BAC Information

Click to search

BAC

Clone NameB6Ng01-112D09
Chromosome14 (Build37)
Map Location 115,155,340 - 115,156,503
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382947, LOC668791, LOC100043821, LOC100043521
Downstream geneGpc5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112D09.bB6Ng01-112D09.g
ACCDH918334DH918335
length1,1541,154
definitionDH918334|Mus musculus domesticus DNA, BAC clone: B6Ng01-112D09, 5' end.DH918335|Mus musculus domesticus DNA, BAC clone: B6Ng01-112D09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttggaaatgattaataatggtcaaggccttaatgatgtatcct
tagtaaataaaagactggaatcagtctctcagatcagaccgataaagtaa
tgagagaacacatgagctgacagcttgcatccactactgacactgagtca
ctattgaatcaacactcctcccattttcccctttctcggactcccctcat
gttgaggctggacttcagtactgtaggaaaattaaatcatttataaaatc
aaaagtatcctaaatattacttctaaggaagaaaaatatactaaaattat
ttgaatttttaaaaatacattctaacaaatgatttcagtagcactgaaac
attgtaaaactgtggtgggacgtttacttcttcctacaatgagctcattt
ccaaagattctccaaagagaaatgataatggcagtagcacatccctttag
ccccaagcttaccctggtcttaatgcataaaccagtctatgccaaagagt
tgggacaaattgctctactttggtgctatatttataaatctaagcatatg
agttaacccatgtaagcacactttactgttaatgtcacttgtatctcttg
acatccaaatacaagataaatgccaaaaatctcaagcagcttttccgtct
ctgggtctccacagtatctgccttgatccacaaaagacaatccttacata
ttaaaattcccccatcatatcagatctctttcctgaacgactacccaaaa
gaatgctttgatctaaaagtaatactgtagctttaaaaattgaagacagg
gagaaagacgtgataaatatggaggctttgatgcctgtgagtgctttggg
atgccctaaacaggagtgaggggccaagtgatcagaagaatgacgtatgc
agaattgggatgcagggtcttcccacagtctgcagtctctggatgccaat
ttcccactgtgagcctagaaacttaataaacctgaattgttcacatagga
agatgagggaaagcataacgtttcagccactttcatcttttattattttg
aatggaaatcactcagttataaggattactcaaataatcaaggcctcaaa
ctcttgaacgttgaagctggtttagttggtcagtgggtaattgtcttgcc
acca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggatctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaaagagctaaagggatctgcacccta
taggtggacacattatgaactaaccagtaccctgagctcttgactctagc
tgcatatgtatcaaagatgctagtcgcatcactgaagagagccatggaca
cgccagacttttggtgccgtcagggagcccagggccaaaggtgggaatgg
tgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_115155340_115156503
seq2: B6Ng01-112D09.b_46_1199

seq1  GAATTCCTTGGAAATGATTAATAATGGTCAAGGCCTTAATGATGTATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGGAAATGATTAATAATGGTCAAGGCCTTAATGATGTATCCT  50

seq1  TAGTAAATAAAAGACTGGAATCAGTCTCTCAGATCAGACCGATAAAGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAATAAAAGACTGGAATCAGTCTCTCAGATCAGACCGATAAAGTAA  100

seq1  TGAGAGAACACATGAGCTGACAGCTTGCATCCACTACTGACACTGAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAACACATGAGCTGACAGCTTGCATCCACTACTGACACTGAGTCA  150

seq1  CTATTGAATCAACACTCCTCCCATTTTCCCCTTTCTCGGACTCCCCTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGAATCAACACTCCTCCCATTTTCCCCTTTCTCGGACTCCCCTCAT  200

seq1  GTTGAGGCTGGACTTCAGTACTGTAGGAAAATTAAATCATTTATAAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGGCTGGACTTCAGTACTGTAGGAAAATTAAATCATTTATAAAATC  250

seq1  AAAAGTATCCTAAATATTACTTCTAAGGAAGAAAAATATACTAAAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTATCCTAAATATTACTTCTAAGGAAGAAAAATATACTAAAATTAT  300

seq1  TTGAATTTTTAAAAATACATTCTAACAAATGATTTCAGTAGCACTGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTTTAAAAATACATTCTAACAAATGATTTCAGTAGCACTGAAAC  350

seq1  ATTGTAAAACTGTGGTGGGACGTTTACTTCTTCCTACAATGAGCTCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAAACTGTGGTGGGACGTTTACTTCTTCCTACAATGAGCTCATTT  400

seq1  CCAAAGATTCTCCAAAGAGAAATGATAATGGCAGTAGCACATCCCTTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGATTCTCCAAAGAGAAATGATAATGGCAGTAGCACATCCCTTTAG  450

seq1  CCCCAAGCTTACCCTGGTCTTAATGCATAAACCAGTCTATGCCAAAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGCTTACCCTGGTCTTAATGCATAAACCAGTCTATGCCAAAGAGT  500

seq1  TGGGACAAATTGCTCTACTTTGGTGCTATATTTATAAATCTAAGCATATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAAATTGCTCTACTTTGGTGCTATATTTATAAATCTAAGCATATG  550

seq1  AGTTAACCCATGTAAGCACACTTTACTGTTAATGTCACTTGTATCTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACCCATGTAAGCACACTTTACTGTTAATGTCACTTGTATCTCTTG  600

seq1  ACATCCAAATACAAGATAAATGCCAAAAATCTCAAGCAGCTTTTCCGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAAATACAAGATAAATGCCAAAAATCTCAAGCAGCTTTTCCGTCT  650

seq1  CTGGGTCTCCACAGTATCTGCCTTGATCCACAAAAGACAATCCTTACATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCTCCACAGTATCTGCCTTGATCCACAAAAGACAATCCTTACATA  700

seq1  TTAAAATTCCCCCATCATATCAGATCTCTTTCCTGAACGACTACCCAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTCCCCCATCATATCAGATCTCTTTCCTGAACGACTACCCAAAA  750

seq1  GAATGCTTTGATCTAAAAGTAATACTGTAGCTTTAAAAATTGAAGACAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTTTGATCTAAAAGTAATACTGTAGCTTTAAAAATTGAAGACAGG  800

seq1  GAGAAAGACGTGATAAATATGGAGGCTTTGATGCCTGTGAGTGCTTTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGACGTGATAAATATGGAGGCTTTGATGCCTGTGAGTGCTTTGGG  850

seq1  ATGCCCTAAAACAGGAGTGAGGGGCCAAGTGATCAGAAGAATGACGTATG  900
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCT-AAACAGGAGTGAGGGGCCAAGTGATCAGAAGAATGACGTATG  899

seq1  CAAGAATTGGGATGCAGGGTCTTCCCACAGTCTGCAGTCTCTGGATGCCA  950
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-AGAATTGGGATGCAGGGTCTTCCCACAGTCTGCAGTCTCTGGATGCCA  948

seq1  ATTTCCCACTGTGAGCCTAGAAACTTAAATAAACCTGAATTGTTCACATA  1000
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATTTCCCACTGTGAGCCTAGAAACTT-AATAAACCTGAATTGTTCACATA  997

seq1  GGAAGATGAGGGAAAGCATAACGTTTCAGCCACTGTCAATCTTTTATTAA  1050
      |||||||||||||||||||||||||||||||||| || |||||||||| |
seq2  GGAAGATGAGGGAAAGCATAACGTTTCAGCCACTTTC-ATCTTTTATT-A  1045

seq1  TTTTGAATGTAAATCACTCAGTTTATTAAAGAATTACTAAAATAATCAAG  1100
      ||||||||| ||||||||||| ||||  ||| |||||| |||||||||||
seq2  TTTTGAATGGAAATCACTCAG-TTAT--AAGGATTACTCAAATAATCAAG  1092

seq1  GCCTCAAAAACTCTGAACGTTG-AGCTTGTTTAGTTGGTCCAGTGGTTAA  1149
      ||||||||  || ||||||||| |||| ||||||||||| |||||| |||
seq2  GCCTCAAACTCT-TGAACGTTGAAGCTGGTTTAGTTGGT-CAGTGGGTAA  1140

seq1  ATGTCCTTGCCACCA  1164
       ||| ||||||||||
seq2  TTGT-CTTGCCACCA  1154