BAC Information

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BAC

Clone NameB6Ng01-115P03
Chromosome14 (Build37)
Map Location 106,062,796 - 106,245,833
singlet/doubletdoublet
Overlap genenone
Upstream geneD130009I18Rik, LOC435420, Rbm26, LOC621103, LOC100043466, Ndfip2, LOC620376
Downstream geneLOC100043469, Spry2, EG621364, LOC212084, Trim52, LOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742, LOC668748
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115P03.bB6Ng01-115P03.g
ACCDH921073DH921074
length1,0861,155
definitionDH921073|Mus musculus domesticus DNA, BAC clone: B6Ng01-115P03, 5' end.DH921074|Mus musculus domesticus DNA, BAC clone: B6Ng01-115P03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,062,796 - 106,063,879)(106,244,673 - 106,245,833)
sequence
gaattccacccccccaacctccccccccccccccccccgtttgcttcctg
cttgttgttaaagttctgagctctcagcttactgttccagctgcctgcct
gcctgctgtgggtagcagtgcctccctctgaaactcctccttctaagttt
acagccacagaaaagtaaatgctacagcaagttttcaggccacggagagc
ctgtctcaacaaacaaggtggaatgttacccaaagtgcacttctggcctc
cacaaaactgtatcctatctcaaaaatacacacgcgcacacacacacaca
cacacacacacacacacacacacacacgcacgcacgcacgcacgcacgca
cgcacgcacgcacacacacacagagcaagaatttgaggtgtgctgttcta
caataactaccccacgacttgcaagaaacaggagcaattaatcaattttt
aaacatcatgtttattcccaaaataaacatgtgcagaaaaatatatgacc
taaacaatgttaattcaagtataaaaggaatattttattgccgaaattta
ttttgcaatctgaaaaaaaaatattttctagaacgtatagggtaatgaag
tttctgaaactagtaactatttcaataaggaaattaaatagtaataaaaa
tcaacattctggaatctttttttcatgggatcctatcaacaatgttaata
gaaaccctgccctccttggttttgaagactctgtcatttagtttcacagc
ataaggttttagtttatgtagtgtatgcgttcctagaaagtttcaaattt
aacattttatggtatcttttaaaattataaaaatgtatgaaagatcttgg
aagtagaatttaccgacaaatcccttggggctgtgaacaagtcttgtcac
atgcgttaaagtgtgcattccctcagtttgacttttggtggattgggata
tcatggcacagaaccggactgttcttatttttcctaatattataaaacaa
ggtaccaaaatgctgatcctcaaccagcatgtgtcctctttcatatcgta
aggatggatttctaagatgtaactactgtagcagat
gaattctgcccaaaacaggtgtagaatacctacaggtatagaagcaaaaa
ctattctaagtgataacattcaagtactttaaatcatgctgaatgtggtg
gcatatgcctttaatcccagtattcaagaagcagaggtaggcaagtcttg
tgggtttaaggtcagctggggcttcagagtaagaccctcctaaagggaca
ctcggcattcagcagacttacatatcactgatcaattctagataactggt
tcaaatgggagacatagcagtgtctttaacaattcttcaattcctgtcca
gcagacacctaaagttttcaggtttgcccccatcttattctgtggcttgt
aaaatctggtggatgagtttaagatagtccctaaagattcactgatgaca
gatagttcccactgctcacctgatatgagccccatttgaacttaagcatc
catctaaaacaaaatcgtgccggatcccaccctgttctctattttgttga
ttgttggtccgggtgcttttcttgatttatgactaaagatataaacctac
ttactggcagacttgtttcaatcaaagatgacagatattcagaactacat
caatttaaatgtacacagttgacaagggtatcaagtttcatgtgtcagat
aatagcaatagatcctcaagtgatattactccaatccaacattttggggc
tgatgatagcttatcttctatgctgaagaggactataactcttacactaa
actctagcagtgtccacctttcctaagatataaatggatataagatattt
tggggtcttcttcctaaagtcactctgcatttagtctatggtccatgaat
atttcttgtattctgttatctttatactactatacatagagagaactcta
atagaaaatactacagtgaatagatctagtagtcttctaggagacactag
cctctcattagtcagttccttgacctgctagaaaacaacaacccatgtcc
tttggctcctacaaatgtattatctagactcctcagacaaaatcagtgca
ccactttctcatcagaagcatggatttctacccttaagactacatcttta
attatagcatattggctgggttccattaattaatgtatctcacaggttca
tgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_106062796_106063879
seq2: B6Ng01-115P03.b_43_1128

seq1  GAATTCCACCCCCCCAACCTCCCCCCCCCCCCCCCCCCCCCGTTTGCTTC  50
      ||||||||||||||||||||   |||||||||||||||||||||||||||
seq2  GAATTCCACCCCCCCAACCT---CCCCCCCCCCCCCCCCCCGTTTGCTTC  47

seq1  CTGCTTGTTGTTAAAGTTCTGAGCTCTCAGCTTACTGTTCCAGCTGCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGTTGTTAAAGTTCTGAGCTCTCAGCTTACTGTTCCAGCTGCCTG  97

seq1  CCTGCCTGCTGTGGGTAGCAGTGCCTCCCTCTGAAACTCCTCCTTCTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTGCTGTGGGTAGCAGTGCCTCCCTCTGAAACTCCTCCTTCTAAG  147

seq1  TTTACAGCCACAGAAAAGTAAATGCTACAGCAAGTTTTCAGGCCACGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGCCACAGAAAAGTAAATGCTACAGCAAGTTTTCAGGCCACGGAG  197

seq1  AGCCTGTCTCAACAAACAAGGTGGAATGTTACCCAAAGTGCACTTCTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTCTCAACAAACAAGGTGGAATGTTACCCAAAGTGCACTTCTGGC  247

seq1  CTCCACAAAACTGTATCCTATCTCAAAAATACACACGCGCACACACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAAAACTGTATCCTATCTCAAAAATACACACGCGCACACACACAC  297

seq1  ACACACACACACACACACACACACACACACGCACGCACGCACGCACGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACGCACGCACGCACGCACGCAC  347

seq1  GCACGCACGCACGCACACACACACAGAGCAAGAATTTGAGGTGTGCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCACGCACGCACACACACACAGAGCAAGAATTTGAGGTGTGCTGTT  397

seq1  CTACAATAACTACCCCACGACTTGCAAGAAACAGGAGCAATTAATCAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATAACTACCCCACGACTTGCAAGAAACAGGAGCAATTAATCAATT  447

seq1  TTTAAACATCATGTTTATTCCCAAAATAAACATGTGCAGAAAAATATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACATCATGTTTATTCCCAAAATAAACATGTGCAGAAAAATATATG  497

seq1  ACCTAAACAATGTTAATTCAAGTATAAAAGGAATATTTTATTGCCGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAACAATGTTAATTCAAGTATAAAAGGAATATTTTATTGCCGAAAT  547

seq1  TTATTTTGCAATCTGAAAAAAAAATATTTTCTAGAACGTATAGGGTAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGCAATCTGAAAAAAAAATATTTTCTAGAACGTATAGGGTAATG  597

seq1  AAGTTTCTGAAACTAGTAACTATTTCAATAAGGAAATTAAATAGTAAT-A  649
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAGTTTCTGAAACTAGTAACTATTTCAATAAGGAAATTAAATAGTAATAA  647

seq1  AAATCAACATTCTGGAATC-TTTTTTCATGGGATCCTATCAACAATGTTA  698
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAATCAACATTCTGGAATCTTTTTTTCATGGGATCCTATCAACAATGTTA  697

seq1  ATAGAAACCCTGCCCTCCTTGG-TTTGAAGACTCTGTCATTTAGTTTCAC  747
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATAGAAACCCTGCCCTCCTTGGTTTTGAAGACTCTGTCATTTAGTTTCAC  747

seq1  AGCATAAGGTTTTAGTTTATGTAGTGTATGCGTTCCTAGAAAGTTTCAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAAGGTTTTAGTTTATGTAGTGTATGCGTTCCTAGAAAGTTTCAAA  797

seq1  TTTAACATTTTAATGGTATCTTTTAAAATTATAAAAATGTATGAAAGATC  847
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTAACATTTT-ATGGTATCTTTTAAAATTATAAAAATGTATGAAAGATC  846

seq1  TTGGAAGTAGAA-TTACCGACAAATTCCTTGTGAC-ATGAACAAGTCTTG  895
      |||||||||||| |||||||||||| ||||| | |  |||||||||||||
seq2  TTGGAAGTAGAATTTACCGACAAATCCCTTGGGGCTGTGAACAAGTCTTG  896

seq1  TCACATGCGTTAGAGTTGGCATTCCTTCAGTTTGACTTTT-GTGGATTGG  944
      |||||||||||| |||  ||||||| |||||||||||||| |||||||||
seq2  TCACATGCGTTAAAGTGTGCATTCCCTCAGTTTGACTTTTGGTGGATTGG  946

seq1  GATATCATGGTCACAGAACCGGACTGTTTTTATTTTTTCCTAATATTAT-  993
      |||||||||| ||||||||||||||||| ||| |||||||||||||||| 
seq2  GATATCATGG-CACAGAACCGGACTGTTCTTA-TTTTTCCTAATATTATA  994

seq1  AAACAAGGTTACAAGATGCTG-TTCTCAAACAGCATGTGTCTTCTTTTCG  1042
      |||||||||  ||| |||||| | ||||| ||||||||||| |||||   
seq2  AAACAAGGTACCAAAATGCTGATCCTCAACCAGCATGTGTCCTCTTTCAT  1044

seq1  ATCGTTAGGAGTGATTTCTAAAGATGTAAC-ACAGGAGCAGAT  1084
      ||||| ||||  ||||||| |||||||||| || | |||||||
seq2  ATCGTAAGGATGGATTTCT-AAGATGTAACTACTGTAGCAGAT  1086

seq1: chr14_106244673_106245833
seq2: B6Ng01-115P03.g_68_1222 (reverse)

seq1  AAACATGAACCTGTGAGGATCATTTATATTTAAATGGAACACAG-CAATA  49
      |||||||||||||||||   |||| |    | |||||||| ||| |||||
seq2  AAACATGAACCTGTGAGATACATTAA----TTAATGGAACCCAGCCAATA  46

seq1  TGCTATAATTAAAAGATGTAGTCTAAGGGGTAGAAATCCATTGCCTCTGA  99
      |||||||||| ||||||||||||| | ||||||||||||| ||| |||||
seq2  TGCTATAATT-AAAGATGTAGTCTTAAGGGTAGAAATCCA-TGCTTCTGA  94

seq1  TGGAGAAAGTGGTTGCACTGATTTTGTCCTGA-GAGTCTAGATAATACA-  147
      | |||||||||| |||||||||||||| |||| |||||||||||||||| 
seq2  T-GAGAAAGTGG-TGCACTGATTTTGT-CTGAGGAGTCTAGATAATACAT  141

seq1  TTGTAGGAGCCAAAGGACATGGGTTGTTGTTTTCTAGCAGGTCAAGGAAC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGGAGCCAAAGGACATGGGTTGTTGTTTTCTAGCAGGTCAAGGAAC  191

seq1  TGACTAATGAGAGGCTAGTGTCTCTTAGAGGACTACTAGATCTATTCACT  247
      |||||||||||||||||||||||| |||| ||||||||||||||||||||
seq2  TGACTAATGAGAGGCTAGTGTCTCCTAGAAGACTACTAGATCTATTCACT  241

seq1  GTAGTATTTTCTATTAGAGTTCTCTCTATGTATAGTAGTATAAAGATAAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTATTTTCTATTAGAGTTCTCTCTATGTATAGTAGTATAAAGATAAC  291

seq1  AGAATACAAGAAATATTCATGGACCATAGACTAAATGCAGAGTGACTTTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACAAGAAATATTCATGGACCATAGACTAAATGCAGAGTGACTTTA  341

seq1  GGAAGAAGACCCCAAAATATCTTATATCCATTTATATCTTAGGAAAGGTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAGACCCCAAAATATCTTATATCCATTTATATCTTAGGAAAGGTG  391

seq1  GACACTGCTAGAGTTTAGTGTAAGAGTTATAGTCCTCTTCAGCATAGAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGCTAGAGTTTAGTGTAAGAGTTATAGTCCTCTTCAGCATAGAAG  441

seq1  ATAAGCTATCATCAGCCCCAAAATGTTGGATTGGAGTAATATCACTTGAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCTATCATCAGCCCCAAAATGTTGGATTGGAGTAATATCACTTGAG  491

seq1  GATCTATTGCTATTATCTGACACATGAAACTTGATACCCTTGTCAACTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTATTGCTATTATCTGACACATGAAACTTGATACCCTTGTCAACTGT  541

seq1  GTACATTTAAATTGATGTAGTTCTGAATATCTGTCATCTTTGATTGAAAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTTAAATTGATGTAGTTCTGAATATCTGTCATCTTTGATTGAAAC  591

seq1  AAGTCTGCCAGTAAGTAGGTTTATATCTTTAGTCATAAATCAAGAAAAGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGCCAGTAAGTAGGTTTATATCTTTAGTCATAAATCAAGAAAAGC  641

seq1  ACCCGGACCAACAATCAACAAAATAGAGAACAGGGTGGGATCCGGCACGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGGACCAACAATCAACAAAATAGAGAACAGGGTGGGATCCGGCACGA  691

seq1  TTTTGTTTTAGATGGATGCTTAAGTTCAAATGGGGCTCATATCAGGTGAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTAGATGGATGCTTAAGTTCAAATGGGGCTCATATCAGGTGAG  741

seq1  CAGTGGGAACTATCTGTCATCAGTGAATCTTTAGGGACTATCTTAAACTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGAACTATCTGTCATCAGTGAATCTTTAGGGACTATCTTAAACTC  791

seq1  ATCCACCAGATTTTACAAGCCACAGAATAAGATGGGGGCAAACCTGAAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCAGATTTTACAAGCCACAGAATAAGATGGGGGCAAACCTGAAAA  841

seq1  CTTTAGGTGTCTGCTGGACAGGAATTGAAGAATTGTTAAAGACACTGCTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGTGTCTGCTGGACAGGAATTGAAGAATTGTTAAAGACACTGCTA  891

seq1  TGTCTCCCATTTGAACCAGTTATCTAGAATTGATCAGTGATATGTAAGTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCCATTTGAACCAGTTATCTAGAATTGATCAGTGATATGTAAGTC  941

seq1  TGCTGAATGCCGAGTGTCCCTTTAGGAGGGTCTTACTCTGAAGCCCCAGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAATGCCGAGTGTCCCTTTAGGAGGGTCTTACTCTGAAGCCCCAGC  991

seq1  TGACCTTAAACCCACAAGACTTGCCTACCTCTGCTTCTTGAATACTGGGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTAAACCCACAAGACTTGCCTACCTCTGCTTCTTGAATACTGGGA  1041

seq1  TTAAAGGCATATGCCACCACATTCAGCATGATTTAAAGTACTTGAATGTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGCATATGCCACCACATTCAGCATGATTTAAAGTACTTGAATGTT  1091

seq1  ATCACTTAGAATAGTTTTTGCTTCTATACCTGTAGGTATTCTACACCTGT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTAGAATAGTTTTTGCTTCTATACCTGTAGGTATTCTACACCTGT  1141

seq1  TTTGGGCAGAATTC  1161
      ||||||||||||||
seq2  TTTGGGCAGAATTC  1155