BAC Information

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BAC

Clone NameB6Ng01-115H05
Chromosome14 (Build37)
Map Location 86,566,535 - 86,706,986
singlet/doubletdoublet
Overlap geneLOC100043301, EG629815
Upstream geneLOC668603
Downstream geneLOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3, EG665324
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115H05.bB6Ng01-115H05.g
ACCDH920715DH920716
length1881,135
definitionDH920715|Mus musculus domesticus DNA, BAC clone: B6Ng01-115H05, 5' end.DH920716|Mus musculus domesticus DNA, BAC clone: B6Ng01-115H05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,706,799 - 86,706,986)(86,566,535 - 86,567,684)
sequence
cagaggaaaatgaaagttgagggaaaaaagaaaaccctttttattaatca
cacattagatagttctgagggaataactgatccccacattagaattaact
tttaaaaattgcatttatttgtgtgtgtttgtctgcattcgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtg
gaattctgctggaacctgggagcaagcaaggcaaaggaaagaagtgtgca
aaggaaagaatactgattctcataagaggcttgaaaggtctgcaggagca
ggataaacctagcctggttggagttgatctttggtgtttgggagttacat
gacaggaacatggaaagctaagggaattccagtatggaaaacttggaagg
ttccagaaagtttcagctttttcatgtaggtgttaatttattttgtggag
gaaaaacataacattccataaactcagtattcttctgtatggtaaataaa
ttttggtcaaataaccaagaatagccattcgattgagatggatgattaca
acacagtggtttggaaattctctgttatgattcaattcagcagtgtttgc
aaacctatctgcttgagccataaagatagaggctgccttgaatcgtggta
ccagattggaaaggaaggaaggccgagctgggtgtgagacaagtaaggga
atattctgttatagtatgtcatattcgggaaggcagcaaaaacaaaacag
tgaaagcatgaggaggggagagctgataagagttgatagatgcagcattg
taaggcaagagcttggggttataatcaatcaagatacagcacttcagtat
gacattgagacgaaaatataagacatatttagtctgctggatgcatgatt
gtgactttgtctcaacgatgagcagctcttgatcagctctttagcctatg
ttggatataggtaagtaaatgtagatagagaattataaaaatcagttatt
tgtatttaattactaaacttaatatcatagctaatacaataaatggatat
ataagttttatcagtatgaagagtaaaggaacacaaccaaaggggtaaca
gtagtaggaaatcagcattttgttaaatcggtccttaaatcattgctaaa
atatggctagatccttagctcatggagaaaagaaatggtcaagaaacacc
tcaaagatttagaaaagccaccacccatgcgtgtgtgcacacccttcact
cactcccccccttccaacccccccccccccccgcttcatttttcttctca
ggaatgtcctagattgagaggtagcacgtactagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86706799_86706986
seq2: B6Ng01-115H05.b_51_238 (reverse)

seq1  CACCACACACACACACACACACACACACACACACACACACACACACACGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACACACACACACACACACACACACACACACACACACACACACACGA  50

seq1  ATGCAGACAAACACACACAAATAAATGCAATTTTTAAAAGTTAATTCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGACAAACACACACAAATAAATGCAATTTTTAAAAGTTAATTCTAA  100

seq1  TGTGGGGATCAGTTATTCCCTCAGAACTATCTAATGTGTGATTAATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGATCAGTTATTCCCTCAGAACTATCTAATGTGTGATTAATAAAA  150

seq1  AGGGTTTTCTTTTTTCCCTCAACTTTCATTTTCCTCTG  188
      ||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTTCTTTTTTCCCTCAACTTTCATTTTCCTCTG  188

seq1: chr14_86566535_86567684
seq2: B6Ng01-115H05.g_68_1202

seq1  GAATTCTGCTGGAACCTGGGAGCAAGCAAGGCAAAGGAAAGAAGTGTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTGGAACCTGGGAGCAAGCAAGGCAAAGGAAAGAAGTGTGCA  50

seq1  AAGGAAAGAATACTGATTCTCATAAGAGGCTTGAAAGGTCTGCAGGAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGAATACTGATTCTCATAAGAGGCTTGAAAGGTCTGCAGGAGCA  100

seq1  GGATAAACCTAGCCTGGTTGGAGTTGATCTTTGGTGTTTGGGAGTTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAACCTAGCCTGGTTGGAGTTGATCTTTGGTGTTTGGGAGTTACAT  150

seq1  GACAGGAACATGGAAAGCTAAGGGAATTCCAGTATGGAAAACTTGGAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAACATGGAAAGCTAAGGGAATTCCAGTATGGAAAACTTGGAAGG  200

seq1  TTCCAGAAAGTTTCAGCTTTTTCATGTAGGTGTTAATTTATTTTGTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAAAGTTTCAGCTTTTTCATGTAGGTGTTAATTTATTTTGTGGAG  250

seq1  GAAAAACATAACATTCCATAAACTCAGTATTCTTCTGTATGGTAAATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACATAACATTCCATAAACTCAGTATTCTTCTGTATGGTAAATAAA  300

seq1  TTTTGGTCAAATAACCAAGAATAGCCATTCGATTGAGATGGATGATTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTCAAATAACCAAGAATAGCCATTCGATTGAGATGGATGATTACA  350

seq1  ACACAGTGGTTTGGAAATTCTCTGTTATGATTCAATTCAGCAGTGTTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTGGTTTGGAAATTCTCTGTTATGATTCAATTCAGCAGTGTTTGC  400

seq1  AAACCTATCTGCTTGAGCCATAAAGATAGAGGCTGCCTTGAATCGTGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTATCTGCTTGAGCCATAAAGATAGAGGCTGCCTTGAATCGTGGTA  450

seq1  CCAGATTGGAAAGGAAGGAAGGCCGAGCTGGGTGTGAGACAAGTAAGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTGGAAAGGAAGGAAGGCCGAGCTGGGTGTGAGACAAGTAAGGGA  500

seq1  ATATTCTGTTATAGTATGTCATATTCGGGAAGGCAGCAAAAACAAAACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTGTTATAGTATGTCATATTCGGGAAGGCAGCAAAAACAAAACAG  550

seq1  TGAAAGCATGAGGAGGGGAGAGCTGATAAGAGTTGATAGATGCAGCATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCATGAGGAGGGGAGAGCTGATAAGAGTTGATAGATGCAGCATTG  600

seq1  TAAGGCAAGAGCTTGGGGTTATAATCAATCAAGATACAGCACTTCAGTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAAGAGCTTGGGGTTATAATCAATCAAGATACAGCACTTCAGTAT  650

seq1  GACATTGAGACGAAAATATAAGACATATTTAGTCTGCTGGATGCATGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTGAGACGAAAATATAAGACATATTTAGTCTGCTGGATGCATGATT  700

seq1  GTGACTTTGTCTCAACGATGAGCAGCTCTTGATCAGCTCTTTAGCCTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTTGTCTCAACGATGAGCAGCTCTTGATCAGCTCTTTAGCCTATG  750

seq1  TTGGATATAGGTAAGTAAATGTAGATAGAGAATTATAAAAATCAGTTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATATAGGTAAGTAAATGTAGATAGAGAATTATAAAAATCAGTTATT  800

seq1  TGTATTTAATTACTAAACTTAATATCATAGCTAATACAATAAATGGATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTAATTACTAAACTTAATATCATAGCTAATACAATAAATGGATAT  850

seq1  ATAAGTTTTATCAGTATGAAGAGTAAAGGAACACAAACAAAGGGGTAACA  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATAAGTTTTATCAGTATGAAGAGTAAAGGAACACAACCAAAGGGGTAACA  900

seq1  GTAGTAGGAAATCAGCATTTTGTTAAATCGGTCCTAAAATCATTGCTAAA  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTAGTAGGAAATCAGCATTTTGTTAAATCGGTCCTTAAATCATTGCTAAA  950

seq1  ATATGGCTAGATCCTTAGCTCATGAAGAAAAGAAATGGTCAAAGAAACAC  1000
      |||||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  ATATGGCTAGATCCTTAGCTCATGGAGAAAAGAAATGGTC-AAGAAACAC  999

seq1  TCAAAAGATTTTAGAAAAAGGCACACACACATGCGTGTGTGCACACACTT  1050
         ||||| ||||| ||||| ||| ||| ||||||||||||||||| | |
seq2  CTCAAAGA-TTTAG-AAAAGCCAC-CACCCATGCGTGTGTGCACAC-CCT  1045

seq1  TCACTCACTCACACACATATACAAACACACACACACACACGCTATCATTT  1100
      |||||||||| | | |   | | ||| | | | | | | |||| ||||||
seq2  TCACTCACTCCCCCCC---TTCCAACCCCCCCCCCCCCCCGCT-TCATTT  1091

seq1  TTCTTCTCAGGAGATGTCCTAGGAATATGAAGAGGAAAGCACGTACTAGC  1150
      |||||||||||| |||||||||    ||  |||||  |||||||||||||
seq2  TTCTTCTCAGGA-ATGTCCTAG----ATTGAGAGG-TAGCACGTACTAGC  1135