BAC Information

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BAC

Clone NameB6Ng01-113I17
Chromosome14 (Build37)
Map Location 59,758,044 - 59,977,137
singlet/doubletdoublet
Overlap gene1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e
Upstream geneEG668177, EG668182
Downstream geneEG628705, Setdb2, Cab39l, Cdadc1, Tmem46, Atp8a2, LOC668162, LOC628768, Nupl1, Mtmr6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113I17.bB6Ng01-113I17.g
ACCDH919312DH919313
length969934
definitionDH919312|Mus musculus domesticus DNA, BAC clone: B6Ng01-113I17, 5' end.DH919313|Mus musculus domesticus DNA, BAC clone: B6Ng01-113I17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,758,044 - 59,759,012)(59,976,202 - 59,977,137)
sequence
gaattccagattacttcttaaaggtctcgagctcctgaacctaatgttta
taggagtactatttgctgacaatgctagctagaggcattgtctccagctt
tacactgataaacaagcaagtggaatttgttggccataggtaggtagcat
gaacaagcacagcctctgatctcaaatgtgcagcagaagtggctgagctg
tgttcctagccaggacagccacacctgtgcttctttgtcttgatgaactt
gctatggaatgtcctagcagatccaagtggcagcccgaccacagggcagc
ctcagcctgtgcacatcagattattatctgtgagagagaaagtagtgtga
gaagtttgagtttcctgacatgcgaatggggtgaggttttatcttaccct
ctggtttctccatcccgaaatgttatttggtaaaacttgcgttcttgacc
aatgacaattcattctgtcctgagatagttttcaaacagatcaggttatt
atttgtatttccaatttcatctctatataaacccatgttagtcatgtaga
agcctacatttcttgaggcctttcagtgtgacaggcaccctcaagagtaa
tcaccaagatcactgatttgcccctcctaaccagttccagactaccatca
agtctccagttataactggattgctgagcttttccagacaaaccaagata
aacaagtgtgacactgagtccatattcaaaccctggcaagaatggaccct
gtcctgtcctgtctttttaaggcagcaactccatttgcatctgtacttgc
cagtgtttcctgagtgaaggcatcaagatcatccagggattgagcatctt
ccacttcatgattttcagtctctgtccctgggctgcagattccctggtac
ctgaggaacagtgagattcatgaccagatctagggctctcagttataggg
aaaaccaggttattccctg
gaattcccaagggaagtgttgggttgtcattgctgtggtgaagcacaagg
acccaagctagttggggaggtaagggttttttagcttatatatccaactc
atagtccttcatgaattaagtcaaacaggaactcaaacagtgcaggaacc
tgtaggcaggagctgagacagaggccatgggtgggtcctgcatttttttt
ttttttttttggtttttcgagactgtgtttctctgtatagcctggctgtc
ctggaactcacattttagaccaggctggcttcgaactcagaaatccgcct
gcctctgcctcctgagtactgggattaaaggcgtgtgccaccacgcccgg
cgatgggtcctgcttaatggcttgctccacatcacttgctcagtctgatt
tcttataggatccagggatgccaggccagatagctccatccacagtattc
tggaccagtccctgtccatcactaattaagtaaatgctctacaggctctc
ctacagtccagtcttctgtaggcattttgtcaattgacgttctgacctct
cacagggcttatcatcactgcagaactgtcagcaagtgtgttgttagata
gcagtctcttgtgtctctctgttcatgcaactctgctgttcctccacaat
taaataagtgctctaaactaagagctttgatttaaaagtctacccatatg
ttaatctcgttattcacctacatttgacctttccatgtgtgttttcctta
cattttatgatgggatttcttcttgggatgctaaactactgtatgttgct
ttatagagtggcctcattgggcttagacatccgccaaagtatggagccag
tcatcttgctcatggctggctgcctgtcatcacaacaataagcctggatg
gaaggctggcataccgagttgtatcatgggctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_59758044_59759012
seq2: B6Ng01-113I17.b_49_1017

seq1  GAATTCCAGATTACTTCTTAAAGGTCTCGAGCTCCTGAACCTAATGTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATTACTTCTTAAAGGTCTCGAGCTCCTGAACCTAATGTTTA  50

seq1  TAGGAGTACTATTTGCTGACAATGCTAGCTAGAGGCATTGTCTCCAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTACTATTTGCTGACAATGCTAGCTAGAGGCATTGTCTCCAGCTT  100

seq1  TACACTGATAAACAAGCAAGTGGAATTTGTTGGCCATAGGTAGGTAGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGATAAACAAGCAAGTGGAATTTGTTGGCCATAGGTAGGTAGCAT  150

seq1  GAACAAGCACAGCCTCTGATCTCAAATGTGCAGCAGAAGTGGCTGAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGCACAGCCTCTGATCTCAAATGTGCAGCAGAAGTGGCTGAGCTG  200

seq1  TGTTCCTAGCCAGGACAGCCACACCTGTGCTTCTTTGTCTTGATGAACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTAGCCAGGACAGCCACACCTGTGCTTCTTTGTCTTGATGAACTT  250

seq1  GCTATGGAATGTCCTAGCAGATCCAAGTGGCAGCCCGACCACAGGGCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGGAATGTCCTAGCAGATCCAAGTGGCAGCCCGACCACAGGGCAGC  300

seq1  CTCAGCCTGTGCACATCAGATTATTATCTGTGAGAGAGAAAGTAGTGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCTGTGCACATCAGATTATTATCTGTGAGAGAGAAAGTAGTGTGA  350

seq1  GAAGTTTGAGTTTCCTGACATGCGAATGGGGTGAGGTTTTATCTTACCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTGAGTTTCCTGACATGCGAATGGGGTGAGGTTTTATCTTACCCT  400

seq1  CTGGTTTCTCCATCCCGAAATGTTATTTGGTAAAACTTGCGTTCTTGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTCTCCATCCCGAAATGTTATTTGGTAAAACTTGCGTTCTTGACC  450

seq1  AATGACAATTCATTCTGTCCTGAGATAGTTTTCAAACAGATCAGGTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAATTCATTCTGTCCTGAGATAGTTTTCAAACAGATCAGGTTATT  500

seq1  ATTTGTATTTCCAATTTCATCTCTATATAAACCCATGTTAGTCATGTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATTTCCAATTTCATCTCTATATAAACCCATGTTAGTCATGTAGA  550

seq1  AGCCTACATTTCTTGAGGCCTTTCAGTGTGACAGGCACCCTCAAGAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTACATTTCTTGAGGCCTTTCAGTGTGACAGGCACCCTCAAGAGTAA  600

seq1  TCACCAAGATCACTGATTTGCCCCTCCTAACCAGTTCCAGACTACCATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAAGATCACTGATTTGCCCCTCCTAACCAGTTCCAGACTACCATCA  650

seq1  AGTCTCCAGTTATAACTGGATTGCTGAGC-TTTCCAGACAAACCAAGATA  699
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGTCTCCAGTTATAACTGGATTGCTGAGCTTTTCCAGACAAACCAAGATA  700

seq1  AACAAGTGTGACACTGAGTCCATATTCAAACCCTGGCAAGAATGGACCCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTGTGACACTGAGTCCATATTCAAACCCTGGCAAGAATGGACCCT  750

seq1  GTCCTGTCCTGTC-TTTTAAGGCAGCAACTCCA-TTGCATCTGTACTTGC  797
      ||||||||||||| ||||||||||||||||||| ||||||||||||||||
seq2  GTCCTGTCCTGTCTTTTTAAGGCAGCAACTCCATTTGCATCTGTACTTGC  800

seq1  CAGTGTTTCCTGAGTGAAGGCATCAAGATCATCCAGGGATTGAGCATCTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTTCCTGAGTGAAGGCATCAAGATCATCCAGGGATTGAGCATCTT  850

seq1  CCACTTCATGATTTCCAGTCTCTGTCCCT-GGCTGCAGATTCCCTGGTAC  896
      |||||||||||||| |||||||||||||| ||||||||||||||||||||
seq2  CCACTTCATGATTTTCAGTCTCTGTCCCTGGGCTGCAGATTCCCTGGTAC  900

seq1  CTGAGGAAACAGTGAGATTCATGACCAGTTCTAGGTCTCTCAGTTCATAG  946
      |||||| ||||||||||||||||||||| |||||| ||||||||| ||||
seq2  CTGAGG-AACAGTGAGATTCATGACCAGATCTAGGGCTCTCAGTT-ATAG  948

seq1  GGAAAAGCTAGGTTATTACCCTG  969
      |||||| | |||||||| |||||
seq2  GGAAAA-CCAGGTTATT-CCCTG  969

seq1: chr14_59976202_59977137
seq2: B6Ng01-113I17.g_69_1002 (reverse)

seq1  GTAGACCATGATACAACTCTGTATGCCAGCCTTCCATTCCAGGCTTATTG  50
      |||| |||||||||||||| |||||||||||||||| |||||||||||||
seq2  GTAGCCCATGATACAACTCGGTATGCCAGCCTTCCA-TCCAGGCTTATTG  49

seq1  -TGTGATGACAGGCAAGCCAGCCATGAGCAAGGATGACTGGCTCCATACT  99
       ||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  TTGTGATGACAGGC-AGCCAGCCATGAGCAA-GATGACTGGCTCCATACT  97

seq1  TTGGCGGATGTCTAAGCCCAATGAGGCCACTCTATAAAGCAACATACAGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCGGATGTCTAAGCCCAATGAGGCCACTCTATAAAGCAACATACAGT  147

seq1  AGTTGTAGCATCCCAAGAAAGAATCCCATCATAAAATGTAAGG-AAACAC  198
      |||| ||||||||||||||  |||||||||||||||||||||| ||||||
seq2  AGTT-TAGCATCCCAAGAAGAAATCCCATCATAAAATGTAAGGAAAACAC  196

seq1  ACATGGAAAGGTCAAATGTAGGTGAATAACGAGATTAACATATGGGTAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAAAGGTCAAATGTAGGTGAATAACGAGATTAACATATGGGTAGA  246

seq1  CTTTTAAATCAAAGCTCTTAGTTTAGAGCACTTATTTAATTGTGGAGGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAATCAAAGCTCTTAGTTTAGAGCACTTATTTAATTGTGGAGGAA  296

seq1  CAGCAGAGTTGCATGAACAGAGAGACACAAGAGACTGCTATCTAACAACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAGTTGCATGAACAGAGAGACACAAGAGACTGCTATCTAACAACA  346

seq1  CACTTGCTGACAGTTCTGCAGTGATGATAAGCCCTGTGAGAGGTCAGAAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCTGACAGTTCTGCAGTGATGATAAGCCCTGTGAGAGGTCAGAAC  396

seq1  GTCAATTGACAAAATGCCTACAGAAGACTGGACTGTAGGAGAGCCTGTAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTGACAAAATGCCTACAGAAGACTGGACTGTAGGAGAGCCTGTAG  446

seq1  AGCATTTACTTAATTAGTGATGGACAGGGACTGGTCCAGAATACTGTGGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTACTTAATTAGTGATGGACAGGGACTGGTCCAGAATACTGTGGA  496

seq1  TGGAGCTATCTGGCCTGGCATCCCTGGATCCTATAAGAAATCAGACTGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTATCTGGCCTGGCATCCCTGGATCCTATAAGAAATCAGACTGAG  546

seq1  CAAGTGATGTGGAGCAAGCCATTAAGCAGGACCCATCGCCGGGCGTGGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGATGTGGAGCAAGCCATTAAGCAGGACCCATCGCCGGGCGTGGTG  596

seq1  GCACACGCCTTTAATCCCAGTACTCAGGAGGCAGAGGCAGGCGGATTTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACGCCTTTAATCCCAGTACTCAGGAGGCAGAGGCAGGCGGATTTCT  646

seq1  GAGTTCGAAGCCAGCCTGGTCTAAAATGTGAGTTCCAGGACAGCCAGGCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCGAAGCCAGCCTGGTCTAAAATGTGAGTTCCAGGACAGCCAGGCT  696

seq1  ATACAGAGAAACACAGTCTCGAAAAACCAAAAAAAAAAAAAAAAAATGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAGAAACACAGTCTCGAAAAACCAAAAAAAAAAAAAAAAAATGCA  746

seq1  GGACCCACCCATGGCCTCTGTCTCAGCTCCTGCCTACAGGTTCCTGCACT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCACCCATGGCCTCTGTCTCAGCTCCTGCCTACAGGTTCCTGCACT  796

seq1  GTTTGAGTTCCTGTTTGACTTAATTCATGAAGGACTATGAGTTGGATATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGTTCCTGTTTGACTTAATTCATGAAGGACTATGAGTTGGATATA  846

seq1  TAAGCTAAAAAACCCTTACCTCCCCAACTAGCTTGGGTCCTTGTGCTTCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTAAAAAACCCTTACCTCCCCAACTAGCTTGGGTCCTTGTGCTTCA  896

seq1  CCACAGCAATGACAACCCAACACTTCCCTTGGGAATTC  936
      ||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCAATGACAACCCAACACTTCCCTTGGGAATTC  934