BAC Information

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BAC

Clone NameB6Ng01-115O24
Chromosome14 (Build37)
Map Location 86,094,051 - 86,214,697
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC629794, LOC668603
Downstream geneLOC100043301, EG629815, LOC100043306, LOC100043778, LOC100043310, LOC100043311, Diap3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115O24.bB6Ng01-115O24.g
ACCDH921067DH921068
length1,162401
definitionDH921067|Mus musculus domesticus DNA, BAC clone: B6Ng01-115O24, 5' end.DH921068|Mus musculus domesticus DNA, BAC clone: B6Ng01-115O24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,094,051 - 86,095,244)(86,214,303 - 86,214,697)
sequence
gaattcattacacctcataattcttgccatcatttttcataaataattat
agtttcacttaatttcttcttcatggctataagtcatcttgtcaagagtc
atccttagcattgtatttaaccttttaagtgcttcttgaaaatgaaatta
tttcatgttgatggcatttccttcacacatataaacagtctcctgagtca
tagttgttaattcacctattgcctgacttgttccattaacacaggtctct
ggattctcagcatttgaatttgcagccctgacttagccaataaatactct
cattttatgtattttccacttcatttcttctgcctgaatccatctctctc
aaacacctttgtctttcaatgatttctcagttgaaaaagctgacttttag
aaagtgatctcggaacaagctaaagaatgtattgatttatgtttctgaaa
atcaaatagaaaggtaggaccaaataatattgatcacttggccataattc
cttatgattttaggggttcttcattccaaagtgtcagtgtaagccttatg
cttgcttccaatttgccttaagcacgatccaatgttagtcttaaagctca
caaccacataagaaggcatttccttcatcatacaacccaattcagaataa
aacatttttcctttaaaaaaaaataattatttatttgtttgtttgtttgt
ttgtttgtttgtttatttatttatttatttatttttgacagggtttttct
gtgtagccctggatgtcctggaactcgctctatcgaccagactgatattg
aactcagaaatctgtctggctctgcctcccaagtgctgggattaaaagca
tgcaccaccactgcctggaaagtgaaacctttttttattccattttgatt
ttcaacatttgcaggttgaacaggttcttcatttttaaatgattcttcat
taaagccaccctttagtcccttgtcaccctgagctaaatggtgcgtttag
tggttttctgatgtttatttattggtgatttgtatttgcagattatgttc
tatttgtgatgcagaaatatcagcaagacttatccatctatcaggaacta
gctctaccacctaagcctgaccttgtacagttggagaccgtaatggccta
atttttcatgtg
acttgatgaaagaagaggctatgacatcgcaaagacttcaagtgaaattt
tctttttttttctaagtctttacatatataggataaaattagaattttgc
taaagcatatttcacccatggcttctgaggcaatttttatacaagtgttt
tagtagagactagtaatataaagatctgagaagaaaaacgcatgatcata
aatatctaattgctagaaatttccttcaaggcgacacctgctccagttct
cctctccttttagccctgtacttctcctttcctttcctctccctattctc
aaatatatatatatgtgtgtgtgtgtgtgtctgtattgtgtgtatatata
ttgtatatatatatatgtatgtgtgtatatatatatgtgagatatataca
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_86094051_86095244
seq2: B6Ng01-115O24.b_48_1209

seq1  GAATTCATTACACCTCATAATTCTTGCCATCATTTTTCATAAATAATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACACCTCATAATTCTTGCCATCATTTTTCATAAATAATTAT  50

seq1  AGTTTCACTTAATTTCTTCTTCATGGCTATAAGTCATCTTGTCAAGAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCACTTAATTTCTTCTTCATGGCTATAAGTCATCTTGTCAAGAGTC  100

seq1  ATCCTTAGCATTGTATTTAACCTTTTAAGTGCTTCTTGAAAATGAAATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTAGCATTGTATTTAACCTTTTAAGTGCTTCTTGAAAATGAAATTA  150

seq1  TTTCATGTTGATGGCATTTCCTTCACACATATAAACAGTCTCCTGAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTTGATGGCATTTCCTTCACACATATAAACAGTCTCCTGAGTCA  200

seq1  TAGTTGTTAATTCACCTATTGCCTGACTTGTTCCATTAACACAGGTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGTTAATTCACCTATTGCCTGACTTGTTCCATTAACACAGGTCTCT  250

seq1  GGATTCTCAGCATTTGAATTTGCAGCCCTGACTTAGCCAATAAATACTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTCAGCATTTGAATTTGCAGCCCTGACTTAGCCAATAAATACTCT  300

seq1  CATTTTATGTATTTTCCACTTCATTTCTTCTGCCTGAATCCATCTCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATGTATTTTCCACTTCATTTCTTCTGCCTGAATCCATCTCTCTC  350

seq1  AAACACCTTTGTCTTTCAATGATTTCTCAGTTGAAAAAGCTGACTTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCTTTGTCTTTCAATGATTTCTCAGTTGAAAAAGCTGACTTTTAG  400

seq1  AAAGTGATCTCGGAACAAGCTAAAGAATGTATTGATTTATGTTTCTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGATCTCGGAACAAGCTAAAGAATGTATTGATTTATGTTTCTGAAA  450

seq1  ATCAAATAGAAAGGTAGGACCAAATAATATTGATCACTTGGCCATAATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATAGAAAGGTAGGACCAAATAATATTGATCACTTGGCCATAATTC  500

seq1  CTTATGATTTTAGGGGTTCTTCATTCCAAAGTGTCAGTGTAAGCCTTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGATTTTAGGGGTTCTTCATTCCAAAGTGTCAGTGTAAGCCTTATG  550

seq1  CTTGCTTCCAATTTGCCTTAAGCACGATCCAATGTTAGTCTTAAAGCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTCCAATTTGCCTTAAGCACGATCCAATGTTAGTCTTAAAGCTCA  600

seq1  CAACCACATAAGAAGGCATTTCCTTCATCATACAACCCAATTCAGAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACATAAGAAGGCATTTCCTTCATCATACAACCCAATTCAGAATAA  650

seq1  AACATTTTTCCTTTAAAAAAAAATAATTATTTATTTGTTTGTTTGTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTTCCTTTAAAAAAAAATAATTATTTATTTGTTTGTTTGTTTGT  700

seq1  TTGTTTGTTTGTTTATTTATTTATTTATTTATTTTTGACAGGGTTTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTATTTATTTATTTATTTATTTTTGACAGGGTTTTTCT  750

seq1  GTGTAGCCCTGGATGTCCTGGAACTCGCTCTATCGACCAGACTGATATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGCCCTGGATGTCCTGGAACTCGCTCTATCGACCAGACTGATATTG  800

seq1  AACTCAGAAATCTGTCTGGCTCTGCCTCCCAAGTGCTGGGATTAAAAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGAAATCTGTCTGGCTCTGCCTCCCAAGTGCTGGGATTAAAAGCA  850

seq1  TGCACCACCACTGCCTGGAAAGTGAAACCTTTTTTTATTCCATTTTGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCACCACTGCCTGGAAAGTGAAACCTTTTTTTATTCCATTTTGATT  900

seq1  TTCAACATTTGCAGGTTGAACAGGTTCTTCATTTTTAAATGATTCTTCAA  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTCAACATTTGCAGGTTGAACAGGTTCTTCATTTTTAAATGATTCTTC-A  949

seq1  TTAAAGCCACCCTTTAGTCCCTTGTCACCCTGAGCTAAAATGGTTGCGTT  1000
      |||||||||||||||||||||||||||||||||||| |||||| |||| |
seq2  TTAAAGCCACCCTTTAGTCCCTTGTCACCCTGAGCT-AAATGG-TGCG-T  996

seq1  TTAGTGGTTTTCTTGATTGTTTTTATTTTATTTGTGTTGATTTTTGTTAT  1050
      |||||||||||| ||| |||||    |||||| |||      |||||   
seq2  TTAGTGGTTTTC-TGA-TGTTT---ATTTATTGGTG-----ATTTGT--A  1034

seq1  TTTGCAGAATTATG-TCTATTTTGGTGATGCAAGATATATCAAACCAAAG  1099
      ||||||| |||||| |||||||  ||||||| ||| |||||  | |||  
seq2  TTTGCAG-ATTATGTTCTATTT--GTGATGC-AGAAATATC--AGCAA--  1076

seq1  AACTTATCCATTCTACCAAGGAACTAAAGCTCTAACCACTAAAGCTTAAA  1149
       ||||||||| |||| | |||||||  |||||| |||||  |||| | | 
seq2  GACTTATCCA-TCTATC-AGGAACT--AGCTCT-ACCACCTAAGCCTGA-  1120

seq1  CCTTTGTACAATGTGTGAACGTATAATGCCTAATTTTTCCATGTG  1194
       | ||||||| |  | || |||| |  ||||||||||| ||||||
seq2  -CCTTGTACAGTTGGAGACCGTA-ATGGCCTAATTTTT-CATGTG  1162

seq1: chr14_86214303_86214697
seq2: B6Ng01-115O24.g_68_462 (reverse)

seq1  CACATATATATATACACACATACATATATATATATACAATATATATACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATATATATACACACATACATATATATATATACAATATATATACAC  50

seq1  ACAATACAGACACACACACACACACATATATATATATTTGAGAATAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACAGACACACACACACACACATATATATATATTTGAGAATAGGGA  100

seq1  GAGGAAAGGAAAGGAGAAGTACAGGGCTAAAAGGAGAGGAGAACTGGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAGGAAAGGAGAAGTACAGGGCTAAAAGGAGAGGAGAACTGGAGC  150

seq1  AGGTGTCGCCTTGAAGGAAATTTCTAGCAATTAGATATTTATGATCATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTCGCCTTGAAGGAAATTTCTAGCAATTAGATATTTATGATCATGC  200

seq1  GTTTTTCTTCTCAGATCTTTATATTACTAGTCTCTACTAAAACACTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCTTCTCAGATCTTTATATTACTAGTCTCTACTAAAACACTTGTA  250

seq1  TAAAAATTGCCTCAGAAGCCATGGGTGAAATATGCTTTAGCAAAATTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTGCCTCAGAAGCCATGGGTGAAATATGCTTTAGCAAAATTCTA  300

seq1  ATTTTATCCTATATATGTAAAGACTTAGAAAAAAAAAGAAAATTTCACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATCCTATATATGTAAAGACTTAGAAAAAAAAAGAAAATTTCACTT  350

seq1  GAAGTCTTTGCGATGTCATAGCCTCTTCTTTCATCAAGTGAATTC  395
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTTTGCGATGTCATAGCCTCTTCTTTCATCAAGTGAATTC  395