BAC Information

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BAC

Clone NameB6Ng01-110P10
Chromosome14 (Build37)
Map Location 32,648,325 - 32,813,566
singlet/doubletdoublet
Overlap genenone
Upstream geneTmem110, Mustn1, Itih4, Itih3, Itih1, Nek4, Spcs1, Glt8d1, Gnl3, Pbrm1, EG432834, Nt5dc2, Stab1, Nisch, Tnnc1, Sema3g, Phf7, Bap1, Dnahc1, Capn7, Sh3bp5, Mettl6, Eaf1, Colq, Hacl1, Btd, Ankrd28
Downstream geneGalntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23, Parg, LOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618, Ercc6, 9430077A04Rik, Prrxl1, 3425401B19Rik, 1810011H11Rik, 4922501K12Rik, E130203B14Rik, EG665658, Lrrc18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110P10.bB6Ng01-110P10.g
ACCDH917435DH917436
length989326
definitionDH917435|Mus musculus domesticus DNA, BAC clone: B6Ng01-110P10, 5' end.DH917436|Mus musculus domesticus DNA, BAC clone: B6Ng01-110P10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,812,568 - 32,813,566)(32,648,325 - 32,648,650)
sequence
gaattcctcagacatggatgatacaactacatatcattggcaagcctgag
gacatctgttttctcatgattagatttgctcaaatagttctagaaagaaa
actcctatttatgactttttgtgatgtcacattcttttcattgcatgaga
ttaggagggaccgggtgtagtggcatacgcctttaatcccagcactcagg
aggcagaggcaggaggatttctgagttcgaggccagcctggtctagaaag
tgagttccaggacagccagggctatacagagaaaccctgtctcgaaggaa
aaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag
aaaaaagaaagaaagaaagaaaaaagaaaggaaggaagaaagaaagaaag
aaagaaagaaagaaagaaagaaagaaagaaagagaaaaaaaaagaaaaaa
gattaggaagggaaaataaacaaaaaaatgtagtttggccactttcaatg
agccccaggagagcttggtaaaacttcagtctctggaccctaccctctta
gttttgatttttgagatctgaaagaagatctgagatttgaattggttgca
agtttgaaggattcgagccatgtgtgtacaatctcacatccgtgctgtgg
ctgccaaggagaaggcacgagagctgctcacaaagtggtctgcatgaatt
gtaagggttctaactaatacaacacagccacagaaagagctccttcacag
gcaggcaggagggtagcctgacaaccctggacaagaaacagcatccagaa
ctgacctgtgcttcttcctcctgactgagaacaagtctcagacagactgt
agatggttgggcctgtgtctcagtttagattactgttgctacccagacct
tacaccagcaagccttcatagtcattacatcactggctgagttctgcacc
tcctcctgatctatgcctttggtgtataataaatctccc
agagttaaaatgttctagtcttactcagaattgaaatagtcactgacttt
agactggcaaattatctacattaataaggtccttatttagggagtaaggc
ttcatgcaggggtttcttttttctgttgtctttttttttttttttttttt
tttttttttggtttttcaaaaacgggtttctctgtataacgttgactggc
ctggaactcactctgtagaccaggctggcctcaaactcagaaatctgcct
gcctctgccccccaagtgctgggaataaagggaatggccaccactacccc
tccaggggtttctttaaatgaaaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_32812568_32813566
seq2: B6Ng01-110P10.b_47_1035 (reverse)

seq1  GGGAGAATTTATTTATACAACAAAAGGCATAGATCCAGGGAGAGGTGCAG  50
      ||||| ||||| |||||| || |||||||||||| ||||  |||||||||
seq2  GGGAG-ATTTA-TTATAC-ACCAAAGGCATAGAT-CAGGAGGAGGTGCAG  46

seq1  AACCTCAGCCAGTGATGTAATTGACTATGAAGGCCTTTGCCTGGTGTAAG  100
      || ||||||||||||||||| |||||||||||||  ||| ||||||||||
seq2  AA-CTCAGCCAGTGATGTAA-TGACTATGAAGGC--TTG-CTGGTGTAAG  91

seq1  GTCTGGGTAGCAACAGTAATCTTAACTGAGACACAGGCCCAACCATCTAC  150
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTCTGGGTAGCAACAGTAATCTAAACTGAGACACAGGCCCAACCATCTAC  141

seq1  AGTCCTGTCTGAGACTTGTTCTCAGTCAGGAGGAAGAAGCACAGGTCAGT  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGT-CTGTCTGAGACTTGTTCTCAGTCAGGAGGAAGAAGCACAGGTCAGT  190

seq1  TCTGGATGCTGTTTCTTGTCCAGGGTTGTCAGGCTACCCTCCTGCCTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATGCTGTTTCTTGTCCAGGGTTGTCAGGCTACCCTCCTGCCTGCC  240

seq1  TGTGAAGGAGCTCTTTCTGTGGCTGTGTTGTATTAGTTAGAACCCTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAGGAGCTCTTTCTGTGGCTGTGTTGTATTAGTTAGAACCCTTACA  290

seq1  ATTCATGCAGACCACTTTGTGAGCAGCTCTCGTGCCTTCTCCTTGGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGCAGACCACTTTGTGAGCAGCTCTCGTGCCTTCTCCTTGGCAGC  340

seq1  CACAGCACGGATGTGAGATTGTACACACATGGCTCGAATCCTTCAAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCACGGATGTGAGATTGTACACACATGGCTCGAATCCTTCAAACTT  390

seq1  GCAACCAATTCAAATCTCAGATCTTCTTTCAGATCTCAAAAATCAAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCAATTCAAATCTCAGATCTTCTTTCAGATCTCAAAAATCAAAACT  440

seq1  AAGAGGGTAGGGTCCAGAGACTGAAGTTTTACCAAGCTCTCCTGGGGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGTAGGGTCCAGAGACTGAAGTTTTACCAAGCTCTCCTGGGGCTC  490

seq1  ATTGAAAGTGGCCAAACTACATTTTTTTGTTTATTTTCCCTTCCTAATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAGTGGCCAAACTACATTTTTTTGTTTATTTTCCCTTCCTAATCT  540

seq1  TTTTTCTTTTTTTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTTTTTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  590

seq1  TTTCTTTCTTTCTTCCTTCCTTTCTTTTTTCTTTCTTTCTTTCTTTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTCCTTCCTTTCTTTTTTCTTTCTTTCTTTCTTTTTTC  640

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTT  690

seq1  TCCTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCAC  740

seq1  TTTCTAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCCTCTGCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGACCAGGCTGGCCTCGAACTCAGAAATCCTCCTGCCTCTGCCTC  790

seq1  CTGAGTGCTGGGATTAAAGGCGTATGCCACTACACCCGGTCCCTCCTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGCTGGGATTAAAGGCGTATGCCACTACACCCGGTCCCTCCTAAT  840

seq1  CTCATGCAATGAAAAGAATGTGACATCACAAAAAGTCATAAATAGGAGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCAATGAAAAGAATGTGACATCACAAAAAGTCATAAATAGGAGTT  890

seq1  TTCTTTCTAGAACTATTTGAGCAAATCTAATCATGAGAAAACAGATGTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTAGAACTATTTGAGCAAATCTAATCATGAGAAAACAGATGTCC  940

seq1  TCAGGCTTGCCAATGATATGTAGTTGTATCATCCATGTCTGAGGAATTC  999
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTTGCCAATGATATGTAGTTGTATCATCCATGTCTGAGGAATTC  989

seq1: chr14_32648325_32648650
seq2: B6Ng01-110P10.g_73_398

seq1  AGAGTTAAAATGTTCTAGTCTTACTCAGAATTGAAATAGTCACTGACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTAAAATGTTCTAGTCTTACTCAGAATTGAAATAGTCACTGACTTT  50

seq1  AGACTGGCAAATTATCTACATTAATAAGGTCCTTATTTAGGGAGTAAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGCAAATTATCTACATTAATAAGGTCCTTATTTAGGGAGTAAGGC  100

seq1  TTCATGCAGGGGTTTCTTTTTTCTGTTGTCTTTTTTTTTTTTTTTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCAGGGGTTTCTTTTTTCTGTTGTCTTTTTTTTTTTTTTTTTTTT  150

seq1  TTTTTTTTTGGTTTTTCAAGACAGGGTTTCTCTGTATAACGTTGACTGTC  200
      ||||||||||||||||||| |  ||||||||||||||||||||||||| |
seq2  TTTTTTTTTGGTTTTTCAAAAACGGGTTTCTCTGTATAACGTTGACTGGC  200

seq1  CTGGAACTCACTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTCACTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGCCT  250

seq1  GCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGTGCCACCACTACCCC  300
      ||||||||| |||||||||||||| |||||| |   ||||||||||||||
seq2  GCCTCTGCCCCCCAAGTGCTGGGAATAAAGGGAATGGCCACCACTACCCC  300

seq1  TCCAGGGGTTTCTTAAAATGAGAACA  326
      |||||||||||||| |||||| ||||
seq2  TCCAGGGGTTTCTTTAAATGAAAACA  326