BAC Information

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BAC

Clone NameB6Ng01-111K12
Chromosome14 (Build37)
Map Location 25,236,152 - 25,236,842
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnma1, LOC620499, Dlg5, LOC100039335, E330034G19Rik, LOC669325
Downstream genePolr3a, Rps24, LOC669315, LOC100039411
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111K12.bB6Ng01-111K12.g
ACCDH917942DH917943
length6671,082
definitionDH917942|Mus musculus domesticus DNA, BAC clone: B6Ng01-111K12, 5' end.DH917943|Mus musculus domesticus DNA, BAC clone: B6Ng01-111K12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaaactagatatcacaaatcaaataatccaatattttagatg
ggatacaaatctaaacaaagaactctcaatagagcaatcccaagttgctg
agaaacacttaaagatattttcaacatccttagccaccatggaaagcaaa
tcaaaactaccttgatattccatcttatacacctgtcataatggctaaga
tcagcaacacaagtgacagctcatgctgatgagaatgtggagcaagaagc
acactccttctttgttgataggagtgcaaacttgtacaactactatagaa
ctgatctacctcaagacccatctatatcattcttgggcacatagccaaag
gatgttctatctcatcacaaagatacttgcttgaatatgttcatagtacc
tttattcataatagccagaaactggaagcaattagatgtccttcaccaaa
gaatggataaggatttgtggactttgcaggatactcagctgttaaaacaa
tgacatcagaaatacatctgaatggggtaccaaaccagaaacacaacttg
ttatactactttaatagaattactgttagaaatataatcatgcacatcac
aaccaaaagctaatacaagaggcttaggagggaataataatttgtgtgac
tgggtgggggaaggaaa
gaattcatgtagttgaatcttttttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cggtgaaactctcgtcccgagtttcctcccgggttttttcttttcggatt
ttttctcgtcccggaatttttcgtcccgggtttcggcaccaattcttaat
cgcgttctcacgcccggccaggaaagacgcaacagaccagaatcttctgc
ggcaaaactttattgcttacatctttgggagccaggagggcaagcgccca
gcgcccagccccaaaaacgaaaagccccttctattacatctttaggagcc
agagctccggcgcgcgcgctctattgtttacatctttaggcagcgagcga
gcgcagggcgcgcagagccagagagatgccagcgagagagaaatggcgga
aacccgtccccttttttaggagcgttatatttcgcctaggacgcatcact
ccctgattggctgtagcccatggccgagctgacgttcacgggaaaggtag
agtacaagtagtcataaaatacccttggcacatgcgcagattatttgttt
accacttagaacacaggatgtcagcgccatcttgtgacggcgaatgtggg
ggcggctcccaacacttccctccttctgcctcctgtggctattttattcc
ccattctaagtgagattcaatcatcctcacttgggcctttcttcttgttt
agtacttttaggtttgtggagtgtaggctttggtatcctgtactttatgg
caaacatcgacttttaagtgagaacatactctgtattatgtccttttggg
tccaggctacctaattcagaatattgtctttacatcccaatatcagtcct
ttcatccctttccattaacacctcaaacagatcctccaccaactcctccc
tctctctctgtactggctagtttgttgtcacttgacacagctggagttat
cacagagaaggagctcagttggaggaatgctccatgaagatccactgtaa
ggcattttctcattatgatcaagggaaggccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_25236152_25236842
seq2: B6Ng01-111K12.g_472_1152

seq1  CGCAGGGCGCGCAGAGCCAGAGAGATGCCAGCGAGAGAGAAATGGCGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGGCGCGCAGAGCCAGAGAGATGCCAGCGAGAGAGAAATGGCGGAA  50

seq1  ACCCGTCCCCTTTTTTAGGAGCGTTATATTTCGCCTAGGACGCATCACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGTCCCCTTTTTTAGGAGCGTTATATTTCGCCTAGGACGCATCACTC  100

seq1  CCTGATTGGCTGTAGCCCATGGCCGAGCTGACGTTCACGGGAAAGGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTGGCTGTAGCCCATGGCCGAGCTGACGTTCACGGGAAAGGTAGA  150

seq1  GTACAAGTAGTCATAAAATACCCTTGGCACATGCGCAGATTATTTGTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGTAGTCATAAAATACCCTTGGCACATGCGCAGATTATTTGTTTA  200

seq1  CCACTTAGAACACAGGATGTCAGCGCCATCTTGTGACGGCGAATGTGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAGAACACAGGATGTCAGCGCCATCTTGTGACGGCGAATGTGGGG  250

seq1  GCGGCTCCCAACACTTCCCTCCTTCTGCCTCCTGTGGCTATTTTATTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCTCCCAACACTTCCCTCCTTCTGCCTCCTGTGGCTATTTTATTCCC  300

seq1  CATTCTAAGTGAGATTCAATCATCCTCACTTGGGCCTTTCTTCTTGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTAAGTGAGATTCAATCATCCTCACTTGGGCCTTTCTTCTTGTTTA  350

seq1  GTACTTTTAGGTTTGTGGAGTGTAGGCTTTGGTATCCTGTACTTTATGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTTAGGTTTGTGGAGTGTAGGCTTTGGTATCCTGTACTTTATGGC  400

seq1  AAACATCGAC-TTTAAGTGAGAACATACTCTGTATTATGTCCTTTTGGGT  449
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAACATCGACTTTTAAGTGAGAACATACTCTGTATTATGTCCTTTTGGGT  450

seq1  CCAGGCTACCTAATTCAGAATATTGTCTTTACATCCCAATATCAGTTCCT  499
      |||||||||||||||||||||||||||||||||||||||||||||| | |
seq2  CCAGGCTACCTAATTCAGAATATTGTCTTTACATCCCAATATCAGTCCTT  500

seq1  TCATCCCTTTCCATTAACACCTCAAACAGATCCTCCACCAACTCCTCCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCTTTCCATTAACACCTCAAACAGATCCTCCACCAACTCCTCCCT  550

seq1  CTCCTCCTCTGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGGAGTT  599
      |||   ||||||||||||||||||  |||| |||||||||||||||||||
seq2  CTC--TCTCTGTACTGGCTAGTTTGTTGTC-ACTTGACACAGCTGGAGTT  597

seq1  ATCACAGAGAAAGGAGCTTCAGTTGAGGAAATGCCTCCATG-AGATCCAA  648
      ||||||||| ||||||| |||||||  | |||| ||||||| |||||| |
seq2  ATCACAGAG-AAGGAGC-TCAGTTGGAGGAATG-CTCCATGAAGATCC-A  643

seq1  CTGTAAGGCATTTTCTCAATTAGTGATCAAGGGGGAAAGGCCC  691
      ||||||||||||||||| |||| ||||||||||   |||||||
seq2  CTGTAAGGCATTTTCTC-ATTA-TGATCAAGGG---AAGGCCC  681