BAC Information

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BAC

Clone NameB6Ng01-116L13
Chromosome14 (Build37)
Map Location 72,262,779 - 72,438,090
singlet/doubletdoublet
Overlap genenone
Upstream geneGfra2, LOC100043132, LOC100043136, LOC668477
Downstream geneLOC668482, LOC675957, Fndc3a, LOC100043721, LOC100043723, LOC668487, LOC668489, Cysltr2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116L13.bB6Ng01-116L13.g
ACCDH921649DH921650
length2611,103
definitionDH921649|Mus musculus domesticus DNA, BAC clone: B6Ng01-116L13, 5' end.DH921650|Mus musculus domesticus DNA, BAC clone: B6Ng01-116L13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,262,779 - 72,263,039)(72,436,981 - 72,438,090)
sequence
gaattcaagtactttccagagataatgaatctccacacgagacccctaca
aagcacattcatccactcacagtctatagcacagaatgggttaggtagga
tcagtctagtacattagcctactccagcctctcaagcaccctctggaatt
ccttcttacaagatgagagaacaacaacctacaaacccatgcccagtctt
ttatgatgcttagttcgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgt
gtgtgtgtgtg
gaattccagaagtacctgagtcaggagggcacatatttaggtctcagtga
tgactgactataggaaagcaagtgattccttcaagagaacagatgattgc
tgatccagtcagttacccatcaccaaggatctcatgcaaggagagtaaac
atttttcctgggtcagcaaatcccgttgtagttctggttctaggcttgat
catcccggttcctcattctgtctaaagcacagaatcggggattgaaaact
aaatatgtgacatcagctgtggtgtcaacgccttcagaatgagatgggaa
ggtgtcgcgtccgctctcgaccagcaagaacgacacgaccaccagtcctt
ctaacagcagtttattcagtcctgattcttcttgtttatatctcccccga
accctgggcctctcactccttttatactctcatccacgcacagcaggcca
cgccgcctcaccaggcacgcagcttcagctaatcagggcagcaggggcat
atctccatcaaactggattcaccggtatcctggtgcacctgcgcagctct
caagatgtttgtggcttatatgaggaagtcaggtgcaagtcatacgactt
agctacagtccctgacgcctttgggactgccgccacacccgctcctaaca
ggaaggggtcagctttgagcctcctcagttccctggagtcacagagcgtt
ctgcagtgatgactgggtatgctatttcactgagcatgtagacaaggtgg
tagtttttaaaggaaaagaaggaacagagcaacagatctgaagatgtcac
tcccatacctctgaagacccagtcctccccaggactgacactcagcagag
tcaccgttgccacaagttaataaacacatttctctccttgtctgtgctca
ctctttttactggcgtggcaatttgaagtccggaatagcaccttcaggac
acggggctgagacaagagggaatgtatttatgttcacatttacaagtctt
tcttctcctgtgacagcagggctgaagatgccaagatgaaagctctgccc
acattgctggcaggctttgtgtatcttcttgtgaatgtaccagactgact
gct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_72262779_72263039
seq2: B6Ng01-116L13.b_43_303

seq1  GAATTCAAGTACTTTCCAGAGATAATGAATCTCCACACGAGACCCCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTACTTTCCAGAGATAATGAATCTCCACACGAGACCCCTACA  50

seq1  AAGCACATTCATCCACTCACAGTCTATAGCACAGAATGGGTTAGGTAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACATTCATCCACTCACAGTCTATAGCACAGAATGGGTTAGGTAGGA  100

seq1  TCAGTCTAGTACATTAGCCTACTCCAGCCTCTCAAGCACCCTCTGGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTAGTACATTAGCCTACTCCAGCCTCTCAAGCACCCTCTGGAATT  150

seq1  CCTTCTTACAAGATGAGAGAACAACAACCTACAAACCCATGCCCAGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTACAAGATGAGAGAACAACAACCTACAAACCCATGCCCAGTCTT  200

seq1  TTATGATGCTTAGTTCGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATGCTTAGTTCGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGT  250

seq1  GTGTGTGTGTG  261
      |||||||||||
seq2  GTGTGTGTGTG  261

seq1: chr14_72436981_72438090
seq2: B6Ng01-116L13.g_67_1169 (reverse)

seq1  AGCAGTCAGTCTGGTCACAATCACCAAGAAGATACAACAAAGCCTGCCAG  50
      ||||||||||||||| ||| ||| ||||||||||| ||||||||||||| 
seq2  AGCAGTCAGTCTGGT-ACATTCA-CAAGAAGATAC-ACAAAGCCTGCCA-  46

seq1  GCAATGTGGGGCAGGAGCTTTCATCTTGGCATCTGTCAGCCCTGCTGTCA  100
      ||||||| ||||| |||||||||||||||||||| |||||||||||||||
seq2  GCAATGT-GGGCA-GAGCTTTCATCTTGGCATCT-TCAGCCCTGCTGTCA  93

seq1  CAGGGGAAGACAGGCTTGTAAATGTGAACATAAATACATTCCCCTCTTGT  150
      |||| ||||| || |||||||||||||||||||||||||| |||||||||
seq2  CAGGAGAAGAAAGACTTGTAAATGTGAACATAAATACATT-CCCTCTTGT  142

seq1  CTCAGCCCCGTGTCCTG-AGGTGCTATTCCGGACTTCAAATTGCCACGCC  199
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTCAGCCCCGTGTCCTGAAGGTGCTATTCCGGACTTCAAATTGCCACGCC  192

seq1  AGTAAAAAGAGGTGAGCACAGACAAGGAAGAG-AATGTGTTTATTAACTT  248
      |||||||||| |||||||||||||||| |||| |||||||||||||||||
seq2  AGTAAAAAGA-GTGAGCACAGACAAGG-AGAGAAATGTGTTTATTAACTT  240

seq1  GTGGCAACGGTGACTCTGCTGAGTGTCAGTCCTGGGGAGGACTGGGTCTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAACGGTGACTCTGCTGAGTGTCAGTCCTGGGGAGGACTGGGTCTT  290

seq1  CAGAGGTATGGGAGTGACATCTTCAGATCTGTTGCTCTGTTCCTTCTTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTATGGGAGTGACATCTTCAGATCTGTTGCTCTGTTCCTTCTTTT  340

seq1  CCTTTAAGAACTACCACCTTGTCTACATGCTCAGTGAAATAGCATACCCA  398
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAAACTACCACCTTGTCTACATGCTCAGTGAAATAGCATACCCA  390

seq1  GTCATCACTGCAGAACGCTCTGTGACTCCAGGGAACTGAGGAGGCTC-AA  447
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTCATCACTGCAGAACGCTCTGTGACTCCAGGGAACTGAGGAGGCTCAAA  440

seq1  GCTGACCCCTTCCTGTTAGGAGCGGGTGTGGCGGCAGTCCCAAAGGCGTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACCCCTTCCTGTTAGGAGCGGGTGTGGCGGCAGTCCCAAAGGCGTC  490

seq1  AGGGACTGTAGCTAAGTCGTATGACTTGCACCTGACTTCCTCATATAAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTGTAGCTAAGTCGTATGACTTGCACCTGACTTCCTCATATAAGC  540

seq1  CACAAACATCTTGAGAGCTGCGCAGGTGCACCAGGATACCGGTGAATCCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACATCTTGAGAGCTGCGCAGGTGCACCAGGATACCGGTGAATCCA  590

seq1  GTTTGATGGAGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTGCGTGCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATGGAGATATGCCCCTGCTGCCCTGATTAGCTGAAGCTGCGTGCC  640

seq1  TGGTGAGGCGGCGTGGCCTGCTGTGCGTGGATGAGAGTATAAAAGGAGTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGGCGGCGTGGCCTGCTGTGCGTGGATGAGAGTATAAAAGGAGTG  690

seq1  AGAGGCCCAGGGTTCGGGGGAGATATAAACAAGAAGAATCAGGACTGAAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCCAGGGTTCGGGGGAGATATAAACAAGAAGAATCAGGACTGAAT  740

seq1  AAACTGCTGTTAGAAGGACTGGTGGTCGTGTCGTTCTTGCTGGTCGAGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCTGTTAGAAGGACTGGTGGTCGTGTCGTTCTTGCTGGTCGAGAG  790

seq1  CGGACGCGACACCTTCCCATCTCATTCTGAAGGCGTTGACACCACAGCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACGCGACACCTTCCCATCTCATTCTGAAGGCGTTGACACCACAGCTG  840

seq1  ATGTCACATATTTAGTTTTCAATCCCCGATTCTGTGCTTTAGACAGAATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACATATTTAGTTTTCAATCCCCGATTCTGTGCTTTAGACAGAATG  890

seq1  AGGAACCGGGATGATCAAGCCTAGAACCAGAACTACAACGGGATTTGCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCGGGATGATCAAGCCTAGAACCAGAACTACAACGGGATTTGCTG  940

seq1  ACCCAGGAAAAATGTTTACTCTCCTTGCATGAGATCCTTGGTGATGGGTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGAAAAATGTTTACTCTCCTTGCATGAGATCCTTGGTGATGGGTA  990

seq1  ACTGACTGGATCAGCAATCATCTGTTCTCTTGAAGGAATCACTTGCTTTC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACTGGATCAGCAATCATCTGTTCTCTTGAAGGAATCACTTGCTTTC  1040

seq1  CTATAGTCAGTCATCACTGAGACCTAAATATGTGCCCTCCTGACTCAGGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTCAGTCATCACTGAGACCTAAATATGTGCCCTCCTGACTCAGGT  1090

seq1  ACTTCTGGAATTC  1110
      |||||||||||||
seq2  ACTTCTGGAATTC  1103