCCGAGTTTGAGTGCTGGCATTGATTCAGGAGGGGAATTG  150

seq1  GCACCACCTGGAACTTGGCTTTGGCATTGTCTAGGTAAGAGGAGCTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCACCTGGAACTTGGCTTTGGCATTGTCTAGGTAAGAGGAGCTTTAA  200

seq1  AATGTGGATGGGGCTGTAGAGAGCAGGAGTGTGGGTCCCAGCGTAATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGATGGGGCTGTAGAGAGCAGGAGTGTGGGTCCCAGCGTAATACT  250

seq1  CTGAGTATTGAAATTTGAGTATCATTTCCAAGATTCCCCTGGAGAACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTATTGAAATTTGAGTATCATTTCCAAGATTCCCCTGGAGAACACA  300

seq1  TGCATCCTGTACTGTTGCTTTAACAGTCCAAAAAAGATCACTGGAATCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCTGTACTGTTGCTTTAACAGTCCAAAAAAGATCACTGGAATCTC  350

seq1  CATTTTTCACGCAAAGTTTTTGAGAGAGTGTGGCCTCCTTTTTGGGAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCACGCAAAGTTTTTGAGAGAGTGTGGCCTCCTTTTTGGGAGCA  400

seq1  CAATGAGAAGGCTGGGAAAGCTCAGGCCCTTGGGCTTTGATGAGAAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGAAGGCTGGGAAAGCTCAGGCCCTTGGGCTTTGATGAGAAAGCT  450

seq1  TGTCTGGGGGTCTTGAATGTTTTGCTTGCTTGCTTGCTTGCTTGGAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGGGGTCTTGAATGTTTTGCTTGCTTGCTTGCTTGCTTGGAAAGT  500

seq1  GCCCAAGTGGAAGAAGGAAAGAGGCTGAAGAGGAAAGCAGCGACTCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGTGGAAGAAGGAAAGAGGCTGAAGAGGAAAGCAGCGACTCAGAG  550

seq1  ACAGTCCAGTCAGAGCTGTTAGGTCTCCAGTGAAATTCAGGACAGATGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCAGTCAGAGCTGTTAGGTCTCCAGTGAAATTCAGGACAGATGGC  600

seq1  AAATGGTGGTGCAGAACCAGAAGGTGCGCTGGCCCAAGGCTCTCTTGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTGGTGCAGAACCAGAAGGTGCGCTGGCCCAAGGCTCTCTTGGTA  650

seq1  CCTGTGGCTCCTCTGCTCTCTTACCCAGGCCCCCACCCTCAACCTCGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGCTCCTCTGCTCTCTTACCCAGGCCCCCACCCTCAACCTCGCCA  700

seq1  GCACAAGGGCTTCGTTTCCTTTCCCCAGTTTC-GGATTCCCATGAAAACA  749
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCACAAGGGCTTCGTTTCCTTTCCCCAGTTTCGGGATTCCCATGAAAACA  750

seq1  CGATGG-TTCAGCCCCGCACTGTTGGCTCTCTTGGCTCCTTCTCTTGGTC  798
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGGTTTCAGCCCCGCACTGTTGGCTCTCTTGGCTCCTTCTCTTGGTC  800

seq1  CTCCACCTTCGGATCTCTGTTCTCTGGGC-TCTCTCT-CTCCTGGCCCC-  845
      ||||||||||||||||||||||||||||| ||||||| ||||||||||| 
seq2  CTCCACCTTCGGATCTCTGTTCTCTGGGCTTCTCTCTCCTCCTGGCCCCT  850

seq1  TTTCCTTGGCTCTCCCTCTTCTCTTCCTCTCTCACACCCACCCCTACCTC  895
      ||||||||||||||||||||||||| |||||| ||| |||||||||| ||
seq2  TTTCCTTGGCTCTCCCTCTTCTCTT-CTCTCT-ACAACCACCCCTACTTC  898

seq1  CCCTCTTGTGTCCTGGTTCAGTCTAGTGGCCATGTTCAGTGTACTA-TTT  944
      |||||||||   |||| |||| ||| | ||||||||||||| |||| |||
seq2  CCCTCTTGTTGTCTGG-TCAGCCTA-TTGCCATGTTCAGTGGACTATTTT  946

seq1  TCTCTCCCCAC-TCTGGACTCTTCCAGATGCCCCTGGCTGTA-CTCTGTT  992
      ||||||||||| |||||||||||||||| ||||||||||||| |||||||
seq2  TCTCTCCCCACTTCTGGACTCTTCCAGA-GCCCCTGGCTGTACCTCTGTT  995

seq1  ATCTACAATAAAAACCTTCTCCTCAACCATATCTTAGAATCAATGTTGTC  1042
      |||||||||||||||||||||||  | ||||||||| |||||||| ||||
seq2  ATCTACAATAAAAACCTTCTCCTTCAACATATCTTAAAATCAATG-TGTC  1044

seq1  C-TCATTTCATCCAGGGACCACCAGG  1067
      | || |||  | ||||||||||||||
seq2  CTTCTTTTATTTCAGGGACCACCAGG  1070