BAC Information

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BAC

Clone NameB6Ng01-114N07
Chromosome14 (Build37)
Map Location 123,653,482 - 123,654,630
singlet/doubletsinglet
Overlap genenone
Upstream geneClybl, EG328479, EG432907, Zic5, Zic2, ENSMUSG00000075465, LOC668847, Pcca, BC006662, 4930594M22Rik, Tmtc4
Downstream geneVgcnl1, Itgbl1, LOC668700, Fgf14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114N07.bB6Ng01-114N07.g
ACCDH920252DH920253
length1,1441,154
definitionDH920252|Mus musculus domesticus DNA, BAC clone: B6Ng01-114N07, 5' end.DH920253|Mus musculus domesticus DNA, BAC clone: B6Ng01-114N07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctaggatttcacatataattatttagatgtcactgaaaatta
ttgcttaagggaatattttggaaagcacataatttttgaacaatgaaatt
gtatccttctctctattggatgaaagagttcaatgtagttatgtatgact
taacagtaggcatacattctggaaaatgtcattaggtaatttgatcattg
tctgaatattatcaactatataagcatagatttactattctactactgta
taatgtaaagcacactatgaatcctagggccatgatgaataaaggaaggg
agtttaagtcaaaaacacatgagggctggagctatacatcagtggtagag
ttctttcttgtcttgcaagaactagaccctgggtctgatctattgcacaa
caaacaaagcatctttaaacataagatagaaagaagcaatcaagagacaa
gatgagggatggtgagagttcagaagatggttcagttggtaaagtgcttg
ccttgtaagtctgagggtctgagttaaacttccagcactcacgcccagaa
gctgggtgtggtaacataagcttgtgattacagagctggggagggaaaca
caagtggggtccctggagctcataggtcagtctatctggcttcatcagtg
tgtttaaagctagggagagaccctgtctcaaatgtcaatttatataacgc
atgaggaataaagcctgagactgacctctgacctccacatatacaggtac
acacctgtacacaaagattgcattcacgcaaacatactctcacacataaa
aagacatggtgagtaggtggtaaatgaaacttttgctgacaaaacttggt
agatttatagctttttgtgtaagtagaaggaagtgtgttcatcataaaaa
ttagtataagaatatgcaaaccaatagcatgggccctattattagtgtat
atactcacatagacatgcttttatgccactgtctacacagtagctttgtt
gatacagcaccaccactaagacgagaaatggttgtggtcatgttcacagg
caatagaatttccagcttccacttgaaattttttttggagggggacactt
cttaaggggcatgcattgtgacacacaacagctagtgtgacatg
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttatagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgcccgggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggagagctagagaaagtagccaaggagctaaagggatctgcaccctta
tagtgaacaacattatgagctaccagtaccccggagctcttgactctagc
tgcaaatatatcaaagatgctagtcgcatcactgaagagagccaattgac
tgcacttatatgccagtaggatacaagcaaggggatggttggcagggaag
tggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_123653482_123654630
seq2: B6Ng01-114N07.b_44_1187

seq1  GAATTCTTCTAGGATTTCACATATAATTATTTAGATGTCACTGAAAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTAGGATTTCACATATAATTATTTAGATGTCACTGAAAATTA  50

seq1  TTGCTTAAGGGAATATTTTGGAAAGCACATAATTTTTGAACAATGAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTAAGGGAATATTTTGGAAAGCACATAATTTTTGAACAATGAAATT  100

seq1  GTATCCTTCTCTCTATTGGATGAAAGAGTTCAATGTAGTTATGTATGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCTTCTCTCTATTGGATGAAAGAGTTCAATGTAGTTATGTATGACT  150

seq1  TAACAGTAGGCATACATTCTGGAAAATGTCATTAGGTAATTTGATCATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTAGGCATACATTCTGGAAAATGTCATTAGGTAATTTGATCATTG  200

seq1  TCTGAATATTATCAACTATATAAGCATAGATTTACTATTCTACTACTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATATTATCAACTATATAAGCATAGATTTACTATTCTACTACTGTA  250

seq1  TAATGTAAAGCACACTATGAATCCTAGGGCCATGATGAATAAAGGAAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTAAAGCACACTATGAATCCTAGGGCCATGATGAATAAAGGAAGGG  300

seq1  AGTTTAAGTCAAAAACACATGAGGGCTGGAGCTATACATCAGTGGTAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAAGTCAAAAACACATGAGGGCTGGAGCTATACATCAGTGGTAGAG  350

seq1  TTCTTTCTTGTCTTGCAAGAACTAGACCCTGGGTCTGATCTATTGCACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTGTCTTGCAAGAACTAGACCCTGGGTCTGATCTATTGCACAA  400

seq1  CAAACAAAGCATCTTTAAACATAAGATAGAAAGAAGCAATCAAGAGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAGCATCTTTAAACATAAGATAGAAAGAAGCAATCAAGAGACAA  450

seq1  GATGAGGGATGGTGAGAGTTCAGAAGATGGTTCAGTTGGTAAAGTGCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGGATGGTGAGAGTTCAGAAGATGGTTCAGTTGGTAAAGTGCTTG  500

seq1  CCTTGTAAGTCTGAGGGTCTGAGTTAAACTTCCAGCACTCACGCCCAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTAAGTCTGAGGGTCTGAGTTAAACTTCCAGCACTCACGCCCAGAA  550

seq1  GCTGGGTGTGGTAACATAAGCTTGTGATTACAGAGCTGGGGAGGGAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTGTGGTAACATAAGCTTGTGATTACAGAGCTGGGGAGGGAAACA  600

seq1  CAAGTGGGGTCCCTGGAGCTCATAGGTCAGTCTATCTGGCTTCATCAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGGGTCCCTGGAGCTCATAGGTCAGTCTATCTGGCTTCATCAGTG  650

seq1  TGTTTAAAGCTAGGGAGAGACCCTGTCTCAAATGTCAATTTATATAACGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAGCTAGGGAGAGACCCTGTCTCAAATGTCAATTTATATAACGC  700

seq1  ATGAGGAATAAAGCCTGAGACTGACCTCTGACCTCCACATATACAGGTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAATAAAGCCTGAGACTGACCTCTGACCTCCACATATACAGGTAC  750

seq1  ACACCTGTACACAAAGATTGCATTCACGCAAACATACTCTCACACATAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGTACACAAAGATTGCATTCACGCAAACATACTCTCACACATAAA  800

seq1  AAGACATGGTGAGTAGGTGGTAAATGAAACTTTTGCTGACAAAACTTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATGGTGAGTAGGTGGTAAATGAAACTTTTGCTGACAAAACTTGGT  850

seq1  AGATTTATAGCTTTTTGTGTAAGTAGAAGGAAGTGTGTTCATCATAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTATAGCTTTTTGTGTAAGTAGAAGGAAGTGTGTTCATCATAAAAA  900

seq1  TTAGTATAAGAAATATGCAAACCAATAGCATGGCCCCTATTATTAAGTGT  950
      |||||||||| |||||||||||||||||||||| |||||||||| |||||
seq2  TTAGTATAAG-AATATGCAAACCAATAGCATGGGCCCTATTATT-AGTGT  948

seq1  ATATACTCACATAGACATGCTTTTATGCCACTGTCTACACAGTAGCTTTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTCACATAGACATGCTTTTATGCCACTGTCTACACAGTAGCTTTG  998

seq1  TTGATACCAGCACCACCACAAAGACGAGACATGGTTGT-GCCATGTCACC  1049
      |||||| |||||||||||| ||||||||| |||||||| | |||||   |
seq2  TTGATA-CAGCACCACCACTAAGACGAGAAATGGTTGTGGTCATGTTCAC  1047

seq1  AGGCAATAGGAATTTTCCAGC-TCCACTTTGAATTTTTTTTTTTGGAGGG  1098
      |||||||||  | |||||||| |||||||  ||   ||||||||||||||
seq2  AGGCAATAG--AATTTCCAGCTTCCACTTGAAA---TTTTTTTTGGAGGG  1092

seq1  GG-CACTTTCTTAGGTGTCATGCATTGTTGACA-ACAACAG-TCATGTGA  1145
      || ||| |||||| | | ||||||||| ||||| ||||||| |  |||||
seq2  GGACAC-TTCTTAAGGGGCATGCATTG-TGACACACAACAGCTAGTGTGA  1140

seq1  CATG  1149
      ||||
seq2  CATG  1144