BAC Information

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BAC

Clone NameB6Ng01-113G21
Chromosome14 (Build37)
Map Location 62,527,379 - 62,676,791
singlet/doubletdoublet
Overlap genenone
Upstream geneTnfrsf19, Sacs, Sgcg, Arl11, EG432864, Ebpl, Kpna3, LOC100042933, EG432865, 6330409N04Rik, LOC100042941, Trim13, Kcnrg, LOC668253
Downstream geneDleu7, Rnaseh2b, Gucy1b2, LOC100042960, Ppia-ps14_723.1, LOC545062, EG629059, E130113E03Rik, Ints6, LOC100042969, LOC668263, Wdfy2, LOC668268, EG432867, EG654465, EG654458, 2410125J01Rik, Defb42
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113G21.bB6Ng01-113G21.g
ACCDH919228DH919229
length9731,003
definitionDH919228|Mus musculus domesticus DNA, BAC clone: B6Ng01-113G21, 5' end.DH919229|Mus musculus domesticus DNA, BAC clone: B6Ng01-113G21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,527,379 - 62,527,946)(62,675,791 - 62,676,791)
sequence
gaattcaagaaaggggtgctgtcagaagcagagaggtctctagtcaaatt
ctctttaagaaagaaatgtccatagcacccagaggaggccccactccaag
gcactctagtatgcccaggatcataggatcaggggtgagtaggacacaac
atctgttccaacactactgggagtaactgggaccagcaggatccagggac
acaggaaccctgcctgaccaagtggctggggttccttccagtctgcactg
gtttaccttgggtgtgaactctttagccagtcccacagcactcagaagag
gctcaaacaccagaagctctaacacacccaggattacaggatccctggat
cctaggagcttggtcacaccacgtcctcagggtcctagagcagcttgagt
tccaggaactctgaaatacctagaatctcaggatcacaggatcctgaaat
cacaggatcacagagacagctggactctgaggagtcctgacacaacctgg
attacaggaaggacaggatccagtcaaatatagcaagggcaggtagcaca
aaagatgattagatggtgggaggcaagcgtaagaacataagcaacagaaa
ccaaagttacttagcatcatcagaacccaatactcccaccatagcaggtc
ctggatacatcaaaaacaagaactgtgtctaaaatcacttctcatgatga
tgatagaggacttcaagaaggacataagtaactcacttaaggaaatagaa
ggagaacagaggtaaacagctagaagcccttaaagaggaaacaaaaaatc
ccttcaagaattataggaaaatacaatcaaacaggtgaaggaaatgaaca
aaaccatccaagatctaaaactggaactagaacaataaggaaatcacaaa
gagagacaaccctgaagttagaaaactgaggaaagagatcaggagtcata
atgcaagtcaccaacagaataca
gaattcactaacacaggcattagtagatgactctgtccattgagctagat
agacatagagctagaactagaacccaagatctttgattcttagtaagaag
acccattggtttttattctctgaattcaactcagtttctactgcaggacc
tctgactcagatgtttacgactctcactgcacatagggcttgcctgtgtt
gatccctttatcacaggttggcagtgggttgatttcttaatacctgtgca
acaacagttgactgccccttagaaacacagctgaagacagaaagacatcc
caggatgctttggaattttctggcttaggcctggatgaaggactgtgata
tagagatgcccaggaggaagcagagctaagcctgaaccacaggagcaagt
ggtaaagacagtgtagatggaaccacaaggccactgaaagcactgccttg
attggttgtgttttgcttcattaaaaaaaatacaacaacaacgacgacga
caacagatatccacatttttcaaaacacagaagtaaaactttggatagat
ttcctcaaaggcaacctagtgagagcttggcagagcctctgctgtggggg
ttggtttagataaacaaaggccttggggaaatgtgtaatctaagcttctc
cctatggtccatgccagcaagcattttagctgccaataagtagacatgct
ttttgattccaaaaataaaatgtgattataccctcactacactagtctac
cctgaccattctatgggccatcacatgaagaaaaggagcaatgcattttg
tggtagtgttttttggtaagttaccatttagaaaaactcttgagtgcgtg
ctgtcatagagaagctggctgctgtgggcagacattgaccacctaataga
gcctctgaaagtgcttctcctgcagggacattgggctttcataagtaaag
ccatggctctctcttctgaccctagaagttccctctcattggggaggtat
atg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_62527379_62527946
seq2: B6Ng01-113G21.b_48_615

seq1  GAATTCAAGAAAGGGGTGCTGTCAGAAGCAGAGAGGTCTCTAGTCAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAAGGGGTGCTGTCAGAAGCAGAGAGGTCTCTAGTCAAATT  50

seq1  CTCTTTAAGAAAGAAATGTCCATAGCACCCAGAGGAGGCCCCACTCCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTAAGAAAGAAATGTCCATAGCACCCAGAGGAGGCCCCACTCCAAG  100

seq1  GCACTCTAGTATGCCCAGGATCATAGGATCAGGGGTGAGTAGGACACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTAGTATGCCCAGGATCATAGGATCAGGGGTGAGTAGGACACAAC  150

seq1  ATCTGTTCCAACACTACTGGGAGTAACTGGGACCAGCAGGATCCAGGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTCCAACACTACTGGGAGTAACTGGGACCAGCAGGATCCAGGGAC  200

seq1  ACAGGAACCCTGCCTGACCAAGTGGCTGGGGTTCCTTCCAGTCTGCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAACCCTGCCTGACCAAGTGGCTGGGGTTCCTTCCAGTCTGCACTG  250

seq1  GTTTACCTTGGGTGTGAACTCTTTAGCCAGTCCCACAGCACTCAGAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCTTGGGTGTGAACTCTTTAGCCAGTCCCACAGCACTCAGAAGAG  300

seq1  GCTCAAACACCAGAAGCTCTAACACACCCAGGATTACAGGATCCCTGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAACACCAGAAGCTCTAACACACCCAGGATTACAGGATCCCTGGAT  350

seq1  CCTAGGAGCTTGGTCACACCACGTCCTCAGGGTCCTAGAGCAGCTTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGAGCTTGGTCACACCACGTCCTCAGGGTCCTAGAGCAGCTTGAGT  400

seq1  TCCAGGAACTCTGAAATACCTAGAATCTCAGGATCACAGGATCCTGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAACTCTGAAATACCTAGAATCTCAGGATCACAGGATCCTGAAAT  450

seq1  CACAGGATCACAGAGACAGCTGGACTCTGAGGAGTCCTGACACAACCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGATCACAGAGACAGCTGGACTCTGAGGAGTCCTGACACAACCTGG  500

seq1  ATTACAGGAAGGACAGGATCCAGTCAAATATAGCAAGGGCAGGTAGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGGAAGGACAGGATCCAGTCAAATATAGCAAGGGCAGGTAGCACA  550

seq1  AAAGATGATTAGATGGTG  568
      ||||||||||||||||||
seq2  AAAGATGATTAGATGGTG  568

seq1: chr14_62675791_62676791
seq2: B6Ng01-113G21.g_69_1071 (reverse)

seq1  CATATACAT-CACAATGAGAGGGAAC-TCTAGGGTCAGAA-AGAGAGCCA  47
      ||||||| | | |||||||||||||| ||||||||||||| |||||||||
seq2  CATATACCTCCCCAATGAGAGGGAACTTCTAGGGTCAGAAGAGAGAGCCA  50

seq1  TGGCTTTACTAATGAAAGCCATATGTCCCTGGCAGGAGAAGCACTTTCAG  97
      |||||||||| |||||||||  |||||||| |||||||||||||||||||
seq2  TGGCTTTACTTATGAAAGCCCAATGTCCCT-GCAGGAGAAGCACTTTCAG  99

seq1  AGGCTCTATTAGGTGGTCAATGTCTGCCCACAGCAGCCAGCTTCTCTATG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTATTAGGTGGTCAATGTCTGCCCACAGCAGCCAGCTTCTCTATG  149

seq1  ACAGCACGCACTCAAGAGTTTTTCTAAATGGTAACTTACCAAAAAACACT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACGCACTCAAGAGTTTTTCTAAATGGTAACTTACCAAAAAACACT  199

seq1  ACCACAAAATGCATTGCTCCTTTTCTTCATGTGATGGCCCATAGAATGGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAAAATGCATTGCTCCTTTTCTTCATGTGATGGCCCATAGAATGGT  249

seq1  CAGGGTAGACTAGTGTAGTGAGGGTATAATCACATTTTATTTTTGGAATC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTAGACTAGTGTAGTGAGGGTATAATCACATTTTATTTTTGGAATC  299

seq1  AAAAAGCATGTCTACTTATTGGCAGCTAAAATGCTTGCTGGCATGGACCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCATGTCTACTTATTGGCAGCTAAAATGCTTGCTGGCATGGACCA  349

seq1  TAGGGAGAAGCTTAGATTACACATTTCCCCAAGGCCTTTGTTTATCTAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGAAGCTTAGATTACACATTTCCCCAAGGCCTTTGTTTATCTAAA  399

seq1  CCAACCCCCACAGCAGAGGCTCTGCCAAGCTCTCACTAGGTTGCCTTTGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCCCACAGCAGAGGCTCTGCCAAGCTCTCACTAGGTTGCCTTTGA  449

seq1  GGAAATCTATCCAAAGTTTTACTTCTGTGTTTTGAAAAATGTGGATATCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCTATCCAAAGTTTTACTTCTGTGTTTTGAAAAATGTGGATATCT  499

seq1  GTTGTCGTCGTCGTTGTTGTTGTATTTTTTTTAATGAAGCAAAACACAAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCGTCGTCGTTGTTGTTGTATTTTTTTTAATGAAGCAAAACACAAC  549

seq1  CAATCAAGGCAGTGCTTTCAGTGGCCTTGTGGTTCCATCTACACTGTCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAAGGCAGTGCTTTCAGTGGCCTTGTGGTTCCATCTACACTGTCTT  599

seq1  TACCACTTGCTCCTGTGGTTCAGGCTTAGCTCTGCTTCCTCCTGGGCATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACTTGCTCCTGTGGTTCAGGCTTAGCTCTGCTTCCTCCTGGGCATC  649

seq1  TCTATATCACAGTCCTTCATCCAGGCCTAAGCCAGAAAATTCCAAAGCAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATCACAGTCCTTCATCCAGGCCTAAGCCAGAAAATTCCAAAGCAT  699

seq1  CCTGGGATGTCTTTCTGTCTTCAGCTGTGTTTCTAAGGGGCAGTCAACTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGATGTCTTTCTGTCTTCAGCTGTGTTTCTAAGGGGCAGTCAACTG  749

seq1  TTGTTGCACAGGTATTAAGAAATCAACCCACTGCCAACCTGTGATAAAGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGCACAGGTATTAAGAAATCAACCCACTGCCAACCTGTGATAAAGG  799

seq1  GATCAACACAGGCAAGCCCTATGTGCAGTGAGAGTCGTAAACATCTGAGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAACACAGGCAAGCCCTATGTGCAGTGAGAGTCGTAAACATCTGAGT  849

seq1  CAGAGGTCCTGCAGTAGAAACTGAGTTGAATTCAGAGAATAAAAACCAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTCCTGCAGTAGAAACTGAGTTGAATTCAGAGAATAAAAACCAAT  899

seq1  GGGTCTTCTTACTAAGAATCAAAGATCTTGGGTTCTAGTTCTAGCTCTAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTCTTACTAAGAATCAAAGATCTTGGGTTCTAGTTCTAGCTCTAT  949

seq1  GTCTATCTAGCTCAATGGACAGAGTCATCTACTAATGCCTGTGTTAGTGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCTAGCTCAATGGACAGAGTCATCTACTAATGCCTGTGTTAGTGA  999

seq1  ATTC  1001
      ||||
seq2  ATTC  1003